RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 A8MUU9 505 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 NDUFB2O95178 105 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 FSTL3O95633 263 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 IGHG2P01859 326 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 HMGN2P05204 90 aaKnown RBP3.41□□□□□ -1.86
COPS3-205ENST00000463097 ZNF25P17030 456 aaPredicted RBP3.41□□□□□ -1.86
COPS3-205ENST00000463097 ALOX5APP20292 161 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 RPS4Y1P22090 263 aaKnown RBP3.41□□□□□ -1.86
COPS3-205ENST00000463097 PDGFRLQ15198 375 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 IQCJQ1A5X6 159 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 SPIN3Q5JUX0 258 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 FAM78BQ5VT40 261 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 OR2T2Q6IF00 324 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 SH2D6Q7Z4S9 175 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 NIT1Q86X76 327 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 ZNF664Q8N3J9 261 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 TMEM106AQ96A25 262 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 TVP23CQ96ET8 276 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 PECRQ9BY49 303 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 ZNF443Q9Y2A4 671 aaPredicted RBP3.41□□□□□ -1.86
COPS3-205ENST00000463097 MRPS16Q9Y3D3 137 aaKnown RBP3.41□□□□□ -1.86
COPS3-205ENST00000463097 DOCK4Q8N1I0 1966 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 CHD5Q8TDI0 1954 aa3.41□□□□□ -1.86
COPS3-205ENST00000463097 ZNF106Q9H2Y7 1883 aaKnown RBP3.41□□□□□ -1.86
COPS3-205ENST00000463097 IGKV2-28A0A075B6P5 120 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 EEF1E1-BLOC1S5C9J1V9 151 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 IGKV2D-28P01615 120 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 PMP2P02689 132 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 TRGC1P0CF51 173 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 GABRA4P48169 554 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 KLF3P57682 345 aaPredicted RBP3.4□□□□□ -1.87
COPS3-205ENST00000463097 TBPL1P62380 186 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 ZNF117Q03924 483 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 BSPH1Q075Z2 132 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 EIF3IQ13347 325 aaKnown RBP3.4□□□□□ -1.87
COPS3-205ENST00000463097 BATFQ16520 125 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 SCGB2B2Q4G0G5 96 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 LDLRAD2Q5SZI1 272 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 KPRPQ5T749 579 aaPredicted RBP3.4□□□□□ -1.87
COPS3-205ENST00000463097 RPL7L1Q6DKI1 246 aaKnown RBP3.4□□□□□ -1.87
COPS3-205ENST00000463097 SLC48A1Q6P1K1 146 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 LYPD6Q86Y78 171 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 ZNF709Q8N972 641 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 PLPP5Q8NEB5 264 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 OR51D1Q8NGF3 324 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 OR51A2Q8NGJ7 313 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 SKA2Q8WVK7 121 aaPredicted RBP3.4□□□□□ -1.87
COPS3-205ENST00000463097 TBX5Q99593 518 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 ZNF2Q9BSG1 426 aaPredicted RBP3.4□□□□□ -1.87
COPS3-205ENST00000463097 SNHG12Q9BXW3 62 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 RPUSD1Q9UJJ7 312 aaKnown RBP3.4□□□□□ -1.87
COPS3-205ENST00000463097 GNG8Q9UK08 70 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 ZFP30Q9Y2G7 519 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 PLXNB2O15031 1838 aa3.4□□□□□ -1.87
COPS3-205ENST00000463097 A6NED7 52 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 H3BMM0 161 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 H3BQ15 152 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 K7EM74 188 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 PPBPP02775 128 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 SRP19P09132 144 aaKnown RBP3.39□□□□□ -1.87
COPS3-205ENST00000463097 CST2P09228 141 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 FABP4P15090 132 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 OR10J1P30954 320 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 CAPZBP47756 277 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 GNG10P50151 68 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 RBX1P62877 108 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 BTG2P78543 158 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 ACOT6Q3I5F7 207 aaPredicted RBP3.39□□□□□ -1.87
COPS3-205ENST00000463097 LINC01590Q5TEZ4 76 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 ZNF550Q7Z398 422 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 SMIM15Q7Z3B0 74 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 LHFPL1Q86WI0 220 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 C3orf22Q8N5N4 141 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 TMEM86BQ8N661 226 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 NEK7Q8TDX7 302 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 FGF13Q92913 245 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 UBE2WQ96B02 151 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 CPNE2Q96FN4 548 aaPredicted RBP3.39□□□□□ -1.87
COPS3-205ENST00000463097 LYRM2Q9NU23 88 aaPredicted RBP3.39□□□□□ -1.87
COPS3-205ENST00000463097 CKLFQ9UBR5 152 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 SLC23A2Q9UGH3 650 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 HS3ST2Q9Y278 367 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 ZNF835Q9Y2P0 537 aa3.39□□□□□ -1.87
COPS3-205ENST00000463097 BRWD3Q6RI45 1802 aa3.38□□□□□ -1.87
COPS3-205ENST00000463097 PIGBOS1A0A0B4J2F0 54 aa3.38□□□□□ -1.87
COPS3-205ENST00000463097 ZNF860A6NHJ4 632 aa3.38□□□□□ -1.87
COPS3-205ENST00000463097 H3BQ85 93 aa3.38□□□□□ -1.87
COPS3-205ENST00000463097 IFNA21P01568 189 aa3.38□□□□□ -1.87
COPS3-205ENST00000463097 TRGC2P03986 189 aa3.38□□□□□ -1.87
COPS3-205ENST00000463097 CXCL1P09341 107 aa3.38□□□□□ -1.87
COPS3-205ENST00000463097 ESDP10768 282 aa3.38□□□□□ -1.87
COPS3-205ENST00000463097 CTLA4P16410 223 aa3.38□□□□□ -1.87
COPS3-205ENST00000463097 TMEM33P57088 247 aa3.38□□□□□ -1.87
COPS3-205ENST00000463097 ARF6P62330 175 aa3.38□□□□□ -1.87
COPS3-205ENST00000463097 FOXF1Q12946 379 aa3.38□□□□□ -1.87
COPS3-205ENST00000463097 TAF9Q16594 264 aa3.38□□□□□ -1.87
COPS3-205ENST00000463097 CCSMST1Q4G0I0 132 aa3.38□□□□□ -1.87
COPS3-205ENST00000463097 COL5A1-AS1Q5SY13 56 aa3.38□□□□□ -1.87
COPS3-205ENST00000463097 GRINAQ7Z429 371 aa3.38□□□□□ -1.87
COPS3-205ENST00000463097 LRRC25Q8N386 305 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms