RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 RPS10-NUDT3A0A1W2PQS6 291 aa9.07□□□□□ -0.96
HDAC6-217ENST00000469223 FNDC10F2Z333 226 aa9.07□□□□□ -0.96
HDAC6-217ENST00000469223 MPDU1O75352 247 aa9.07□□□□□ -0.96
HDAC6-217ENST00000469223 TMEM50AO95807 157 aa9.07□□□□□ -0.96
HDAC6-217ENST00000469223 SEC11BP0C7V7 166 aa9.07□□□□□ -0.96
HDAC6-217ENST00000469223 DLK1P80370 383 aa9.07□□□□□ -0.96
HDAC6-217ENST00000469223 IFITM2Q01629 132 aa9.07□□□□□ -0.96
HDAC6-217ENST00000469223 C2orf83Q53S99 150 aa9.07□□□□□ -0.96
HDAC6-217ENST00000469223 SPINK9Q5DT21 86 aa9.07□□□□□ -0.96
HDAC6-217ENST00000469223 RPL7L1Q6DKI1 246 aaKnown RBP9.07□□□□□ -0.96
HDAC6-217ENST00000469223 ZNF709Q8N972 641 aa9.07□□□□□ -0.96
HDAC6-217ENST00000469223 RNASEH2CQ8TDP1 164 aaKnown RBP9.07□□□□□ -0.96
HDAC6-217ENST00000469223 IGHV3-35A0A0C4DH35 117 aa9.06□□□□□ -0.96
HDAC6-217ENST00000469223 NPIPB5A8MRT5 1133 aa9.06□□□□□ -0.96
HDAC6-217ENST00000469223 UMAD1C9J7I0 102 aa9.06□□□□□ -0.96
HDAC6-217ENST00000469223 SCGB2A1O75556 95 aa9.06□□□□□ -0.96
HDAC6-217ENST00000469223 C12orf74Q32Q52 190 aa9.06□□□□□ -0.96
HDAC6-217ENST00000469223 C10orf55Q5SWW7 151 aa9.06□□□□□ -0.96
HDAC6-217ENST00000469223 ALKAL2Q6UX46 152 aa9.06□□□□□ -0.96
HDAC6-217ENST00000469223 GINS3Q9BRX5 216 aa9.06□□□□□ -0.96
HDAC6-217ENST00000469223 CYTL1Q9NRR1 136 aa9.06□□□□□ -0.96
HDAC6-217ENST00000469223 TEX22C9J3V5 150 aa9.05□□□□□ -0.96
HDAC6-217ENST00000469223 TEX46H3BTG2 121 aa9.05□□□□□ -0.96
HDAC6-217ENST00000469223 CRYGCP07315 174 aa9.05□□□□□ -0.96
HDAC6-217ENST00000469223 OR13C7P0DN81 318 aa9.05□□□□□ -0.96
HDAC6-217ENST00000469223 DEFA4P12838 97 aa9.05□□□□□ -0.96
HDAC6-217ENST00000469223 HIST1H1BP16401 226 aaKnown RBP9.05□□□□□ -0.96
HDAC6-217ENST00000469223 KRTAP10-2P60368 255 aa9.05□□□□□ -0.96
HDAC6-217ENST00000469223 RAB2AP61019 212 aa9.05□□□□□ -0.96
HDAC6-217ENST00000469223 C6orf223Q8N319 242 aa9.05□□□□□ -0.96
HDAC6-217ENST00000469223 ZNF114Q8NC26 417 aa9.05□□□□□ -0.96
HDAC6-217ENST00000469223 FRZBQ92765 325 aa9.05□□□□□ -0.96
HDAC6-217ENST00000469223 THYN1Q9P016 225 aa9.05□□□□□ -0.96
HDAC6-217ENST00000469223 UFC1Q9Y3C8 167 aa9.05□□□□□ -0.96
HDAC6-217ENST00000469223 SMCO3A2RU48 225 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 C15orf62A8K5M9 175 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 MBP02144 154 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 MIFP14174 115 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 MYOD1P15172 320 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 GPX4P36969 197 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-217ENST00000469223 BLOC1S1P78537 153 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 SERF2P84101 59 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 KLK9Q2XQG4 91 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 CLLU1Q5K131 121 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 AKR1C8PQ5T2L2 129 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 DPPA3Q6W0C5 159 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 HSD17B11Q8NBQ5 300 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 OR1P1Q8NH06 330 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 TMED6Q8WW62 240 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 SLC35E1Q96K37 410 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 PSMG3Q9BT73 122 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-217ENST00000469223 ARV1Q9H2C2 271 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 NPVFQ9HCQ7 196 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 KLK9Q9UKQ9 250 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 TIMM9Q9Y5J7 89 aa9.04□□□□□ -0.96
HDAC6-217ENST00000469223 UBE2L5PA0A1B0GUS4 154 aa9.03□□□□□ -0.96
HDAC6-217ENST00000469223 SPP1P10451 314 aa9.03□□□□□ -0.96
HDAC6-217ENST00000469223 TFPI2P48307 235 aa9.03□□□□□ -0.96
HDAC6-217ENST00000469223 ELLP55199 621 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-217ENST00000469223 AKR1C1Q04828 323 aa9.03□□□□□ -0.96
HDAC6-217ENST00000469223 VWC2Q2TAL6 325 aa9.03□□□□□ -0.96
HDAC6-217ENST00000469223 BSXQ3C1V8 233 aa9.03□□□□□ -0.96
HDAC6-217ENST00000469223 RNF212Q495C1 297 aa9.03□□□□□ -0.96
HDAC6-217ENST00000469223 OR2G3Q8NGZ4 309 aa9.03□□□□□ -0.96
HDAC6-217ENST00000469223 EEF1AKMT3Q96AZ1 226 aa9.03□□□□□ -0.96
HDAC6-217ENST00000469223 SAT2Q96F10 170 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-217ENST00000469223 WDR61Q9GZS3 305 aaKnown RBP9.03□□□□□ -0.96
HDAC6-217ENST00000469223 PFDN2Q9UHV9 154 aa9.03□□□□□ -0.96
HDAC6-217ENST00000469223 MFSD2BA6NFX1 497 aa9.02□□□□□ -0.97
HDAC6-217ENST00000469223 E7EUB6 86 aa9.02□□□□□ -0.97
HDAC6-217ENST00000469223 CFDP00746 253 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-217ENST00000469223 FABP1P07148 127 aa9.02□□□□□ -0.97
HDAC6-217ENST00000469223 RNASE2P10153 161 aaKnown RBP9.02□□□□□ -0.97
HDAC6-217ENST00000469223 FGF7P21781 194 aa9.02□□□□□ -0.97
HDAC6-217ENST00000469223 GPR183P32249 361 aa9.02□□□□□ -0.97
HDAC6-217ENST00000469223 OPRK1P41145 380 aa9.02□□□□□ -0.97
HDAC6-217ENST00000469223 TEPPQ6URK8 271 aa9.02□□□□□ -0.97
HDAC6-217ENST00000469223 LYPD1Q8N2G4 141 aa9.02□□□□□ -0.97
HDAC6-217ENST00000469223 TMEM190Q8WZ59 177 aa9.02□□□□□ -0.97
HDAC6-217ENST00000469223 FANCD2OSQ96PS1 177 aa9.02□□□□□ -0.97
HDAC6-217ENST00000469223 X6R8D5 127 aa9.02□□□□□ -0.97
HDAC6-217ENST00000469223 LRP1Q07954 4544 aaKnown RBP9.01□□□□□ -0.97
HDAC6-217ENST00000469223 A0A1B0GW64 132 aa9.01□□□□□ -0.97
HDAC6-217ENST00000469223 IGLC7A0M8Q6 106 aa9.01□□□□□ -0.97
HDAC6-217ENST00000469223 PMS2P5A8MQ11 134 aa9.01□□□□□ -0.97
HDAC6-217ENST00000469223 ZNF705EA8MWA4 302 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-217ENST00000469223 AREGP15514 252 aa9.01□□□□□ -0.97
HDAC6-217ENST00000469223 ATP6V0CP27449 155 aa9.01□□□□□ -0.97
HDAC6-217ENST00000469223 CAMLGP49069 296 aa9.01□□□□□ -0.97
HDAC6-217ENST00000469223 SULT1A2P50226 295 aa9.01□□□□□ -0.97
HDAC6-217ENST00000469223 WT1-ASQ06250 92 aa9.01□□□□□ -0.97
HDAC6-217ENST00000469223 OR10W1Q8NGF6 305 aa9.01□□□□□ -0.97
HDAC6-217ENST00000469223 CXorf58Q96LI9 332 aa9.01□□□□□ -0.97
HDAC6-217ENST00000469223 WFDC1Q9HC57 220 aa9.01□□□□□ -0.97
HDAC6-217ENST00000469223 F11RQ9Y624 299 aaKnown RBP9.01□□□□□ -0.97
HDAC6-217ENST00000469223 IGLV11-55A0A075B6I3 123 aa9□□□□□ -0.97
HDAC6-217ENST00000469223 TRBV7-1A0A0A6YYK4 115 aa9□□□□□ -0.97
HDAC6-217ENST00000469223 BSCL2Q96G97 398 aaPredicted RBP9□□□□□ -0.97
HDAC6-217ENST00000469223 DAZ1Q9NQZ3 744 aaKnown RBP9□□□□□ -0.97
HDAC6-217ENST00000469223 MDFICQ9P1T7 246 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms