RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 TMEM256Q8N2U0 113 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 CYTL1Q9NRR1 136 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 IGKV1D-8A0A087WSZ0 117 aa7.34□□□□□ -1.24
BRCA1-205ENST00000461221 I3L3M4 83 aa7.34□□□□□ -1.24
BRCA1-205ENST00000461221 THAP8Q8NA92 274 aa7.34□□□□□ -1.24
BRCA1-205ENST00000461221 ZNF492Q9P255 531 aa7.34□□□□□ -1.24
BRCA1-205ENST00000461221 TMEM75Q8N9X5 138 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 KNL1Q8NG31 2342 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 DEFB104AQ8WTQ1 72 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 TRBV6-6A0A0A6YYG2 114 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 TRAV25A0A0B4J276 109 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 CRLF1O75462 422 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 DAD1P61803 113 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 TP53TG1Q9Y2A0 90 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 LAMB2P55268 1798 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 KLF5Q13887 457 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-205ENST00000461221 RPP25LQ8N5L8 163 aaKnown RBP7.33□□□□□ -1.24
BRCA1-205ENST00000461221 SIGLEC9Q9Y336 463 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 MSRB2Q9Y3D2 182 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 STRCP1A6NGW2 1772 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 DLEC1Q9Y238 1755 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 SMKR1H3BMG3 65 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 OR11H6Q8NGC7 330 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 SHANK2-AS3Q9BTD1 123 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 HEATR5BQ9P2D3 2071 aa7.33□□□□□ -1.24
BRCA1-205ENST00000461221 Q8N8P6 123 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 PTPRZ1P23471 2315 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-205ENST00000461221 IGKV1-12A0A0C4DH73 117 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 FAM231BA6NCW3 169 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 IGKV1D-12P01611 117 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 ARMS2P0C7Q2 107 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 LINC01356Q8N9X3 169 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 SELENOKQ9Y6D0 94 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 NHSL1Q5SYE7 1610 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 PLXNB2O15031 1838 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 J3QRE1 110 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 IGKV1-5P01602 117 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 MAJINQ3KP22 176 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 TRAV13-2A0A0B4J235 113 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 IFITM1P13164 125 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 CD177Q8N6Q3 437 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 PRSS46E5RG02 174 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 F5H768 121 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 Q0VG73 95 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 TAL2Q16559 108 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 NABP1Q96AH0 204 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 SCRT2Q9NQ03 307 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 ASXL3Q9C0F0 2248 aa7.32□□□□□ -1.24
BRCA1-205ENST00000461221 TDRD15B5MCY1 1934 aaKnown RBP7.31□□□□□ -1.24
BRCA1-205ENST00000461221 GAGE12JA6NER3 117 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 LYPD3O95274 346 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 GAGE1Q13065 139 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 GAGE4Q13068 117 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 GAGE5Q13069 117 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 SPACA3Q8IXA5 215 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 GAFA1Q96PS6 74 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 F8W1H4 67 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 NDUFB8O95169 186 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 PRB4P10163 310 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-205ENST00000461221 DEFB131AP59861 70 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 SLAQ13239 276 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 TMEM243Q9BU79 118 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 TRAV3A0A0B4J244 114 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 NTF4P34130 210 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 PFN2P35080 140 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 C3orf56Q8N813 242 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 PKIGQ9Y2B9 76 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 C2orf66Q6UXQ4 117 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 SMIM2Q9BVW6 85 aa7.31□□□□□ -1.24
BRCA1-205ENST00000461221 RP1L1Q8IWN7 2480 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-205ENST00000461221 LHBP01229 141 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 HGFACQ04756 655 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 BRD3OSQ6XYD6 125 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 FGFBP3Q8TAT2 258 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 C9orf118A6NHY6 69 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 CGB3P0DN86 165 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 RNASE2P10153 161 aaKnown RBP7.3□□□□□ -1.24
BRCA1-205ENST00000461221 ATG2BQ96BY7 2078 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 PINLYPA6NC86 204 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 IGHG4P01861 327 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 GFI1Q99684 422 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 LINC01619G3V211 115 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 OVOL3O00110 214 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 PFN1P07737 140 aaKnown RBP7.3□□□□□ -1.24
BRCA1-205ENST00000461221 GATA3P23771 443 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 PRR31Q5SQ13 230 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 KIAA1217Q5T5P2 1943 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 OTOFQ9HC10 1997 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 PSPNO60542 156 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 CFPP27918 469 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 ZFP36L1Q07352 338 aaKnown RBP7.3□□□□□ -1.24
BRCA1-205ENST00000461221 IGFL4Q6B9Z1 124 aa7.3□□□□□ -1.24
BRCA1-205ENST00000461221 FAM110DQ8TAY7 271 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-205ENST00000461221 AZU1P20160 251 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 APOC4P55056 127 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 SYNJ2BPP57105 145 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 ANKRD36A6QL64 1941 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 IGHV1-24A0A0C4DH33 117 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 C15orf62A8K5M9 175 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 NDUFS5O43920 106 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms