RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 TMEM235A6NFC5 223 aa3.9□□□□□ -1.79
CXXC4-202ENST00000466963 NXPH4O95158 308 aa3.9□□□□□ -1.79
CXXC4-202ENST00000466963 AKR1C2P52895 323 aa3.9□□□□□ -1.79
CXXC4-202ENST00000466963 FAM78BQ5VT40 261 aa3.9□□□□□ -1.79
CXXC4-202ENST00000466963 NEGR1Q7Z3B1 354 aa3.9□□□□□ -1.79
CXXC4-202ENST00000466963 TBC1D26Q86UD7 250 aa3.9□□□□□ -1.79
CXXC4-202ENST00000466963 OR8I2Q8N0Y5 310 aa3.9□□□□□ -1.79
CXXC4-202ENST00000466963 PTH2Q96A98 100 aa3.9□□□□□ -1.79
CXXC4-202ENST00000466963 PINX1Q96BK5 328 aaKnown RBP3.9□□□□□ -1.79
CXXC4-202ENST00000466963 LINC01587Q99440 93 aa3.9□□□□□ -1.79
CXXC4-202ENST00000466963 ATP5SQ99766 215 aa3.9□□□□□ -1.79
CXXC4-202ENST00000466963 TMEM147Q9BVK8 224 aa3.9□□□□□ -1.79
CXXC4-202ENST00000466963 ZNF586Q9NXT0 402 aa3.9□□□□□ -1.79
CXXC4-202ENST00000466963 TMEM56-RWDD3S4R434 201 aa3.9□□□□□ -1.79
CXXC4-202ENST00000466963 PNMA8CA0A1B0GUJ8 204 aa3.89□□□□□ -1.79
CXXC4-202ENST00000466963 SMIM31A0A1B0GVY4 71 aa3.89□□□□□ -1.79
CXXC4-202ENST00000466963 ZNF324O75467 553 aaPredicted RBP3.89□□□□□ -1.79
CXXC4-202ENST00000466963 RND2P52198 227 aa3.89□□□□□ -1.79
CXXC4-202ENST00000466963 KLF9Q13886 244 aaPredicted RBP3.89□□□□□ -1.79
CXXC4-202ENST00000466963 LINC01556Q5JQF7 62 aa3.89□□□□□ -1.79
CXXC4-202ENST00000466963 NUDCD2Q8WVJ2 157 aa3.89□□□□□ -1.79
CXXC4-202ENST00000466963 HEYLQ9NQ87 328 aaPredicted RBP3.89□□□□□ -1.79
CXXC4-202ENST00000466963 TRAV18A0A075B6X5 111 aa3.89□□□□□ -1.79
CXXC4-202ENST00000466963 TRAV8-1A0A0A6YYK1 113 aa3.89□□□□□ -1.79
CXXC4-202ENST00000466963 IBA57-AS1B1ANH7 110 aa3.89□□□□□ -1.79
CXXC4-202ENST00000466963 CDS2O95674 445 aa3.89□□□□□ -1.79
CXXC4-202ENST00000466963 ELOBQ15370 118 aa3.89□□□□□ -1.79
CXXC4-202ENST00000466963 ESRGQ1W209 222 aa3.89□□□□□ -1.79
CXXC4-202ENST00000466963 ACOT7LQ6ZUV0 252 aa3.89□□□□□ -1.79
CXXC4-202ENST00000466963 C12orf45Q8N5I9 185 aaPredicted RBP3.89□□□□□ -1.79
CXXC4-202ENST00000466963 Q8N976 141 aa3.89□□□□□ -1.79
CXXC4-202ENST00000466963 TRAV8-3A0A0A6YYJ7 113 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 FCER2P06734 321 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 SULT1A3P0DMM9 295 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 SULT1A4P0DMN0 295 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 TNFSF8P32971 234 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 DLK1P80370 383 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 PSG3Q16557 428 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 C19orf35Q6ZS72 473 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 OR8A1Q8NGG7 326 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 KCNIP3Q9Y2W7 256 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 IGKV3-7A0A075B6H7 116 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 TRAV8-6A0A0B4J262 113 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 C3orf85A0A1B0GTC6 90 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 APOA1P02647 267 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 PFN1P07737 140 aaKnown RBP3.88□□□□□ -1.79
CXXC4-202ENST00000466963 ANXA3P12429 323 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 FXYD4P59646 89 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 TSPAN5P62079 268 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 PIK3CD-AS1Q5SR53 167 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 LHFPL1Q86WI0 220 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 Q8N814 137 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 PPP1R14BQ96C90 147 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 GGACTQ9BVM4 153 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 TMEM222Q9H0R3 208 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 COPZ2Q9P299 210 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 HSPB7Q9UBY9 170 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 LENEPQ9Y5L5 61 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 TRAV6A0A075B6T7 132 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 C9JCJ5 164 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 HMGB3O15347 200 aaKnown RBP3.88□□□□□ -1.79
CXXC4-202ENST00000466963 CRXO43186 299 aaPredicted RBP3.88□□□□□ -1.79
CXXC4-202ENST00000466963 TNFSF12O43508 249 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 PSG1P11464 419 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 KRTAP10-1P60331 282 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 LGI3Q8N145 548 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 RNASE11Q8TAA1 199 aaKnown RBP3.88□□□□□ -1.79
CXXC4-202ENST00000466963 GPR146Q96CH1 333 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 LINC00477Q96M19 166 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 LINC00052Q96N35 136 aa3.88□□□□□ -1.79
CXXC4-202ENST00000466963 C14orf166Q9Y224 244 aaKnown RBP3.88□□□□□ -1.79
CXXC4-202ENST00000466963 A0A096LPF7 62 aa3.87□□□□□ -1.79
CXXC4-202ENST00000466963 TEX13DA0A0J9YY54 714 aaPredicted RBP3.87□□□□□ -1.79
CXXC4-202ENST00000466963 CNN1P51911 297 aaKnown RBP3.87□□□□□ -1.79
CXXC4-202ENST00000466963 RAP2BP61225 183 aa3.87□□□□□ -1.79
CXXC4-202ENST00000466963 CNPY1Q3B7I2 92 aa3.87□□□□□ -1.79
CXXC4-202ENST00000466963 FFAR4Q5NUL3 377 aa3.87□□□□□ -1.79
CXXC4-202ENST00000466963 LAIR2Q6ISS4 152 aa3.87□□□□□ -1.79
CXXC4-202ENST00000466963 EIF4E3Q8N5X7 224 aaKnown RBP3.87□□□□□ -1.79
CXXC4-202ENST00000466963 OR10G4Q8NGN3 311 aa3.87□□□□□ -1.79
CXXC4-202ENST00000466963 MAFIPQ8WZ33 124 aa3.87□□□□□ -1.79
CXXC4-202ENST00000466963 KCNK15Q9H427 330 aa3.87□□□□□ -1.79
CXXC4-202ENST00000466963 APOBP04114 4563 aaKnown RBP3.87□□□□□ -1.79
CXXC4-202ENST00000466963 H3BRN7 92 aa3.87□□□□□ -1.79
CXXC4-202ENST00000466963 SPINK4O60575 86 aa3.87□□□□□ -1.79
CXXC4-202ENST00000466963 TCL1AP56279 114 aa3.87□□□□□ -1.79
CXXC4-202ENST00000466963 CLDN12P56749 244 aa3.87□□□□□ -1.79
CXXC4-202ENST00000466963 TMEM229BQ8NBD8 167 aa3.87□□□□□ -1.79
CXXC4-202ENST00000466963 MRGPRFQ96AM1 343 aa3.87□□□□□ -1.79
CXXC4-202ENST00000466963 SHANK2-AS3Q9BTD1 123 aa3.87□□□□□ -1.79
CXXC4-202ENST00000466963 Q9H521 79 aa3.87□□□□□ -1.79
CXXC4-202ENST00000466963 TXNL4BQ9NX01 149 aaKnown RBP3.87□□□□□ -1.79
CXXC4-202ENST00000466963 IGHV3-49A0A0A0MS15 119 aa3.86□□□□□ -1.79
CXXC4-202ENST00000466963 ZFP92A6NM28 416 aa3.86□□□□□ -1.79
CXXC4-202ENST00000466963 CEBPZOSA8MTT3 80 aa3.86□□□□□ -1.79
CXXC4-202ENST00000466963 PAX4O43316 350 aa3.86□□□□□ -1.79
CXXC4-202ENST00000466963 PDE6HQ13956 83 aa3.86□□□□□ -1.79
CXXC4-202ENST00000466963 MZT2AQ6P582 158 aa3.86□□□□□ -1.79
CXXC4-202ENST00000466963 ATP6V0E2Q8NHE4 81 aa3.86□□□□□ -1.79
CXXC4-202ENST00000466963 CACNG5Q9UF02 275 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms