RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 DEFB4AO15263 64 aa13.86□□□□□ -0.19
COL7A1-207ENST00000467985 METTL15P1P0C7V9 234 aa13.86□□□□□ -0.19
COL7A1-207ENST00000467985 PSMB3P49720 205 aa13.86□□□□□ -0.19
COL7A1-207ENST00000467985 PAX9P55771 341 aa13.86□□□□□ -0.19
COL7A1-207ENST00000467985 CSNK1G2-AS1Q8NCQ2 148 aa13.86□□□□□ -0.19
COL7A1-207ENST00000467985 BPIFCQ8NFQ6 507 aa13.86□□□□□ -0.19
COL7A1-207ENST00000467985 SLC25A31Q9H0C2 315 aa13.86□□□□□ -0.19
COL7A1-207ENST00000467985 LYRM2Q9NU23 88 aaPredicted RBP13.86□□□□□ -0.19
COL7A1-207ENST00000467985 FXYD6-FXYD2A0A087WZ82 144 aa13.85□□□□□ -0.19
COL7A1-207ENST00000467985 IGHV4-28A0A0C4DH34 117 aa13.85□□□□□ -0.19
COL7A1-207ENST00000467985 FAM24AA6NFZ4 105 aa13.85□□□□□ -0.19
COL7A1-207ENST00000467985 AKR1C1Q04828 323 aa13.85□□□□□ -0.19
COL7A1-207ENST00000467985 OR10P1Q8NGE3 313 aa13.85□□□□□ -0.19
COL7A1-207ENST00000467985 CLEC5AQ9NY25 188 aa13.85□□□□□ -0.19
COL7A1-207ENST00000467985 C11orf94C9JXX5 98 aa13.84□□□□□ -0.19
COL7A1-207ENST00000467985 H0YIZ8 118 aa13.84□□□□□ -0.19
COL7A1-207ENST00000467985 ISLRO14498 428 aa13.84□□□□□ -0.19
COL7A1-207ENST00000467985 GALR1P47211 349 aa13.84□□□□□ -0.19
COL7A1-207ENST00000467985 MEOX2P50222 304 aa13.84□□□□□ -0.19
COL7A1-207ENST00000467985 TCTAP57738 103 aa13.84□□□□□ -0.19
COL7A1-207ENST00000467985 SPATA31B1PQ5VZV4 182 aa13.84□□□□□ -0.19
COL7A1-207ENST00000467985 TMEM14EPQ6UXP3 125 aa13.84□□□□□ -0.19
COL7A1-207ENST00000467985 ACOT7LQ6ZUV0 252 aa13.84□□□□□ -0.19
COL7A1-207ENST00000467985 TMEM144Q7Z5S9 345 aa13.84□□□□□ -0.19
COL7A1-207ENST00000467985 LINC00052Q96N35 136 aa13.84□□□□□ -0.19
COL7A1-207ENST00000467985 X6R8D5 127 aa13.84□□□□□ -0.19
COL7A1-207ENST00000467985 SMCO3A2RU48 225 aa13.83□□□□□ -0.2
COL7A1-207ENST00000467985 SMLR1H3BR10 107 aa13.83□□□□□ -0.2
COL7A1-207ENST00000467985 CST7O76096 145 aa13.83□□□□□ -0.2
COL7A1-207ENST00000467985 RBMY1A1P0DJD3 496 aaKnown RBP13.83□□□□□ -0.2
COL7A1-207ENST00000467985 RBMY1CP0DJD4 496 aa13.83□□□□□ -0.2
COL7A1-207ENST00000467985 HBG1P69891 147 aa13.83□□□□□ -0.2
COL7A1-207ENST00000467985 HBG2P69892 147 aa13.83□□□□□ -0.2
COL7A1-207ENST00000467985 RBMY1FQ15415 496 aaKnown RBP13.83□□□□□ -0.2
COL7A1-207ENST00000467985 FOXI2Q6ZQN5 318 aa13.83□□□□□ -0.2
COL7A1-207ENST00000467985 TMEM252Q8N6L7 170 aa13.83□□□□□ -0.2
COL7A1-207ENST00000467985 C2CD4CQ8TF44 421 aa13.83□□□□□ -0.2
COL7A1-207ENST00000467985 CLUHP3Q96NS8 147 aa13.83□□□□□ -0.2
COL7A1-207ENST00000467985 GPR82Q96P67 336 aa13.83□□□□□ -0.2
COL7A1-207ENST00000467985 RNF126Q9BV68 326 aa13.83□□□□□ -0.2
COL7A1-207ENST00000467985 SAV1Q9H4B6 383 aaPredicted RBP13.83□□□□□ -0.2
COL7A1-207ENST00000467985 C11orf1Q9H5F2 150 aa13.83□□□□□ -0.2
COL7A1-207ENST00000467985 IGSF23A1L1A6 192 aa13.82□□□□□ -0.2
COL7A1-207ENST00000467985 SOCS3O14543 225 aa13.82□□□□□ -0.2
COL7A1-207ENST00000467985 SULT1A1P50225 295 aa13.82□□□□□ -0.2
COL7A1-207ENST00000467985 INO80EQ8NBZ0 244 aaPredicted RBP13.82□□□□□ -0.2
COL7A1-207ENST00000467985 TMEM147Q9BVK8 224 aa13.82□□□□□ -0.2
COL7A1-207ENST00000467985 XCL2Q9UBD3 114 aa13.82□□□□□ -0.2
COL7A1-207ENST00000467985 ZNF98A6NK75 572 aa13.81□□□□□ -0.2
COL7A1-207ENST00000467985 ORM2P19652 201 aa13.81□□□□□ -0.2
COL7A1-207ENST00000467985 RPL12P30050 165 aaKnown RBP13.81□□□□□ -0.2
COL7A1-207ENST00000467985 SLC38A11Q08AI6 406 aa13.81□□□□□ -0.2
COL7A1-207ENST00000467985 Q5BKY6 102 aa13.81□□□□□ -0.2
COL7A1-207ENST00000467985 LGALS9CQ6DKI2 356 aa13.81□□□□□ -0.2
COL7A1-207ENST00000467985 ZNF546Q86UE3 836 aa13.81□□□□□ -0.2
COL7A1-207ENST00000467985 OR1B1Q8NGR6 318 aa13.81□□□□□ -0.2
COL7A1-207ENST00000467985 ST6GAL2Q96JF0 529 aa13.81□□□□□ -0.2
COL7A1-207ENST00000467985 SLC25A22Q9H936 323 aa13.81□□□□□ -0.2
COL7A1-207ENST00000467985 FNDC10F2Z333 226 aa13.8□□□□□ -0.2
COL7A1-207ENST00000467985 SELENOTP62341 195 aa13.8□□□□□ -0.2
COL7A1-207ENST00000467985 BAXQ07812 192 aa13.8□□□□□ -0.2
COL7A1-207ENST00000467985 EBLN2Q6P2I7 272 aa13.8□□□□□ -0.2
COL7A1-207ENST00000467985 S100A7AQ86SG5 101 aa13.8□□□□□ -0.2
COL7A1-207ENST00000467985 TCTE3Q8IZS6 198 aa13.8□□□□□ -0.2
COL7A1-207ENST00000467985 C16orf92Q96LL3 132 aa13.8□□□□□ -0.2
COL7A1-207ENST00000467985 RPRMQ9NS64 109 aa13.8□□□□□ -0.2
COL7A1-207ENST00000467985 BIRC6Q9NR09 4857 aa13.79□□□□□ -0.2
COL7A1-207ENST00000467985 KMT2AQ03164 3969 aa13.79□□□□□ -0.2
COL7A1-207ENST00000467985 GATA2P23769 480 aaPredicted RBP13.79□□□□□ -0.2
COL7A1-207ENST00000467985 HLA-DMBP28068 263 aa13.79□□□□□ -0.2
COL7A1-207ENST00000467985 S100A11P31949 105 aa13.79□□□□□ -0.2
COL7A1-207ENST00000467985 DLK1P80370 383 aa13.79□□□□□ -0.2
COL7A1-207ENST00000467985 GDF5OSQ5U4N7 250 aa13.79□□□□□ -0.2
COL7A1-207ENST00000467985 CYP2G1PQ6ZSU1 146 aa13.79□□□□□ -0.2
COL7A1-207ENST00000467985 RSG1Q9BU20 258 aa13.79□□□□□ -0.2
COL7A1-207ENST00000467985 SLC25A32Q9H2D1 315 aa13.79□□□□□ -0.2
COL7A1-207ENST00000467985 ELOA3CA0A087WX78 387 aaPredicted RBP13.78□□□□□ -0.2
COL7A1-207ENST00000467985 SMIM9A6NGZ8 99 aa13.78□□□□□ -0.2
COL7A1-207ENST00000467985 PMS2P5A8MQ11 134 aa13.78□□□□□ -0.2
COL7A1-207ENST00000467985 PFDN1O60925 122 aa13.78□□□□□ -0.2
COL7A1-207ENST00000467985 NHLH2Q02577 135 aa13.78□□□□□ -0.2
COL7A1-207ENST00000467985 TMEM182Q6ZP80 229 aaPredicted RBP13.78□□□□□ -0.2
COL7A1-207ENST00000467985 OR4B1Q8NGF8 309 aa13.78□□□□□ -0.2
COL7A1-207ENST00000467985 NEU1Q99519 415 aa13.78□□□□□ -0.2
COL7A1-207ENST00000467985 NPVFQ9HCQ7 196 aa13.78□□□□□ -0.2
COL7A1-207ENST00000467985 HSPB11Q9Y547 144 aa13.78□□□□□ -0.2
COL7A1-207ENST00000467985 TRAV10A0A0B4J240 114 aa13.77□□□□□ -0.21
COL7A1-207ENST00000467985 ARPC5O15511 151 aa13.77□□□□□ -0.21
COL7A1-207ENST00000467985 HYPMO75409 117 aa13.77□□□□□ -0.21
COL7A1-207ENST00000467985 IGKV3-20P01619 116 aa13.77□□□□□ -0.21
COL7A1-207ENST00000467985 CLINT1Q14677 625 aa13.77□□□□□ -0.21
COL7A1-207ENST00000467985 ZNF705AQ6ZN79 300 aaPredicted RBP13.77□□□□□ -0.21
COL7A1-207ENST00000467985 OR5C1Q8NGR4 320 aa13.77□□□□□ -0.21
COL7A1-207ENST00000467985 GGACTQ9BVM4 153 aa13.77□□□□□ -0.21
COL7A1-207ENST00000467985 RNF24Q9Y225 148 aa13.77□□□□□ -0.21
COL7A1-207ENST00000467985 HIGD1AQ9Y241 93 aa13.77□□□□□ -0.21
COL7A1-207ENST00000467985 A0A0J9YX75 114 aa13.76□□□□□ -0.21
COL7A1-207ENST00000467985 TMEM189A5PLL7 270 aa13.76□□□□□ -0.21
COL7A1-207ENST00000467985 DEFB1P60022 68 aa13.76□□□□□ -0.21
COL7A1-207ENST00000467985 PLP1P60201 277 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms