RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 S100A7AQ86SG5 101 aa10.87□□□□□ -0.67
COL6A1-202ENST00000463060 SPATA3Q8NHX4 192 aa10.87□□□□□ -0.67
COL6A1-202ENST00000463060 LYPD6BQ8NI32 183 aa10.87□□□□□ -0.67
COL6A1-202ENST00000463060 GLMPQ8WWB7 406 aa10.87□□□□□ -0.67
COL6A1-202ENST00000463060 MARC2Q969Z3 335 aa10.87□□□□□ -0.67
COL6A1-202ENST00000463060 C17orf77Q96MU5 243 aa10.87□□□□□ -0.67
COL6A1-202ENST00000463060 RHPN1-AS1Q9BWJ2 59 aa10.87□□□□□ -0.67
COL6A1-202ENST00000463060 SLC25A2Q9BXI2 301 aa10.87□□□□□ -0.67
COL6A1-202ENST00000463060 SLC25A22Q9H936 323 aa10.87□□□□□ -0.67
COL6A1-202ENST00000463060 PEMTQ9UBM1 199 aa10.87□□□□□ -0.67
COL6A1-202ENST00000463060 TRRAPQ9Y4A5 3859 aa10.86□□□□□ -0.67
COL6A1-202ENST00000463060 IGHV3OR16-13A0A075B7E8 117 aa10.86□□□□□ -0.67
COL6A1-202ENST00000463060 IGHV3-49A0A0A0MS15 119 aa10.86□□□□□ -0.67
COL6A1-202ENST00000463060 IGHV3-74A0A0B4J1X5 117 aa10.86□□□□□ -0.67
COL6A1-202ENST00000463060 FAM90A2PQ658T7 463 aa10.86□□□□□ -0.67
COL6A1-202ENST00000463060 SUN5Q8TC36 379 aa10.86□□□□□ -0.67
COL6A1-202ENST00000463060 LRRC20Q8TCA0 184 aa10.86□□□□□ -0.67
COL6A1-202ENST00000463060 TMEM14CQ9P0S9 112 aa10.86□□□□□ -0.67
COL6A1-202ENST00000463060 PFDN2Q9UHV9 154 aa10.86□□□□□ -0.67
COL6A1-202ENST00000463060 SMAD5-AS1Q9Y6J3 95 aa10.86□□□□□ -0.67
COL6A1-202ENST00000463060 CMYA5Q8N3K9 4069 aa10.85□□□□□ -0.67
COL6A1-202ENST00000463060 IGHV3-66A0A0C4DH42 116 aa10.85□□□□□ -0.67
COL6A1-202ENST00000463060 A0A1W2PS18 150 aa10.85□□□□□ -0.67
COL6A1-202ENST00000463060 ZNF705EA8MWA4 302 aaPredicted RBP10.85□□□□□ -0.67
COL6A1-202ENST00000463060 M0QZ24 198 aa10.85□□□□□ -0.67
COL6A1-202ENST00000463060 PF4P02776 101 aa10.85□□□□□ -0.67
COL6A1-202ENST00000463060 NMBP08949 121 aa10.85□□□□□ -0.67
COL6A1-202ENST00000463060 H2AFB1P0C5Y9 115 aa10.85□□□□□ -0.67
COL6A1-202ENST00000463060 GP9P14770 177 aa10.85□□□□□ -0.67
COL6A1-202ENST00000463060 S100A7P31151 101 aa10.85□□□□□ -0.67
COL6A1-202ENST00000463060 MLXQ9UH92 298 aa10.85□□□□□ -0.67
COL6A1-202ENST00000463060 RNF24Q9Y225 148 aa10.85□□□□□ -0.67
COL6A1-202ENST00000463060 HMGB3O15347 200 aaKnown RBP10.84□□□□□ -0.67
COL6A1-202ENST00000463060 TAS2R45P59539 299 aa10.84□□□□□ -0.67
COL6A1-202ENST00000463060 BLOC1S1P78537 153 aa10.84□□□□□ -0.67
COL6A1-202ENST00000463060 LCN15Q6UWW0 184 aa10.84□□□□□ -0.67
COL6A1-202ENST00000463060 PQLC2Q6ZP29 291 aa10.84□□□□□ -0.67
COL6A1-202ENST00000463060 SFT2D1Q8WV19 159 aa10.84□□□□□ -0.67
COL6A1-202ENST00000463060 GPR82Q96P67 336 aa10.84□□□□□ -0.67
COL6A1-202ENST00000463060 ELOVL1Q9BW60 279 aa10.84□□□□□ -0.67
COL6A1-202ENST00000463060 MAP1LC3B2A6NCE7 125 aa10.83□□□□□ -0.68
COL6A1-202ENST00000463060 H3BQ15 152 aa10.83□□□□□ -0.68
COL6A1-202ENST00000463060 CXorf1O96002 111 aa10.83□□□□□ -0.68
COL6A1-202ENST00000463060 ARL14EPLP0DKL9 152 aa10.83□□□□□ -0.68
COL6A1-202ENST00000463060 IGLC2P0DOY2 106 aa10.83□□□□□ -0.68
COL6A1-202ENST00000463060 PYYP10082 97 aa10.83□□□□□ -0.68
COL6A1-202ENST00000463060 CCL20P78556 96 aa10.83□□□□□ -0.68
COL6A1-202ENST00000463060 DEFB114Q30KQ6 69 aa10.83□□□□□ -0.68
COL6A1-202ENST00000463060 KHDC3LQ587J8 217 aa10.83□□□□□ -0.68
COL6A1-202ENST00000463060 BPIFA4PQ86YQ2 179 aa10.83□□□□□ -0.68
COL6A1-202ENST00000463060 OR8I2Q8N0Y5 310 aa10.83□□□□□ -0.68
COL6A1-202ENST00000463060 STXBP6Q8NFX7 210 aa10.83□□□□□ -0.68
COL6A1-202ENST00000463060 PCNPQ8WW12 178 aaKnown RBP10.83□□□□□ -0.68
COL6A1-202ENST00000463060 FXYD5Q96DB9 178 aa10.83□□□□□ -0.68
COL6A1-202ENST00000463060 NARS2Q96I59 477 aaKnown RBP10.83□□□□□ -0.68
COL6A1-202ENST00000463060 MAP1LC3BQ9GZQ8 125 aa10.83□□□□□ -0.68
COL6A1-202ENST00000463060 OR51M1Q9H341 326 aa10.83□□□□□ -0.68
COL6A1-202ENST00000463060 HIST1H1EP10412 219 aaKnown RBP10.82□□□□□ -0.68
COL6A1-202ENST00000463060 RPL7P18124 248 aaKnown RBP10.82□□□□□ -0.68
COL6A1-202ENST00000463060 GCHFRP30047 84 aa10.82□□□□□ -0.68
COL6A1-202ENST00000463060 FGF8P55075 233 aaPredicted RBP10.82□□□□□ -0.68
COL6A1-202ENST00000463060 PMS2P11Q13670 270 aa10.82□□□□□ -0.68
COL6A1-202ENST00000463060 CLLU1Q5K131 121 aa10.82□□□□□ -0.68
COL6A1-202ENST00000463060 GRAMD2BQ96HH9 432 aa10.82□□□□□ -0.68
COL6A1-202ENST00000463060 PAXXQ9BUH6 204 aa10.82□□□□□ -0.68
COL6A1-202ENST00000463060 TMEM231Q9H6L2 316 aa10.82□□□□□ -0.68
COL6A1-202ENST00000463060 ZNF586Q9NXT0 402 aa10.82□□□□□ -0.68
COL6A1-202ENST00000463060 A0A087X0K7 114 aa10.81□□□□□ -0.68
COL6A1-202ENST00000463060 OR7C2O60412 319 aa10.81□□□□□ -0.68
COL6A1-202ENST00000463060 IGLV1-51P01701 117 aa10.81□□□□□ -0.68
COL6A1-202ENST00000463060 BMI1P35226 326 aa10.81□□□□□ -0.68
COL6A1-202ENST00000463060 SIGLEC15Q6ZMC9 328 aa10.81□□□□□ -0.68
COL6A1-202ENST00000463060 HRH4Q9H3N8 390 aa10.81□□□□□ -0.68
COL6A1-202ENST00000463060 TMPRSS5Q9H3S3 457 aa10.81□□□□□ -0.68
COL6A1-202ENST00000463060 HELTA6NFD8 242 aa10.8□□□□□ -0.68
COL6A1-202ENST00000463060 NDUFB4O95168 129 aa10.8□□□□□ -0.68
COL6A1-202ENST00000463060 HBE1P02100 147 aa10.8□□□□□ -0.68
COL6A1-202ENST00000463060 CD5P06127 495 aa10.8□□□□□ -0.68
COL6A1-202ENST00000463060 OR10J4P0C629 311 aa10.8□□□□□ -0.68
COL6A1-202ENST00000463060 NBEAP1P0C6P0 100 aa10.8□□□□□ -0.68
COL6A1-202ENST00000463060 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.8□□□□□ -0.68
COL6A1-202ENST00000463060 TCF24Q7RTU0 167 aa10.8□□□□□ -0.68
COL6A1-202ENST00000463060 TRBV19A0A075B6N1 114 aa10.79□□□□□ -0.68
COL6A1-202ENST00000463060 WIPF1O43516 503 aa10.79□□□□□ -0.68
COL6A1-202ENST00000463060 GALR1P47211 349 aa10.79□□□□□ -0.68
COL6A1-202ENST00000463060 PSMB3P49720 205 aa10.79□□□□□ -0.68
COL6A1-202ENST00000463060 TMEM167BQ9NRX6 74 aa10.79□□□□□ -0.68
COL6A1-202ENST00000463060 SELENOKQ9Y6D0 94 aa10.79□□□□□ -0.68
COL6A1-202ENST00000463060 TRAV25A0A0B4J276 109 aa10.78□□□□□ -0.68
COL6A1-202ENST00000463060 A0A1B0GV50 99 aa10.78□□□□□ -0.68
COL6A1-202ENST00000463060 SOCS3O14543 225 aa10.78□□□□□ -0.68
COL6A1-202ENST00000463060 TSPAN4O14817 238 aa10.78□□□□□ -0.68
COL6A1-202ENST00000463060 SAP30O75446 220 aa10.78□□□□□ -0.68
COL6A1-202ENST00000463060 SNRPCP09234 159 aaKnown RBP10.78□□□□□ -0.68
COL6A1-202ENST00000463060 INSL3P51460 131 aa10.78□□□□□ -0.68
COL6A1-202ENST00000463060 UBE2L3P68036 154 aaKnown RBP10.78□□□□□ -0.68
COL6A1-202ENST00000463060 GUK1Q16774 197 aa10.78□□□□□ -0.68
COL6A1-202ENST00000463060 CD300EQ496F6 205 aaPredicted RBP10.78□□□□□ -0.68
COL6A1-202ENST00000463060 TMEM61Q8N0U2 210 aa10.78□□□□□ -0.68
COL6A1-202ENST00000463060 DCANP1Q8TF63 244 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms