RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 ATP5L2Q7Z4Y8 100 aa11.12□□□□□ -0.63
BRAT1-203ENST00000467558 SERF1AO75920 110 aa11.11□□□□□ -0.63
BRAT1-203ENST00000467558 FOSL1P15407 271 aa11.11□□□□□ -0.63
BRAT1-203ENST00000467558 CNTFRP26992 372 aa11.11□□□□□ -0.63
BRAT1-203ENST00000467558 AMMECR1LQ6DCA0 310 aa11.11□□□□□ -0.63
BRAT1-203ENST00000467558 SLC25A34Q6PIV7 304 aa11.11□□□□□ -0.63
BRAT1-203ENST00000467558 A0A1W2PRX2 142 aa11.11□□□□□ -0.63
BRAT1-203ENST00000467558 ADMP35318 185 aa11.11□□□□□ -0.63
BRAT1-203ENST00000467558 COL5A1-AS1Q5SY13 56 aa11.11□□□□□ -0.63
BRAT1-203ENST00000467558 C8orf31Q8N9H6 132 aa11.11□□□□□ -0.63
BRAT1-203ENST00000467558 FAM223BA6NKX1 122 aa11.11□□□□□ -0.63
BRAT1-203ENST00000467558 FAM223AQ8IWN6 122 aa11.11□□□□□ -0.63
BRAT1-203ENST00000467558 SSBP4Q9BWG4 385 aaPredicted RBP11.11□□□□□ -0.63
BRAT1-203ENST00000467558 IGHV1-69DA0A0B4J2H0 117 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 NPIPB5A8MRT5 1133 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 IGHV1-69P01742 117 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 OR1N2Q8NGR9 330 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 GLMPQ8WWB7 406 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 CTSZQ9UBR2 303 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 IGF2RP11717 2491 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 C9JQL5 133 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 RPLP1P05386 114 aaKnown RBP11.1□□□□□ -0.63
BRAT1-203ENST00000467558 WT1-ASQ06250 92 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 C12orf54Q6X4T0 127 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 CBY3A6NI87 242 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 WISP2O76076 250 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 TCTAP57738 103 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 C9orf139Q6ZV77 190 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 DUX3Q96PT4 197 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 M0R3E3 92 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 ZNF414Q96IQ9 312 aa11.1□□□□□ -0.63
BRAT1-203ENST00000467558 F2Z2F3 143 aa11.09□□□□□ -0.63
BRAT1-203ENST00000467558 IGHV2-70P01814 119 aa11.09□□□□□ -0.63
BRAT1-203ENST00000467558 PPBPP02775 128 aa11.09□□□□□ -0.63
BRAT1-203ENST00000467558 TDGF1P3P51864 188 aa11.09□□□□□ -0.63
BRAT1-203ENST00000467558 SHANK2-AS3Q9BTD1 123 aa11.09□□□□□ -0.63
BRAT1-203ENST00000467558 C1orf122Q6ZSJ8 110 aa11.09□□□□□ -0.63
BRAT1-203ENST00000467558 ATOH7Q8N100 152 aa11.09□□□□□ -0.63
BRAT1-203ENST00000467558 FAM19A2Q8N3H0 131 aa11.09□□□□□ -0.63
BRAT1-203ENST00000467558 FAM110DQ8TAY7 271 aaPredicted RBP11.09□□□□□ -0.63
BRAT1-203ENST00000467558 SRRM4A7MD48 611 aaKnown RBP11.09□□□□□ -0.63
BRAT1-203ENST00000467558 ATP5LO75964 103 aa11.09□□□□□ -0.63
BRAT1-203ENST00000467558 YPEL3P61236 119 aaPredicted RBP11.09□□□□□ -0.63
BRAT1-203ENST00000467558 RNF151Q2KHN1 245 aa11.09□□□□□ -0.63
BRAT1-203ENST00000467558 PET117Q6UWS5 81 aa11.09□□□□□ -0.63
BRAT1-203ENST00000467558 IGKV2-40A0A087WW87 121 aaPredicted RBP11.08□□□□□ -0.63
BRAT1-203ENST00000467558 IGKV2D-40P01614 121 aaPredicted RBP11.08□□□□□ -0.63
BRAT1-203ENST00000467558 LEPP41159 167 aa11.08□□□□□ -0.63
BRAT1-203ENST00000467558 GTF2H5Q6ZYL4 71 aa11.08□□□□□ -0.63
BRAT1-203ENST00000467558 HAPLN4Q86UW8 402 aa11.08□□□□□ -0.63
BRAT1-203ENST00000467558 VPS25Q9BRG1 176 aa11.08□□□□□ -0.63
BRAT1-203ENST00000467558 PRUNE2Q8WUY3 3088 aa11.08□□□□□ -0.63
BRAT1-203ENST00000467558 C22orf46C9J442 243 aa11.08□□□□□ -0.64
BRAT1-203ENST00000467558 CD7P09564 240 aa11.08□□□□□ -0.64
BRAT1-203ENST00000467558 PDE6HQ13956 83 aa11.08□□□□□ -0.64
BRAT1-203ENST00000467558 SPRNQ5BIV9 151 aa11.08□□□□□ -0.64
BRAT1-203ENST00000467558 RNF223E7ERA6 249 aa11.08□□□□□ -0.64
BRAT1-203ENST00000467558 UBE2L6O14933 153 aa11.08□□□□□ -0.64
BRAT1-203ENST00000467558 ATP6V0E1O15342 81 aa11.08□□□□□ -0.64
BRAT1-203ENST00000467558 DIAPH2-AS1Q14236 149 aa11.08□□□□□ -0.64
BRAT1-203ENST00000467558 RUSC1-AS1Q66K80 236 aa11.08□□□□□ -0.64
BRAT1-203ENST00000467558 ZNF329Q86UD4 541 aa11.08□□□□□ -0.64
BRAT1-203ENST00000467558 PRRC2CQ9Y520 2896 aaKnown RBP11.08□□□□□ -0.64
BRAT1-203ENST00000467558 CEP295Q9C0D2 2601 aa11.08□□□□□ -0.64
BRAT1-203ENST00000467558 FBLN7Q53RD9 439 aa11.08□□□□□ -0.64
BRAT1-203ENST00000467558 LINC01587Q99440 93 aa11.08□□□□□ -0.64
BRAT1-203ENST00000467558 BPTFQ12830 3046 aa11.07□□□□□ -0.64
BRAT1-203ENST00000467558 UQCRFS1P47985 274 aa11.07□□□□□ -0.64
BRAT1-203ENST00000467558 C18orf15Q96N68 181 aa11.07□□□□□ -0.64
BRAT1-203ENST00000467558 NRN1Q9NPD7 142 aa11.07□□□□□ -0.64
BRAT1-203ENST00000467558 TLN1Q9Y490 2541 aaKnown RBP11.07□□□□□ -0.64
BRAT1-203ENST00000467558 UBE2CO00762 179 aa11.07□□□□□ -0.64
BRAT1-203ENST00000467558 ZNF138P52744 262 aa11.07□□□□□ -0.64
BRAT1-203ENST00000467558 TNFRSF18Q9Y5U5 241 aa11.07□□□□□ -0.64
BRAT1-203ENST00000467558 RASL11AQ6T310 242 aa11.07□□□□□ -0.64
BRAT1-203ENST00000467558 TPSG1Q9NRR2 321 aa11.07□□□□□ -0.64
BRAT1-203ENST00000467558 C7orf71A4D174 169 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 ZNF324O75467 553 aaPredicted RBP11.06□□□□□ -0.64
BRAT1-203ENST00000467558 ZNF25P17030 456 aaPredicted RBP11.06□□□□□ -0.64
BRAT1-203ENST00000467558 TRAV8-1A0A0A6YYK1 113 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 NDUFB8O95169 186 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 SRD5A1P18405 259 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 RPL13AP40429 203 aaKnown RBP11.06□□□□□ -0.64
BRAT1-203ENST00000467558 PSMB2P49721 201 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 CACNG7P62955 275 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 OR10J3Q5JRS4 329 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 PSMG4Q5JS54 123 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 LCN12Q6JVE5 192 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 C11orf44Q8N8P7 122 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 NDUFS7O75251 213 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 PSG3Q16557 428 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 C19orf54Q5BKX5 351 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 DMRTC2Q8IXT2 367 aaPredicted RBP11.06□□□□□ -0.64
BRAT1-203ENST00000467558 PIP4P2Q8N4L2 257 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 CSPG4Q6UVK1 2322 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 PPIFP30405 207 aaKnown RBP11.06□□□□□ -0.64
BRAT1-203ENST00000467558 NDPQ00604 133 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 ZNF726P1Q15940 193 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 Q8NA96 180 aa11.06□□□□□ -0.64
BRAT1-203ENST00000467558 LINC00614P0C842 121 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms