RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 MSMO1Q15800 293 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 NNATQ16517 81 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 RPL13AP3Q6NVV1 102 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 TOMM20LQ6UXN7 152 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 UNQ6190/PRO20217Q6UXQ8 127 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 LCA10Q71F78 164 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 TMEM229BQ8NBD8 167 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 TSTD1Q8NFU3 115 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 PLEKHB2Q96CS7 222 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 ADAT3Q96EY9 351 aaPredicted RBP1.11□□□□□ -2.23
HDAC6-212ENST00000461608 BORCS8Q96FH0 119 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 GPX7Q96SL4 187 aaPredicted RBP1.11□□□□□ -2.23
HDAC6-212ENST00000461608 TMEM70Q9BUB7 260 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 SMIM3Q9BZL3 60 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 OR2J1Q9GZK6 312 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 PBOV1Q9GZY1 135 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 POPDC3Q9HBV1 291 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 OTORQ9NRC9 128 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 OSTCQ9NRP0 149 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 OR5AC2Q9NZP5 309 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 COPZ2Q9P299 210 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 EPDR1Q9UM22 224 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 NUBP2Q9Y5Y2 271 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 RGS12O14924 1447 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 RIC1Q4ADV7 1423 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 UACAQ9BZF9 1416 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 NEO1Q92859 1461 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 WDR7Q9Y4E6 1490 aa1.11□□□□□ -2.23
HDAC6-212ENST00000461608 CPAMD8Q8IZJ3 1885 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 WDR90Q96KV7 1748 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 IQGAP2Q13576 1575 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 TTC37Q6PGP7 1564 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 UHRF1BP1Q6BDS2 1440 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 CD109Q6YHK3 1445 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 YTHDC2Q9H6S0 1430 aaKnown RBP1.1□□□□□ -2.23
HDAC6-212ENST00000461608 TRAV36DV7A0A075B6V5 113 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 C7orf71A4D174 169 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 C9JAW5 83 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 TAX1BP3O14907 124 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 CYB5BO43169 146 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 TNFSF15O95150 251 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 MT-ND4LP03901 98 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 CLPSP04118 112 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 CXCL1P09341 107 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 BAALC-AS2P0C853 105 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 UBBP0CG47 229 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 OGNP20774 298 aaKnown RBP1.1□□□□□ -2.23
HDAC6-212ENST00000461608 S100A1P23297 94 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 FKBP2P26885 142 aaKnown RBP1.1□□□□□ -2.23
HDAC6-212ENST00000461608 TMBIM6P55061 237 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 NEDD8Q15843 81 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 DEFB115Q30KQ5 88 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 SCGB2B2Q4G0G5 96 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 KHDC3LQ587J8 217 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 CROCCP2Q86T23 111 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 SIGLECL1Q8N7X8 197 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 OR5A1Q8NGJ0 315 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 OR8D4Q8NGM9 314 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 WFDC5Q8TCV5 224 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 CGREF1Q99674 301 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 OR2H1Q9GZK4 316 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 IMUPQ9GZP8 106 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 TMEM126AQ9H061 195 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 SPANXA1Q9NS26 97 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 HIGD1AQ9Y241 93 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 RNF11Q9Y3C5 154 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 MED31Q9Y3C7 131 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 SOX21Q9Y651 276 aaPredicted RBP1.1□□□□□ -2.23
HDAC6-212ENST00000461608 U3KQ87 197 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 MAST2Q6P0Q8 1798 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 KIAA0556O60303 1618 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 ABCA9Q8IUA7 1624 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 FANCAO15360 1455 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 CTTNBP2Q8WZ74 1663 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 DOCK3Q8IZD9 2030 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 UGGT2Q9NYU1 1516 aa1.1□□□□□ -2.23
HDAC6-212ENST00000461608 RICTORQ6R327 1708 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 ABCA8O94911 1581 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 FRMPD1Q5SYB0 1578 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 NCOA3Q9Y6Q9 1424 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 A0A087X0T9 212 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 IGKV3D-7A0A0C4DH55 119 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 IGKV3OR2-268A0A0C4DH90 116 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 LOC107984640A0A0U1RRK4 108 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 C5orf58C9J3I9 102 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 GABARAPH6UMI1 98 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 TMEM256-PLSCR3K7ERE1 68 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 M0R378 163 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 LYZL6O75951 148 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 GADD45GO95257 159 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 TRGC2P03986 189 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 CTSDP07339 412 aaPredicted RBP1.09□□□□□ -2.23
HDAC6-212ENST00000461608 FABP2P12104 132 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 RAB5CP51148 216 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 DNAJB13P59910 316 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 RPS28P62857 69 aaKnown RBP1.09□□□□□ -2.23
HDAC6-212ENST00000461608 EIF5AP63241 154 aaKnown RBP1.09□□□□□ -2.23
HDAC6-212ENST00000461608 RHOGP84095 191 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 ZNF846Q147U1 533 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 SPCS2Q15005 226 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms