RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 H0Y8G0 127 aa12.96□□□□□ -0.33
SLX4-202ENST00000466154 IGKV1-17P01599 117 aa12.96□□□□□ -0.33
SLX4-202ENST00000466154 NUTF2P61970 127 aaKnown RBP12.96□□□□□ -0.33
SLX4-202ENST00000466154 C18orf32Q8TCD1 76 aa12.96□□□□□ -0.33
SLX4-202ENST00000466154 I3L2K1 104 aa12.96□□□□□ -0.34
SLX4-202ENST00000466154 M0R3E3 92 aa12.96□□□□□ -0.34
SLX4-202ENST00000466154 RPP21Q9H633 154 aaKnown RBP12.96□□□□□ -0.34
SLX4-202ENST00000466154 TMSB15BA0A087X1C1 80 aa12.95□□□□□ -0.34
SLX4-202ENST00000466154 SH2D7A6NKC9 451 aaPredicted RBP12.95□□□□□ -0.34
SLX4-202ENST00000466154 M0R2Z0 102 aa12.95□□□□□ -0.34
SLX4-202ENST00000466154 DMRTA1Q5VZB9 504 aa12.95□□□□□ -0.34
SLX4-202ENST00000466154 UBTD1Q9HAC8 227 aa12.95□□□□□ -0.34
SLX4-202ENST00000466154 CSN3P07498 182 aa12.94□□□□□ -0.34
SLX4-202ENST00000466154 KLRB1Q12918 225 aa12.94□□□□□ -0.34
SLX4-202ENST00000466154 OR10J3Q5JRS4 329 aa12.94□□□□□ -0.34
SLX4-202ENST00000466154 OR4F17Q8NGA8 305 aa12.94□□□□□ -0.34
SLX4-202ENST00000466154 MUC21A0A0G2JKD1 596 aa12.94□□□□□ -0.34
SLX4-202ENST00000466154 MUC21A0A140T8X8 626 aa12.94□□□□□ -0.34
SLX4-202ENST00000466154 K7EIM0 57 aa12.94□□□□□ -0.34
SLX4-202ENST00000466154 MYCNOSP40205 109 aa12.94□□□□□ -0.34
SLX4-202ENST00000466154 MUC21Q5SSG8 566 aa12.94□□□□□ -0.34
SLX4-202ENST00000466154 MSRB2Q9Y3D2 182 aa12.94□□□□□ -0.34
SLX4-202ENST00000466154 GOLT1BQ9Y3E0 138 aa12.94□□□□□ -0.34
SLX4-202ENST00000466154 C3orf79P0CE67 100 aa12.94□□□□□ -0.34
SLX4-202ENST00000466154 S100A7P31151 101 aa12.94□□□□□ -0.34
SLX4-202ENST00000466154 M0R143 59 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 CHEK1O14757 476 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 OR2J3O76001 311 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 CEACAM3P40198 252 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 MAJINQ3KP22 176 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 IGFL4Q6B9Z1 124 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 DYNAPQ8N1N2 210 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 GTSF1Q8WW33 167 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 COL25A1Q9BXS0 654 aaPredicted RBP12.93□□□□□ -0.34
SLX4-202ENST00000466154 OR2T8A6NH00 312 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 A8MWL6 223 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 ZNF138P52744 262 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 COX19Q49B96 90 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 VMO1Q7Z5L0 202 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 BPIFA4PQ86YQ2 179 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 MBD6Q96DN6 1003 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 RNF125Q96EQ8 232 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 FMC1Q96HJ9 113 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 C2orf88Q9BSF0 95 aa12.93□□□□□ -0.34
SLX4-202ENST00000466154 SPATA45Q537H7 98 aa12.92□□□□□ -0.34
SLX4-202ENST00000466154 FAM231DQ6ZW35 169 aa12.92□□□□□ -0.34
SLX4-202ENST00000466154 CHRDL1Q9BU40 450 aa12.92□□□□□ -0.34
SLX4-202ENST00000466154 CLEC5AQ9NY25 188 aa12.92□□□□□ -0.34
SLX4-202ENST00000466154 HBBP68871 147 aa12.92□□□□□ -0.34
SLX4-202ENST00000466154 LY6LH3BQJ8 138 aa12.92□□□□□ -0.34
SLX4-202ENST00000466154 TOMM40O96008 361 aa12.92□□□□□ -0.34
SLX4-202ENST00000466154 KIR2DL5BA0A0G2JN68 375 aa12.91□□□□□ -0.34
SLX4-202ENST00000466154 KIR2DL5BA0A0G2JPC4 375 aa12.91□□□□□ -0.34
SLX4-202ENST00000466154 KIR2DL5AQ8N109 375 aa12.91□□□□□ -0.34
SLX4-202ENST00000466154 HLA-DRB1P01911 266 aa12.91□□□□□ -0.34
SLX4-202ENST00000466154 PAX1P15863 534 aa12.91□□□□□ -0.34
SLX4-202ENST00000466154 NDPQ00604 133 aa12.91□□□□□ -0.34
SLX4-202ENST00000466154 TEX43Q6ZNM6 134 aa12.91□□□□□ -0.34
SLX4-202ENST00000466154 Q86TA4 180 aa12.91□□□□□ -0.34
SLX4-202ENST00000466154 LTAP01374 205 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 ESDP10768 282 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 ZFP36P26651 326 aaKnown RBP12.9□□□□□ -0.34
SLX4-202ENST00000466154 ZFHX3Q15911 3703 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 C5orf64Q2M2E5 130 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 NIT1Q86X76 327 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 TXN2Q99757 166 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 C7orf69Q9H7B7 122 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 OTORQ9NRC9 128 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 IGHV3OR16-13A0A075B7E8 117 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 IGHV3-74A0A0B4J1X5 117 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 TCF21O43680 179 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 ECSCRQ19T08 205 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 RNF151Q2KHN1 245 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 ARPC1AQ92747 370 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 TMUB1Q9BVT8 246 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 IGHV3OR16-10A0A075B7F0 116 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 ZNF491Q8N8L2 437 aa12.9□□□□□ -0.34
SLX4-202ENST00000466154 ALKBH7Q9BT30 221 aaPredicted RBP12.9□□□□□ -0.34
SLX4-202ENST00000466154 MCRIP2Q9BUT9 160 aaKnown RBP12.9□□□□□ -0.34
SLX4-202ENST00000466154 A0A1W2PPR1 153 aa12.89□□□□□ -0.35
SLX4-202ENST00000466154 TMEM11P17152 192 aa12.89□□□□□ -0.35
SLX4-202ENST00000466154 MLST8Q9BVC4 326 aa12.89□□□□□ -0.35
SLX4-202ENST00000466154 IGHV3-66A0A0C4DH42 116 aa12.89□□□□□ -0.35
SLX4-202ENST00000466154 CFHR4Q92496 578 aa12.89□□□□□ -0.35
SLX4-202ENST00000466154 KLF12Q9Y4X4 402 aa12.89□□□□□ -0.35
SLX4-202ENST00000466154 ZC2HC1AQ96GY0 325 aa12.88□□□□□ -0.35
SLX4-202ENST00000466154 SPOCK3Q9BQ16 436 aa12.88□□□□□ -0.35
SLX4-202ENST00000466154 MIEN1Q9BRT3 115 aa12.88□□□□□ -0.35
SLX4-202ENST00000466154 TRBV19A0A075B6N1 114 aa12.88□□□□□ -0.35
SLX4-202ENST00000466154 LY6G5BQ8NDX9 201 aa12.88□□□□□ -0.35
SLX4-202ENST00000466154 SHANK2-AS3Q9BTD1 123 aa12.88□□□□□ -0.35
SLX4-202ENST00000466154 MRPL27Q9P0M9 148 aaKnown RBP12.88□□□□□ -0.35
SLX4-202ENST00000466154 VPS13CQ709C8 3753 aa12.88□□□□□ -0.35
SLX4-202ENST00000466154 PRTN3P24158 256 aa12.88□□□□□ -0.35
SLX4-202ENST00000466154 TFPI2P48307 235 aa12.88□□□□□ -0.35
SLX4-202ENST00000466154 C8orf49Q96NF6 230 aa12.88□□□□□ -0.35
SLX4-202ENST00000466154 TMEM208Q9BTX3 173 aa12.88□□□□□ -0.35
SLX4-202ENST00000466154 NDUFB8O95169 186 aa12.87□□□□□ -0.35
SLX4-202ENST00000466154 RBPMS2Q6ZRY4 209 aaKnown RBP12.87□□□□□ -0.35
SLX4-202ENST00000466154 ARL6IP6Q8N6S5 226 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms