RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 INSIG2Q9Y5U4 225 aa12.58□□□□□ -0.39
TSPAN4-211ENST00000468468 IGHV2-26A0A0B4J1V2 119 aa12.58□□□□□ -0.4
TSPAN4-211ENST00000468468 FAM90A27PA6NNH2 459 aa12.58□□□□□ -0.4
TSPAN4-211ENST00000468468 LTAP01374 205 aa12.58□□□□□ -0.4
TSPAN4-211ENST00000468468 Q56UQ5 140 aa12.58□□□□□ -0.4
TSPAN4-211ENST00000468468 PGLYRP4Q96LB8 373 aa12.58□□□□□ -0.4
TSPAN4-211ENST00000468468 ATRXP46100 2492 aa12.58□□□□□ -0.4
TSPAN4-211ENST00000468468 IGHV1-69-2A0A0G2JMI3 117 aa12.58□□□□□ -0.4
TSPAN4-211ENST00000468468 CIDEAO60543 219 aa12.58□□□□□ -0.4
TSPAN4-211ENST00000468468 GRNP28799 593 aaKnown RBP12.58□□□□□ -0.4
TSPAN4-211ENST00000468468 RIPPLY3P57055 190 aa12.58□□□□□ -0.4
TSPAN4-211ENST00000468468 SSX8Q7RTT4 187 aa12.58□□□□□ -0.4
TSPAN4-211ENST00000468468 LINC01560Q8TB33 94 aa12.58□□□□□ -0.4
TSPAN4-211ENST00000468468 GTSF1Q8WW33 167 aa12.58□□□□□ -0.4
TSPAN4-211ENST00000468468 DAZAP1Q96EP5 407 aaKnown RBP12.58□□□□□ -0.4
TSPAN4-211ENST00000468468 CSMD1Q96PZ7 3565 aa12.57□□□□□ -0.4
TSPAN4-211ENST00000468468 C19orf71A6NCJ1 209 aa12.57□□□□□ -0.4
TSPAN4-211ENST00000468468 PLP1P60201 277 aa12.57□□□□□ -0.4
TSPAN4-211ENST00000468468 LYZP61626 148 aa12.57□□□□□ -0.4
TSPAN4-211ENST00000468468 OR8B3Q8NGG8 313 aa12.57□□□□□ -0.4
TSPAN4-211ENST00000468468 OR8B2Q96RD0 313 aa12.57□□□□□ -0.4
TSPAN4-211ENST00000468468 HIGD1AQ9Y241 93 aa12.57□□□□□ -0.4
TSPAN4-211ENST00000468468 F11RQ9Y624 299 aaKnown RBP12.57□□□□□ -0.4
TSPAN4-211ENST00000468468 IGHV1-3A0A0C4DH29 117 aa12.57□□□□□ -0.4
TSPAN4-211ENST00000468468 CD24P25063 80 aa12.57□□□□□ -0.4
TSPAN4-211ENST00000468468 TSPOP30536 169 aa12.57□□□□□ -0.4
TSPAN4-211ENST00000468468 PPP1R27Q86WC6 154 aa12.57□□□□□ -0.4
TSPAN4-211ENST00000468468 ZNF492Q9P255 531 aa12.57□□□□□ -0.4
TSPAN4-211ENST00000468468 ABCA1O95477 2261 aa12.57□□□□□ -0.4
TSPAN4-211ENST00000468468 FOXA3P55318 350 aaPredicted RBP12.56□□□□□ -0.4
TSPAN4-211ENST00000468468 CT83Q5H943 113 aa12.56□□□□□ -0.4
TSPAN4-211ENST00000468468 TNFRSF14Q92956 283 aa12.56□□□□□ -0.4
TSPAN4-211ENST00000468468 URB1-AS1Q96HZ7 61 aa12.56□□□□□ -0.4
TSPAN4-211ENST00000468468 NBASA2RRP1 2371 aa12.56□□□□□ -0.4
TSPAN4-211ENST00000468468 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.56□□□□□ -0.4
TSPAN4-211ENST00000468468 C2orf70A6NJV1 201 aa12.56□□□□□ -0.4
TSPAN4-211ENST00000468468 TEX22C9J3V5 150 aa12.56□□□□□ -0.4
TSPAN4-211ENST00000468468 IGLV1-47P01700 117 aa12.56□□□□□ -0.4
TSPAN4-211ENST00000468468 UCNP55089 124 aa12.56□□□□□ -0.4
TSPAN4-211ENST00000468468 FBXL15Q9H469 300 aa12.56□□□□□ -0.4
TSPAN4-211ENST00000468468 NGBQ9NPG2 151 aa12.56□□□□□ -0.4
TSPAN4-211ENST00000468468 RALYQ9UKM9 306 aaKnown RBP12.56□□□□□ -0.4
TSPAN4-211ENST00000468468 KIR3DL3Q8N743 410 aa12.55□□□□□ -0.4
TSPAN4-211ENST00000468468 CLEC5AQ9NY25 188 aa12.55□□□□□ -0.4
TSPAN4-211ENST00000468468 TACC2O95359 2948 aa12.55□□□□□ -0.4
TSPAN4-211ENST00000468468 TRAV9-2A0A087WT02 112 aa12.55□□□□□ -0.4
TSPAN4-211ENST00000468468 TRAV8-1A0A0A6YYK1 113 aa12.55□□□□□ -0.4
TSPAN4-211ENST00000468468 BUB1B-PAK6H3BSN5 160 aa12.55□□□□□ -0.4
TSPAN4-211ENST00000468468 SOX21Q9Y651 276 aaPredicted RBP12.55□□□□□ -0.4
TSPAN4-211ENST00000468468 SH2D7A6NKC9 451 aaPredicted RBP12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 HSBP1L1C9JCN9 74 aa12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 LYNX1G3V0Z9 82 aa12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 CCL21O00585 134 aa12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 TOX4O94842 621 aa12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 IGLC1P0CG04 106 aa12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 LYNX1P0DP58 116 aa12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 PAX2Q02962 417 aa12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 CDSNQ15517 529 aa12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 RBPMS2Q6ZRY4 209 aaKnown RBP12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 RBP4P02753 201 aa12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 COX7A1P24310 79 aa12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 FAM162BQ5T6X4 162 aa12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 EXOC3-AS1Q8N2X6 119 aa12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 CIARTQ8N365 385 aaPredicted RBP12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 CLUHP3Q96NS8 147 aa12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 SLC25A39Q9BZJ4 359 aaPredicted RBP12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 OTORQ9NRC9 128 aa12.54□□□□□ -0.4
TSPAN4-211ENST00000468468 SPATA12Q7Z6I5 190 aa12.53□□□□□ -0.4
TSPAN4-211ENST00000468468 Q86TA4 180 aa12.53□□□□□ -0.4
TSPAN4-211ENST00000468468 SRSF12Q8WXF0 261 aaKnown RBP12.53□□□□□ -0.4
TSPAN4-211ENST00000468468 ZC2HC1AQ96GY0 325 aa12.53□□□□□ -0.4
TSPAN4-211ENST00000468468 GFRA4Q9GZZ7 299 aa12.53□□□□□ -0.4
TSPAN4-211ENST00000468468 TRAV30A0A087WSZ9 112 aa12.53□□□□□ -0.4
TSPAN4-211ENST00000468468 COL8A1P27658 744 aa12.53□□□□□ -0.4
TSPAN4-211ENST00000468468 APOBEC3AP31941 199 aaPredicted RBP12.53□□□□□ -0.4
TSPAN4-211ENST00000468468 KLRB1Q12918 225 aa12.53□□□□□ -0.4
TSPAN4-211ENST00000468468 GOLT1AQ6ZVE7 132 aa12.53□□□□□ -0.4
TSPAN4-211ENST00000468468 S100A7AQ86SG5 101 aa12.53□□□□□ -0.4
TSPAN4-211ENST00000468468 PRNTQ86SH4 94 aa12.53□□□□□ -0.4
TSPAN4-211ENST00000468468 RASL11BQ9BPW5 248 aa12.53□□□□□ -0.4
TSPAN4-211ENST00000468468 CD3EP07766 207 aa12.52□□□□□ -0.4
TSPAN4-211ENST00000468468 IGLL1P15814 213 aa12.52□□□□□ -0.4
TSPAN4-211ENST00000468468 PLGLAQ15195 96 aa12.52□□□□□ -0.4
TSPAN4-211ENST00000468468 RPEQ96AT9 228 aa12.52□□□□□ -0.4
TSPAN4-211ENST00000468468 TMEM70Q9BUB7 260 aa12.52□□□□□ -0.4
TSPAN4-211ENST00000468468 I3L2K1 104 aa12.52□□□□□ -0.41
TSPAN4-211ENST00000468468 TMEM14CQ9P0S9 112 aa12.52□□□□□ -0.41
TSPAN4-211ENST00000468468 CHEK1O14757 476 aa12.52□□□□□ -0.41
TSPAN4-211ENST00000468468 GOSR1O95249 250 aa12.52□□□□□ -0.41
TSPAN4-211ENST00000468468 Q71RC1 249 aaPredicted RBP12.52□□□□□ -0.41
TSPAN4-211ENST00000468468 SELENOKQ9Y6D0 94 aa12.52□□□□□ -0.41
TSPAN4-211ENST00000468468 NPIPB6E9PJ23 425 aa12.51□□□□□ -0.41
TSPAN4-211ENST00000468468 FAM120AOSQ5T036 256 aa12.51□□□□□ -0.41
TSPAN4-211ENST00000468468 MRPS16Q9Y3D3 137 aaKnown RBP12.51□□□□□ -0.41
TSPAN4-211ENST00000468468 CHD8Q9HCK8 2581 aa12.51□□□□□ -0.41
TSPAN4-211ENST00000468468 PPIAL4CA0A0B4J2A2 164 aa12.51□□□□□ -0.41
TSPAN4-211ENST00000468468 OR2T8A6NH00 312 aa12.51□□□□□ -0.41
TSPAN4-211ENST00000468468 B9A039 149 aa12.51□□□□□ -0.41
TSPAN4-211ENST00000468468 SAP30O75446 220 aa12.51□□□□□ -0.41
TSPAN4-211ENST00000468468 IGLV2-11P01706 119 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms