RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 VMO1Q7Z5L0 202 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 KLHDC1Q8N7A1 406 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 RPEQ96AT9 228 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 SIRPDQ9H106 197 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 TNFRSF19Q9NS68 423 aa9.87□□□□□ -0.83
COL4A6-204ENST00000461897 TRAV34A0A0B4J273 112 aa9.86□□□□□ -0.83
COL4A6-204ENST00000461897 HIGD1CA8MV81 97 aa9.86□□□□□ -0.83
COL4A6-204ENST00000461897 HYPMO75409 117 aa9.86□□□□□ -0.83
COL4A6-204ENST00000461897 TOMM40O96008 361 aa9.86□□□□□ -0.83
COL4A6-204ENST00000461897 LINC00614P0C842 121 aa9.86□□□□□ -0.83
COL4A6-204ENST00000461897 G0S2P27469 103 aa9.86□□□□□ -0.83
COL4A6-204ENST00000461897 COL5A1-AS1Q5SY13 56 aa9.86□□□□□ -0.83
COL4A6-204ENST00000461897 FAM162BQ5T6X4 162 aa9.86□□□□□ -0.83
COL4A6-204ENST00000461897 C10orf105Q8TEF2 133 aa9.86□□□□□ -0.83
COL4A6-204ENST00000461897 BORCS7Q96B45 105 aa9.86□□□□□ -0.83
COL4A6-204ENST00000461897 FMC1Q96HJ9 113 aa9.86□□□□□ -0.83
COL4A6-204ENST00000461897 TPSG1Q9NRR2 321 aa9.86□□□□□ -0.83
COL4A6-204ENST00000461897 INSIG2Q9Y5U4 225 aa9.86□□□□□ -0.83
COL4A6-204ENST00000461897 WNK2Q9Y3S1 2297 aa9.86□□□□□ -0.83
COL4A6-204ENST00000461897 C19orf71A6NCJ1 209 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 FAM231BA6NCW3 169 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 VWC2LB2RUY7 222 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 CORTO00230 105 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 SLC25A17O43808 307 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 LTAP01374 205 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 GP9P14770 177 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 HOXB4P17483 251 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-204ENST00000461897 HTR1DP28221 377 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 ATP5J2P56134 94 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 UBE2G1P62253 170 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 MMDQ15546 238 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 TNXAQ16473 311 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 DMRTA1Q5VZB9 504 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 LHFPL4Q7Z7J7 247 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 C5orf17Q8NAS9 161 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 PIMREGQ9BSJ6 248 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 GFRA4Q9GZZ7 299 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 C1RLQ9NZP8 487 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 CELSR1Q9NYQ6 3014 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 IGHV4-61A0A0C4DH41 118 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 SLC25A5P05141 298 aaKnown RBP9.85□□□□□ -0.83
COL4A6-204ENST00000461897 NBEAP1P0C6P0 100 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 CNTFRP26992 372 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 FAM19A2Q8N3H0 131 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 C22orf15Q8WYQ4 148 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 RPP21Q9H633 154 aaKnown RBP9.85□□□□□ -0.83
COL4A6-204ENST00000461897 DPM3Q9P2X0 92 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 GOLT1BQ9Y3E0 138 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 NAV3Q8IVL0 2385 aa9.85□□□□□ -0.83
COL4A6-204ENST00000461897 TENM4Q6N022 2769 aa9.84□□□□□ -0.83
COL4A6-204ENST00000461897 TRBV6-1A0A0K0K1D8 114 aa9.84□□□□□ -0.83
COL4A6-204ENST00000461897 A0A1W2PRD5 423 aa9.84□□□□□ -0.83
COL4A6-204ENST00000461897 A0A1W2PRF3 423 aa9.84□□□□□ -0.83
COL4A6-204ENST00000461897 A0A1W2PRM7 423 aa9.84□□□□□ -0.83
COL4A6-204ENST00000461897 PGPA6NDG6 321 aa9.84□□□□□ -0.83
COL4A6-204ENST00000461897 FAM181BA6NEQ2 426 aa9.84□□□□□ -0.83
COL4A6-204ENST00000461897 NPIPB6E9PJ23 425 aa9.84□□□□□ -0.83
COL4A6-204ENST00000461897 NDUFS8O00217 210 aa9.84□□□□□ -0.83
COL4A6-204ENST00000461897 TIMM23O14925 209 aa9.84□□□□□ -0.83
COL4A6-204ENST00000461897 MOSP00540 346 aa9.84□□□□□ -0.83
COL4A6-204ENST00000461897 GNG5P63218 68 aa9.84□□□□□ -0.83
COL4A6-204ENST00000461897 CYB5R2Q6BCY4 276 aa9.84□□□□□ -0.83
COL4A6-204ENST00000461897 PPP1R14DQ9NXH3 145 aa9.84□□□□□ -0.83
COL4A6-204ENST00000461897 MRPS16Q9Y3D3 137 aaKnown RBP9.84□□□□□ -0.83
COL4A6-204ENST00000461897 CSMD1Q96PZ7 3565 aa9.84□□□□□ -0.83
COL4A6-204ENST00000461897 IGHV4-30-2A0A087WSY4 118 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 C2orf70A6NJV1 201 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 A8MWL6 223 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 HSBP1O75506 76 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 RPL27AP46776 148 aaKnown RBP9.83□□□□□ -0.84
COL4A6-204ENST00000461897 HBBP68871 147 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 RUSC1-AS1Q66K80 236 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 CLEC2AQ6UVW9 174 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 CFHR4Q92496 578 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 TMEM14CQ9P0S9 112 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 ZFP30Q9Y2G7 519 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 HILPDAQ9Y5L2 63 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 USP9YO00507 2555 aaPredicted RBP9.83□□□□□ -0.84
COL4A6-204ENST00000461897 CENPEQ02224 2701 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 CRXO43186 299 aaPredicted RBP9.83□□□□□ -0.84
COL4A6-204ENST00000461897 TOX4O94842 621 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 TCRAP04437 139 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 BTF3P20290 206 aaKnown RBP9.83□□□□□ -0.84
COL4A6-204ENST00000461897 NTF3P20783 257 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 COL8A1P27658 744 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 EBLN2Q6P2I7 272 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 C16orf54Q6UWD8 224 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 OR1B1Q8NGR6 318 aa9.83□□□□□ -0.84
COL4A6-204ENST00000461897 PLXNB1O43157 2135 aa9.82□□□□□ -0.84
COL4A6-204ENST00000461897 MAP1AP78559 2803 aaPredicted RBP9.82□□□□□ -0.84
COL4A6-204ENST00000461897 TRAV9-2A0A087WT02 112 aa9.82□□□□□ -0.84
COL4A6-204ENST00000461897 IGHV3-48P01763 117 aa9.82□□□□□ -0.84
COL4A6-204ENST00000461897 ORM2P19652 201 aa9.82□□□□□ -0.84
COL4A6-204ENST00000461897 CEACAM3P40198 252 aa9.82□□□□□ -0.84
COL4A6-204ENST00000461897 PRR27Q6MZM9 219 aa9.82□□□□□ -0.84
COL4A6-204ENST00000461897 DYNAPQ8N1N2 210 aa9.82□□□□□ -0.84
COL4A6-204ENST00000461897 CHCHD1Q96BP2 118 aaKnown RBP9.82□□□□□ -0.84
COL4A6-204ENST00000461897 URB1-AS1Q96HZ7 61 aa9.82□□□□□ -0.84
COL4A6-204ENST00000461897 OTORQ9NRC9 128 aa9.82□□□□□ -0.84
COL4A6-204ENST00000461897 LAMTOR2Q9Y2Q5 125 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms