RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 AAMDCQ9H7C9 122 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 MANBALQ9NQG1 85 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 RPRMQ9NS64 109 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 PRELID1Q9Y255 219 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 S4R3C0 116 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 CELSR1Q9NYQ6 3014 aa5.68□□□□□ -1.5
EPHA4-210ENST00000463446 SONP18583 2426 aaKnown RBP5.67□□□□□ -1.5
EPHA4-210ENST00000463446 K7EQM0 130 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 OR7C2O60412 319 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 NBEAP1P0C6P0 100 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 STAG3L2P0CL84 134 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 STAG3L3P0CL85 134 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 FOLR2P14207 255 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 CSN1S1P47710 185 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 LCN12Q6JVE5 192 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 FAM122CQ6P4D5 195 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 C16orf54Q6UWD8 224 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 SIGLEC15Q6ZMC9 328 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 IL34Q6ZMJ4 242 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 C19orf35Q6ZS72 473 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 C11orf44Q8N8P7 122 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 WFDC9Q8NEX5 89 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 FAM213BQ8TBF2 198 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 DLX4Q92988 240 aaPredicted RBP5.67□□□□□ -1.5
EPHA4-210ENST00000463446 RPUSD4Q96CM3 377 aaKnown RBP5.67□□□□□ -1.5
EPHA4-210ENST00000463446 UHRF2Q96PU4 802 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 SLC50A1Q9BRV3 221 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 RHPN1-AS1Q9BWJ2 59 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 VSIRQ9H7M9 311 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 ZFAND3Q9H8U3 227 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 MRPL36Q9P0J6 103 aaKnown RBP5.67□□□□□ -1.5
EPHA4-210ENST00000463446 MLXQ9UH92 298 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 U3KQE9 123 aa5.67□□□□□ -1.5
EPHA4-210ENST00000463446 SERTM2A0A1B0GWG4 89 aa5.66□□□□□ -1.5
EPHA4-210ENST00000463446 A0A1W2PRE2 83 aa5.66□□□□□ -1.5
EPHA4-210ENST00000463446 C2orf70A6NJV1 201 aa5.66□□□□□ -1.5
EPHA4-210ENST00000463446 H3BRN7 92 aa5.66□□□□□ -1.5
EPHA4-210ENST00000463446 CHEK1O14757 476 aa5.66□□□□□ -1.5
EPHA4-210ENST00000463446 RGS13O14921 159 aa5.66□□□□□ -1.5
EPHA4-210ENST00000463446 S100A9P06702 114 aaKnown RBP5.66□□□□□ -1.5
EPHA4-210ENST00000463446 GATA2P23769 480 aaPredicted RBP5.66□□□□□ -1.5
EPHA4-210ENST00000463446 FHITP49789 147 aa5.66□□□□□ -1.5
EPHA4-210ENST00000463446 PEA15Q15121 130 aa5.66□□□□□ -1.5
EPHA4-210ENST00000463446 PRR31Q5SQ13 230 aa5.66□□□□□ -1.5
EPHA4-210ENST00000463446 SPATA31B1PQ5VZV4 182 aa5.66□□□□□ -1.5
EPHA4-210ENST00000463446 LCN15Q6UWW0 184 aa5.66□□□□□ -1.5
EPHA4-210ENST00000463446 SPAG8Q99932 426 aaPredicted RBP5.66□□□□□ -1.5
EPHA4-210ENST00000463446 SH3BGRL3Q9H299 93 aa5.66□□□□□ -1.5
EPHA4-210ENST00000463446 SLC25A22Q9H936 323 aa5.66□□□□□ -1.5
EPHA4-210ENST00000463446 DOK5Q9P104 306 aa5.66□□□□□ -1.5
EPHA4-210ENST00000463446 FN1P02751 2386 aaKnown RBP5.65□□□□□ -1.5
EPHA4-210ENST00000463446 A0A087X0K7 114 aa5.65□□□□□ -1.5
EPHA4-210ENST00000463446 IGHV3-35A0A0C4DH35 117 aa5.65□□□□□ -1.5
EPHA4-210ENST00000463446 MAP1LC3B2A6NCE7 125 aa5.65□□□□□ -1.5
EPHA4-210ENST00000463446 OR4C46A6NHA9 309 aa5.65□□□□□ -1.5
EPHA4-210ENST00000463446 PDE6DO43924 150 aa5.65□□□□□ -1.5
EPHA4-210ENST00000463446 USF2Q15853 346 aaPredicted RBP5.65□□□□□ -1.5
EPHA4-210ENST00000463446 TM4SF20Q53R12 229 aa5.65□□□□□ -1.5
EPHA4-210ENST00000463446 CLLU1Q5K131 121 aa5.65□□□□□ -1.5
EPHA4-210ENST00000463446 PATE2Q6UY27 113 aa5.65□□□□□ -1.5
EPHA4-210ENST00000463446 LYPD6BQ8NI32 183 aa5.65□□□□□ -1.5
EPHA4-210ENST00000463446 CMTM2Q8TAZ6 248 aa5.65□□□□□ -1.5
EPHA4-210ENST00000463446 FAM110AQ9BQ89 295 aa5.65□□□□□ -1.5
EPHA4-210ENST00000463446 MAP1LC3BQ9GZQ8 125 aa5.65□□□□□ -1.5
EPHA4-210ENST00000463446 NRN1Q9NPD7 142 aa5.65□□□□□ -1.5
EPHA4-210ENST00000463446 RAB19A4D1S5 217 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 ISLRO14498 428 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 TSPAN4O14817 238 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 SAP30O75446 220 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 TRBV12-3P01733 135 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 CSN3P07498 182 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 GCHFRP30047 84 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 SLURP1P55000 103 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 DEFB114Q30KQ6 69 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 UQCC3Q6UW78 93 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 UNQ9165/PRO28630Q6UXU0 137 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 TCF24Q7RTU0 167 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 IQCF2Q8IXL9 164 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 LINC00482Q8N8I6 264 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 HIST1H2BAQ96A08 127 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 MRPL53Q96EL3 112 aaKnown RBP5.64□□□□□ -1.51
EPHA4-210ENST00000463446 C16orf92Q96LL3 132 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 EIF5A2Q9GZV4 153 aaKnown RBP5.64□□□□□ -1.51
EPHA4-210ENST00000463446 MED9Q9NWA0 146 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 VAX2Q9UIW0 290 aa5.64□□□□□ -1.51
EPHA4-210ENST00000463446 ZNF469Q96JG9 3925 aaPredicted RBP5.63□□□□□ -1.51
EPHA4-210ENST00000463446 TRBV19A0A075B6N1 114 aa5.63□□□□□ -1.51
EPHA4-210ENST00000463446 TMEM213A2RRL7 107 aa5.63□□□□□ -1.51
EPHA4-210ENST00000463446 RBFOX3A6NFN3 312 aa5.63□□□□□ -1.51
EPHA4-210ENST00000463446 ADARB2-AS1A8MUL3 147 aa5.63□□□□□ -1.51
EPHA4-210ENST00000463446 UBE2L3P68036 154 aaKnown RBP5.63□□□□□ -1.51
EPHA4-210ENST00000463446 SRSF2Q01130 221 aaKnown RBP5.63□□□□□ -1.51
EPHA4-210ENST00000463446 DEFA5Q01523 94 aa5.63□□□□□ -1.51
EPHA4-210ENST00000463446 DEFB136Q30KP8 78 aa5.63□□□□□ -1.51
EPHA4-210ENST00000463446 GTSCR1Q86UQ5 136 aa5.63□□□□□ -1.51
EPHA4-210ENST00000463446 GLMPQ8WWB7 406 aa5.63□□□□□ -1.51
EPHA4-210ENST00000463446 SLC25A2Q9BXI2 301 aa5.63□□□□□ -1.51
EPHA4-210ENST00000463446 BIN3Q9NQY0 253 aa5.63□□□□□ -1.51
EPHA4-210ENST00000463446 OTORQ9NRC9 128 aa5.63□□□□□ -1.51
EPHA4-210ENST00000463446 NSD1Q96L73 2696 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms