RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 NPY1RP25929 384 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 PPIFP30405 207 aaKnown RBP5.37□□□□□ -1.55
SCAF4-204ENST00000467731 TAS2R30P59541 319 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 RPL23AP62750 156 aaKnown RBP5.37□□□□□ -1.55
SCAF4-204ENST00000467731 TCTEX1D4Q5JR98 221 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 ZNF329Q86UD4 541 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 ZNF114Q8NC26 417 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 OR4C12Q96R67 309 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 WNT10AQ9GZT5 417 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 MRPL27Q9P0M9 148 aaKnown RBP5.37□□□□□ -1.55
SCAF4-204ENST00000467731 F11RQ9Y624 299 aaKnown RBP5.37□□□□□ -1.55
SCAF4-204ENST00000467731 RFNGQ9Y644 331 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 FAM24AA6NFZ4 105 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 C15orf62A8K5M9 175 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 ZNF705FA8MVS1 300 aaPredicted RBP5.37□□□□□ -1.55
SCAF4-204ENST00000467731 ZNF705DP0CH99 300 aaPredicted RBP5.37□□□□□ -1.55
SCAF4-204ENST00000467731 ZNF705BP0CI00 300 aaPredicted RBP5.37□□□□□ -1.55
SCAF4-204ENST00000467731 MFAP2P55001 183 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 TMEM183BQ1AE95 376 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 TDRG1Q3Y452 100 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 COX19Q49B96 90 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 C10orf99Q6UWK7 81 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 LINC01006Q8NI28 216 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 FAM110DQ8TAY7 271 aaPredicted RBP5.37□□□□□ -1.55
SCAF4-204ENST00000467731 SIGMAR1Q99720 223 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 ZNF580Q9UK33 172 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 LAMTOR2Q9Y2Q5 125 aa5.37□□□□□ -1.55
SCAF4-204ENST00000467731 STRAPQ9Y3F4 350 aaKnown RBP5.37□□□□□ -1.55
SCAF4-204ENST00000467731 GAGE12BA1L429 117 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 AZU1P20160 251 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 P2RY1P47900 373 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 CFHR3Q02985 330 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 C2orf83Q53S99 150 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 TMEM14EPQ6UXP3 125 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 PRIMA1Q86XR5 153 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 OR1N2Q8NGR9 330 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 ACY3Q96HD9 319 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 TPPP3Q9BW30 176 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 URGCP-MRPS24S4R325 110 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 TRRAPQ9Y4A5 3859 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 TRAV34A0A0B4J273 112 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 CST7O76096 145 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 PET117Q6UWS5 81 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 TMEM182Q6ZP80 229 aaPredicted RBP5.36□□□□□ -1.55
SCAF4-204ENST00000467731 TMEM252Q8N6L7 170 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 FANCD2OSQ96PS1 177 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 C16orf95Q9H693 158 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 ZNF355PQ9NSJ1 428 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 COL6A5A8TX70 2615 aa5.36□□□□□ -1.55
SCAF4-204ENST00000467731 IGSF23A1L1A6 192 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 PSMB11A5LHX3 300 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 HELTA6NFD8 242 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 PDE6DO43924 150 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 NDUFA7O95182 113 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 ESDP10768 282 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 RPL12P30050 165 aaKnown RBP5.35□□□□□ -1.55
SCAF4-204ENST00000467731 SUB1P53999 127 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCAF4-204ENST00000467731 ATP5IP56385 69 aaPredicted RBP5.35□□□□□ -1.55
SCAF4-204ENST00000467731 PMS2P11Q13670 270 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 ZNF343Q6P1L6 599 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 TEX43Q6ZNM6 134 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 LCNL1Q6ZST4 164 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 TMEM217Q8N7C4 229 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 LYPD6BQ8NI32 183 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 MS4A10Q96PG2 267 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 SLC35B3Q9H1N7 401 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 SLC45A2Q9UMX9 530 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 IGLV11-55A0A075B6I3 123 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 TRAV25A0A0B4J276 109 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 PMS2P5A8MQ11 134 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 IGLV1-40P01703 118 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 MDKP21741 143 aaPredicted RBP5.35□□□□□ -1.55
SCAF4-204ENST00000467731 SLC35B1P78383 322 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 EWSR1Q01844 656 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCAF4-204ENST00000467731 ARL16Q0P5N6 197 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 CENPVQ7Z7K6 275 aaPredicted RBP5.35□□□□□ -1.55
SCAF4-204ENST00000467731 KLHDC1Q8N7A1 406 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.35□□□□□ -1.55
SCAF4-204ENST00000467731 OR4F5Q8NH21 305 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 KLK15Q9H2R5 256 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 RNF114Q9Y508 228 aa5.35□□□□□ -1.55
SCAF4-204ENST00000467731 TRBV9A0A0B4J1U6 114 aa5.34□□□□□ -1.55
SCAF4-204ENST00000467731 IGHV3-21A0A0B4J1V1 117 aa5.34□□□□□ -1.55
SCAF4-204ENST00000467731 PRSS46E5RG02 174 aa5.34□□□□□ -1.55
SCAF4-204ENST00000467731 OR2J3O76001 311 aa5.34□□□□□ -1.55
SCAF4-204ENST00000467731 IGHV3-48P01763 117 aa5.34□□□□□ -1.55
SCAF4-204ENST00000467731 IGHG4P01861 327 aa5.34□□□□□ -1.55
SCAF4-204ENST00000467731 PSMB8P28062 276 aa5.34□□□□□ -1.55
SCAF4-204ENST00000467731 OPRK1P41145 380 aa5.34□□□□□ -1.55
SCAF4-204ENST00000467731 PVRIGQ6DKI7 326 aa5.34□□□□□ -1.55
SCAF4-204ENST00000467731 HAPLN4Q86UW8 402 aa5.34□□□□□ -1.55
SCAF4-204ENST00000467731 AQP10Q96PS8 301 aa5.34□□□□□ -1.55
SCAF4-204ENST00000467731 FNDC4Q9H6D8 234 aaPredicted RBP5.34□□□□□ -1.55
SCAF4-204ENST00000467731 GEMIN7Q9H840 131 aaKnown RBP5.34□□□□□ -1.55
SCAF4-204ENST00000467731 STAB1Q9NY15 2570 aa5.34□□□□□ -1.55
SCAF4-204ENST00000467731 WNK1Q9H4A3 2382 aa5.34□□□□□ -1.55
SCAF4-204ENST00000467731 ZNF727A8MUV8 499 aa5.34□□□□□ -1.55
SCAF4-204ENST00000467731 HAX1O00165 279 aa5.34□□□□□ -1.55
SCAF4-204ENST00000467731 SULT1A2P50226 295 aa5.34□□□□□ -1.55
SCAF4-204ENST00000467731 TPPP2P59282 170 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms