RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 OR11H7Q8NGC8 314 aa14.53□□□□□ -0.08
COL6A1-203ENST00000466285 APOBP04114 4563 aaKnown RBP14.52□□□□□ -0.08
COL6A1-203ENST00000466285 PLAC8L1A1L4L8 177 aa14.52□□□□□ -0.09
COL6A1-203ENST00000466285 CCNKO75909 580 aa14.52□□□□□ -0.09
COL6A1-203ENST00000466285 ORM2P19652 201 aa14.52□□□□□ -0.09
COL6A1-203ENST00000466285 RRN3P1Q2M238 152 aa14.52□□□□□ -0.09
COL6A1-203ENST00000466285 LRTM2Q8N967 370 aa14.52□□□□□ -0.09
COL6A1-203ENST00000466285 IGF2BP2-AS1Q96M15 143 aa14.52□□□□□ -0.09
COL6A1-203ENST00000466285 SCGB3A2Q96PL1 93 aa14.52□□□□□ -0.09
COL6A1-203ENST00000466285 RPRMQ9NS64 109 aa14.52□□□□□ -0.09
COL6A1-203ENST00000466285 DUXBA0A1W2PPF3 345 aa14.51□□□□□ -0.09
COL6A1-203ENST00000466285 IFNA21P01568 189 aa14.51□□□□□ -0.09
COL6A1-203ENST00000466285 HOXB5P09067 269 aa14.51□□□□□ -0.09
COL6A1-203ENST00000466285 ATP5IP56385 69 aaPredicted RBP14.51□□□□□ -0.09
COL6A1-203ENST00000466285 DAD1P61803 113 aa14.51□□□□□ -0.09
COL6A1-203ENST00000466285 RAB11AP62491 216 aa14.51□□□□□ -0.09
COL6A1-203ENST00000466285 OXA1LQ15070 435 aa14.51□□□□□ -0.09
COL6A1-203ENST00000466285 TMEM128Q5BJH2 165 aa14.51□□□□□ -0.09
COL6A1-203ENST00000466285 FAM210BQ96KR6 192 aa14.51□□□□□ -0.09
COL6A1-203ENST00000466285 TRAV12-2A0A075B6T6 113 aa14.5□□□□□ -0.09
COL6A1-203ENST00000466285 H3BRN7 92 aa14.5□□□□□ -0.09
COL6A1-203ENST00000466285 SYNGR2O43760 224 aa14.5□□□□□ -0.09
COL6A1-203ENST00000466285 SFT2D2O95562 160 aa14.5□□□□□ -0.09
COL6A1-203ENST00000466285 FABP1P07148 127 aa14.5□□□□□ -0.09
COL6A1-203ENST00000466285 AZU1P20160 251 aa14.5□□□□□ -0.09
COL6A1-203ENST00000466285 FCN2Q15485 313 aa14.5□□□□□ -0.09
COL6A1-203ENST00000466285 SPATA31B1PQ5VZV4 182 aa14.5□□□□□ -0.09
COL6A1-203ENST00000466285 OR1B1Q8NGR6 318 aa14.5□□□□□ -0.09
COL6A1-203ENST00000466285 SLC25A39Q9BZJ4 359 aaPredicted RBP14.5□□□□□ -0.09
COL6A1-203ENST00000466285 PFDN2Q9UHV9 154 aa14.5□□□□□ -0.09
COL6A1-203ENST00000466285 TEX48A0A1B0GUV7 120 aa14.49□□□□□ -0.09
COL6A1-203ENST00000466285 ADAP1O75689 374 aa14.49□□□□□ -0.09
COL6A1-203ENST00000466285 GALR1P47211 349 aa14.49□□□□□ -0.09
COL6A1-203ENST00000466285 AKR1C1Q04828 323 aa14.49□□□□□ -0.09
COL6A1-203ENST00000466285 SPANXN5Q5MJ07 72 aa14.49□□□□□ -0.09
COL6A1-203ENST00000466285 GGNBP1Q5YKI7 109 aa14.49□□□□□ -0.09
COL6A1-203ENST00000466285 SLC25A6P12236 298 aa14.48□□□□□ -0.09
COL6A1-203ENST00000466285 MEOX2P50222 304 aa14.48□□□□□ -0.09
COL6A1-203ENST00000466285 PYDC2Q56P42 97 aa14.48□□□□□ -0.09
COL6A1-203ENST00000466285 UHRF2Q96PU4 802 aa14.48□□□□□ -0.09
COL6A1-203ENST00000466285 TMEM208Q9BTX3 173 aa14.48□□□□□ -0.09
COL6A1-203ENST00000466285 PMS2P5A8MQ11 134 aa14.47□□□□□ -0.09
COL6A1-203ENST00000466285 TNP2Q05952 138 aa14.47□□□□□ -0.09
COL6A1-203ENST00000466285 FGL1Q08830 312 aa14.47□□□□□ -0.09
COL6A1-203ENST00000466285 BAK1Q16611 211 aa14.47□□□□□ -0.09
COL6A1-203ENST00000466285 RNF212Q495C1 297 aa14.47□□□□□ -0.09
COL6A1-203ENST00000466285 TOMM5Q8N4H5 51 aa14.47□□□□□ -0.09
COL6A1-203ENST00000466285 BPIFCQ8NFQ6 507 aa14.47□□□□□ -0.09
COL6A1-203ENST00000466285 S100ZQ8WXG8 99 aa14.47□□□□□ -0.09
COL6A1-203ENST00000466285 SLC45A2Q9UMX9 530 aa14.47□□□□□ -0.09
COL6A1-203ENST00000466285 INSP01308 110 aa14.46□□□□□ -0.09
COL6A1-203ENST00000466285 DEFB130BP0DP73 79 aa14.46□□□□□ -0.09
COL6A1-203ENST00000466285 DEFB130AP0DP74 79 aa14.46□□□□□ -0.09
COL6A1-203ENST00000466285 POLR2GP62487 172 aaKnown RBP eCLIP14.46□□□□□ -0.09
COL6A1-203ENST00000466285 DEDD2Q8WXF8 326 aa14.46□□□□□ -0.09
COL6A1-203ENST00000466285 SHANK2-AS3Q9BTD1 123 aa14.46□□□□□ -0.09
COL6A1-203ENST00000466285 TMEM147Q9BVK8 224 aa14.46□□□□□ -0.09
COL6A1-203ENST00000466285 TMED3Q9Y3Q3 217 aa14.46□□□□□ -0.09
COL6A1-203ENST00000466285 DNAH5Q8TE73 4624 aa14.45□□□□□ -0.1
COL6A1-203ENST00000466285 C1orf134Q5TEV5 83 aa14.45□□□□□ -0.1
COL6A1-203ENST00000466285 CYP2G1PQ6ZSU1 146 aa14.45□□□□□ -0.1
COL6A1-203ENST00000466285 OR4D5Q8NGN0 318 aa14.45□□□□□ -0.1
COL6A1-203ENST00000466285 SMCO3A2RU48 225 aa14.44□□□□□ -0.1
COL6A1-203ENST00000466285 BOLA2-SMG1P6H3BVE0 249 aa14.44□□□□□ -0.1
COL6A1-203ENST00000466285 MED6O75586 246 aa14.44□□□□□ -0.1
COL6A1-203ENST00000466285 SNRPCP09234 159 aaKnown RBP14.44□□□□□ -0.1
COL6A1-203ENST00000466285 FAUP35544 74 aaKnown RBP14.44□□□□□ -0.1
COL6A1-203ENST00000466285 KIR3DS1Q14943 382 aa14.44□□□□□ -0.1
COL6A1-203ENST00000466285 ZNF738Q8NE65 137 aa14.44□□□□□ -0.1
COL6A1-203ENST00000466285 CIB3Q96Q77 187 aaPredicted RBP14.44□□□□□ -0.1
COL6A1-203ENST00000466285 CCDC32Q9BV29 185 aa14.44□□□□□ -0.1
COL6A1-203ENST00000466285 LINC00869P0C866 280 aa14.43□□□□□ -0.1
COL6A1-203ENST00000466285 IL7P13232 177 aa14.43□□□□□ -0.1
COL6A1-203ENST00000466285 RRAS2P62070 204 aaPredicted RBP14.43□□□□□ -0.1
COL6A1-203ENST00000466285 HIST1H1AQ02539 215 aaPredicted RBP14.43□□□□□ -0.1
COL6A1-203ENST00000466285 SAMD13Q5VXD3 122 aa14.43□□□□□ -0.1
COL6A1-203ENST00000466285 PATE2Q6UY27 113 aa14.43□□□□□ -0.1
COL6A1-203ENST00000466285 ZNRF2Q8NHG8 242 aa14.43□□□□□ -0.1
COL6A1-203ENST00000466285 PARD6GQ9BYG4 376 aaPredicted RBP14.43□□□□□ -0.1
COL6A1-203ENST00000466285 FLVCR2Q9UPI3 526 aa14.43□□□□□ -0.1
COL6A1-203ENST00000466285 STRAPQ9Y3F4 350 aaKnown RBP14.43□□□□□ -0.1
COL6A1-203ENST00000466285 MRPS12O15235 138 aaKnown RBP14.42□□□□□ -0.1
COL6A1-203ENST00000466285 SSSCA1O60232 199 aa14.42□□□□□ -0.1
COL6A1-203ENST00000466285 CFDP00746 253 aaPredicted RBP14.42□□□□□ -0.1
COL6A1-203ENST00000466285 CXCL3P19876 107 aa14.42□□□□□ -0.1
COL6A1-203ENST00000466285 TMEM144Q7Z5S9 345 aa14.42□□□□□ -0.1
COL6A1-203ENST00000466285 HIGD1AQ9Y241 93 aa14.42□□□□□ -0.1
COL6A1-203ENST00000466285 C9orf170A2RU37 121 aa14.41□□□□□ -0.1
COL6A1-203ENST00000466285 LYRM9A8MSI8 78 aa14.41□□□□□ -0.1
COL6A1-203ENST00000466285 DUSP14O95147 198 aaKnown RBP14.41□□□□□ -0.1
COL6A1-203ENST00000466285 ID3Q02535 119 aa14.41□□□□□ -0.1
COL6A1-203ENST00000466285 SLC38A11Q08AI6 406 aa14.41□□□□□ -0.1
COL6A1-203ENST00000466285 ZNF846Q147U1 533 aa14.41□□□□□ -0.1
COL6A1-203ENST00000466285 OR8A1Q8NGG7 326 aa14.41□□□□□ -0.1
COL6A1-203ENST00000466285 GPR82Q96P67 336 aa14.41□□□□□ -0.1
COL6A1-203ENST00000466285 SLC25A21Q9BQT8 299 aaPredicted RBP14.41□□□□□ -0.1
COL6A1-203ENST00000466285 A0A087X0K7 114 aa14.4□□□□□ -0.1
COL6A1-203ENST00000466285 F5H768 121 aa14.4□□□□□ -0.1
COL6A1-203ENST00000466285 NUDT3O95989 172 aa14.4□□□□□ -0.1
COL6A1-203ENST00000466285 IL5P05113 134 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms