RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 CXCL8P10145 99 aa-0.13□□□□□ -2.43
SMC4-207ENST00000467263 SERPINB9P50453 376 aa-0.13□□□□□ -2.43
SMC4-207ENST00000467263 PIGPP57054 158 aa-0.13□□□□□ -2.43
SMC4-207ENST00000467263 RANP62826 216 aaKnown RBP-0.13□□□□□ -2.43
SMC4-207ENST00000467263 CDK6Q00534 326 aa-0.13□□□□□ -2.43
SMC4-207ENST00000467263 EDDM3AQ14507 147 aa-0.13□□□□□ -2.43
SMC4-207ENST00000467263 C1orf134Q5TEV5 83 aa-0.13□□□□□ -2.43
SMC4-207ENST00000467263 ZNF431Q8TF32 576 aaPredicted RBP-0.13□□□□□ -2.43
SMC4-207ENST00000467263 PBOV1Q9GZY1 135 aa-0.13□□□□□ -2.43
SMC4-207ENST00000467263 AESQ08117 197 aa-0.14□□□□□ -2.43
SMC4-207ENST00000467263 RRN3P1Q2M238 152 aa-0.14□□□□□ -2.43
SMC4-207ENST00000467263 SPINK6Q6UWN8 80 aa-0.14□□□□□ -2.43
SMC4-207ENST00000467263 YPEL2Q96QA6 119 aa-0.14□□□□□ -2.43
SMC4-207ENST00000467263 PTPRZ1P23471 2315 aaPredicted RBP-0.14□□□□□ -2.43
SMC4-207ENST00000467263 MYO5AQ9Y4I1 1855 aaKnown RBP-0.14□□□□□ -2.43
SMC4-207ENST00000467263 NCOA1Q15788 1441 aa-0.14□□□□□ -2.43
SMC4-207ENST00000467263 MGAMO43451 1857 aa-0.15□□□□□ -2.43
SMC4-207ENST00000467263 RPP14O95059 124 aaKnown RBP-0.15□□□□□ -2.43
SMC4-207ENST00000467263 CD14P08571 375 aa-0.15□□□□□ -2.43
SMC4-207ENST00000467263 HIST1H3AP68431 136 aa-0.15□□□□□ -2.43
SMC4-207ENST00000467263 H3F3AP84243 136 aa-0.15□□□□□ -2.43
SMC4-207ENST00000467263 RAB37Q96AX2 223 aa-0.15□□□□□ -2.43
SMC4-207ENST00000467263 MUCL1Q96DR8 90 aa-0.15□□□□□ -2.43
SMC4-207ENST00000467263 HRNRQ86YZ3 2850 aaPredicted RBP-0.16□□□□□ -2.43
SMC4-207ENST00000467263 OTOGQ6ZRI0 2925 aa-0.16□□□□□ -2.43
SMC4-207ENST00000467263 TRAV4A0A0B4J268 109 aa-0.16□□□□□ -2.44
SMC4-207ENST00000467263 M0R233 179 aa-0.16□□□□□ -2.44
SMC4-207ENST00000467263 ERP29P30040 261 aaKnown RBP-0.16□□□□□ -2.44
SMC4-207ENST00000467263 BCL2L15Q5TBC7 163 aa-0.16□□□□□ -2.44
SMC4-207ENST00000467263 OR52A1Q9UKL2 312 aa-0.16□□□□□ -2.44
SMC4-207ENST00000467263 BCL9O00512 1426 aa-0.16□□□□□ -2.44
SMC4-207ENST00000467263 IGF2RP11717 2491 aa-0.16□□□□□ -2.44
SMC4-207ENST00000467263 LOC285556D6RIA3 1793 aa-0.17□□□□□ -2.44
SMC4-207ENST00000467263 ADCY9O60503 1353 aa-0.17□□□□□ -2.44
SMC4-207ENST00000467263 DMBT1Q9UGM3 2413 aaPredicted RBP-0.17□□□□□ -2.44
SMC4-207ENST00000467263 TAX1BP3O14907 124 aa-0.17□□□□□ -2.44
SMC4-207ENST00000467263 MYL5Q02045 173 aa-0.17□□□□□ -2.44
SMC4-207ENST00000467263 TMEM97Q5BJF2 176 aa-0.17□□□□□ -2.44
SMC4-207ENST00000467263 FMN1Q68DA7 1419 aa-0.17□□□□□ -2.44
SMC4-207ENST00000467263 POP5Q969H6 163 aaKnown RBP-0.17□□□□□ -2.44
SMC4-207ENST00000467263 CCDC94Q9BW85 323 aaPredicted RBP-0.17□□□□□ -2.44
SMC4-207ENST00000467263 TPRP12270 2363 aaKnown RBP-0.17□□□□□ -2.44
SMC4-207ENST00000467263 SSPOA2VEC9 5147 aa-0.18□□□□□ -2.44
SMC4-207ENST00000467263 CCDC144AA2RUR9 1427 aa-0.18□□□□□ -2.44
SMC4-207ENST00000467263 ZNF727A8MUV8 499 aa-0.18□□□□□ -2.44
SMC4-207ENST00000467263 C17orf112F2Z3M2 114 aa-0.18□□□□□ -2.44
SMC4-207ENST00000467263 CST8O60676 142 aa-0.18□□□□□ -2.44
SMC4-207ENST00000467263 TCRBP04435 133 aa-0.18□□□□□ -2.44
SMC4-207ENST00000467263 FXYD6P3P58550 94 aa-0.18□□□□□ -2.44
SMC4-207ENST00000467263 LSM6P62312 80 aaKnown RBP-0.18□□□□□ -2.44
SMC4-207ENST00000467263 Q86TA4 180 aa-0.18□□□□□ -2.44
SMC4-207ENST00000467263 OR5AS1Q8N127 324 aa-0.18□□□□□ -2.44
SMC4-207ENST00000467263 OPTCQ9UBM4 332 aa-0.18□□□□□ -2.44
SMC4-207ENST00000467263 ZFYVE9O95405 1425 aa-0.19□□□□□ -2.44
SMC4-207ENST00000467263 A0A087WSZ3 146 aa-0.19□□□□□ -2.44
SMC4-207ENST00000467263 IGLV1-51P01701 117 aa-0.19□□□□□ -2.44
SMC4-207ENST00000467263 ATP5G3P48201 142 aa-0.19□□□□□ -2.44
SMC4-207ENST00000467263 FXYD4P59646 89 aa-0.19□□□□□ -2.44
SMC4-207ENST00000467263 UBE2BP63146 152 aa-0.19□□□□□ -2.44
SMC4-207ENST00000467263 PTRHD1Q6GMV3 140 aaKnown RBP-0.19□□□□□ -2.44
SMC4-207ENST00000467263 EIF5AL1Q6IS14 154 aaKnown RBP-0.19□□□□□ -2.44
SMC4-207ENST00000467263 PLAC4Q8WY50 150 aa-0.19□□□□□ -2.44
SMC4-207ENST00000467263 NPCDR1Q9BY65 106 aa-0.19□□□□□ -2.44
SMC4-207ENST00000467263 MYLKQ15746 1914 aa-0.19□□□□□ -2.44
SMC4-207ENST00000467263 RFX7Q2KHR2 1363 aa-0.19□□□□□ -2.44
SMC4-207ENST00000467263 CEBPGP53567 150 aa-0.2□□□□□ -2.44
SMC4-207ENST00000467263 QRFPP83859 136 aa-0.2□□□□□ -2.44
SMC4-207ENST00000467263 OTUD6BQ8N6M0 293 aa-0.2□□□□□ -2.44
SMC4-207ENST00000467263 OR10AG1Q8NH19 301 aa-0.2□□□□□ -2.44
SMC4-207ENST00000467263 GNPDA2Q8TDQ7 276 aa-0.2□□□□□ -2.44
SMC4-207ENST00000467263 RNF11Q9Y3C5 154 aa-0.2□□□□□ -2.44
SMC4-207ENST00000467263 NCOR2Q9Y618 2525 aa-0.2□□□□□ -2.44
SMC4-207ENST00000467263 NUP98P52948 1817 aa-0.2□□□□□ -2.44
SMC4-207ENST00000467263 DOCK4Q8N1I0 1966 aa-0.21□□□□□ -2.44
SMC4-207ENST00000467263 TRBV19A0A075B6N1 114 aa-0.21□□□□□ -2.44
SMC4-207ENST00000467263 TMEM256-PLSCR3K7ERE1 68 aa-0.21□□□□□ -2.44
SMC4-207ENST00000467263 OR7C1O76099 320 aaPredicted RBP-0.21□□□□□ -2.44
SMC4-207ENST00000467263 HAND1O96004 215 aa-0.21□□□□□ -2.44
SMC4-207ENST00000467263 OR10J4P0C629 311 aa-0.21□□□□□ -2.44
SMC4-207ENST00000467263 CCL4P13236 92 aa-0.21□□□□□ -2.44
SMC4-207ENST00000467263 TMEM14EPQ6UXP3 125 aa-0.21□□□□□ -2.44
SMC4-207ENST00000467263 Q6ZQY7 126 aa-0.21□□□□□ -2.44
SMC4-207ENST00000467263 SIGMAR1Q99720 223 aa-0.21□□□□□ -2.44
SMC4-207ENST00000467263 IMUPQ9GZP8 106 aa-0.21□□□□□ -2.44
SMC4-207ENST00000467263 PARVBQ9HBI1 364 aa-0.21□□□□□ -2.44
SMC4-207ENST00000467263 NIPSNAP2O75323 286 aa-0.22□□□□□ -2.44
SMC4-207ENST00000467263 HLA-EP13747 358 aa-0.22□□□□□ -2.44
SMC4-207ENST00000467263 RAB5CP51148 216 aa-0.22□□□□□ -2.44
SMC4-207ENST00000467263 ITGB3BPQ13352 177 aaPredicted RBP-0.22□□□□□ -2.44
SMC4-207ENST00000467263 OR8J2Q8NGG1 315 aa-0.22□□□□□ -2.44
SMC4-207ENST00000467263 OR5D16Q8NGK9 328 aa-0.22□□□□□ -2.44
SMC4-207ENST00000467263 KIFC1Q9BW19 673 aa-0.22□□□□□ -2.44
SMC4-207ENST00000467263 HSPB8Q9UJY1 196 aa-0.22□□□□□ -2.44
SMC4-207ENST00000467263 ARL5AQ9Y689 179 aa-0.22□□□□□ -2.44
SMC4-207ENST00000467263 PIEZO1Q92508 2521 aa-0.23□□□□□ -2.45
SMC4-207ENST00000467263 COL24A1Q17RW2 1714 aa-0.23□□□□□ -2.45
SMC4-207ENST00000467263 GGCTO75223 188 aaKnown RBP-0.23□□□□□ -2.45
SMC4-207ENST00000467263 EIF3IQ13347 325 aaKnown RBP-0.23□□□□□ -2.45
SMC4-207ENST00000467263 OCIAD2Q56VL3 154 aa-0.23□□□□□ -2.45
SMC4-207ENST00000467263 PATE2Q6UY27 113 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms