RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 LINC00305Q7Z4B0 112 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 DEFB128Q7Z7B8 93 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 OR8I2Q8N0Y5 310 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 SLC30A7Q8NEW0 376 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 OR5D16Q8NGK9 328 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 RNASE11Q8TAA1 199 aaKnown RBP0.91□□□□□ -2.26
SYPL1-203ENST00000460770 ZC2HC1AQ96GY0 325 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 CARD19Q96LW7 228 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 SLC25A21Q9BQT8 299 aaPredicted RBP0.91□□□□□ -2.26
SYPL1-203ENST00000460770 VPS25Q9BRG1 176 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 OR2H1Q9GZK4 316 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 CST9LQ9H4G1 147 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 BCL2L10Q9HD36 194 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 OTORQ9NRC9 128 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 RASL12Q9NYN1 266 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 HSPB8Q9UJY1 196 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 JPT1Q9UK76 154 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 MED31Q9Y3C7 131 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 ARHGEF10O15013 1369 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 MED1Q15648 1581 aaPredicted RBP0.91□□□□□ -2.26
SYPL1-203ENST00000460770 FANCMQ8IYD8 2048 aa0.91□□□□□ -2.26
SYPL1-203ENST00000460770 RTEL1-TNFRSF6BF6WH68 1400 aa0.9□□□□□ -2.26
SYPL1-203ENST00000460770 SOGA1O94964 1423 aa0.9□□□□□ -2.26
SYPL1-203ENST00000460770 KDM5BQ9UGL1 1544 aa0.9□□□□□ -2.26
SYPL1-203ENST00000460770 COL11A1P12107 1806 aaPredicted RBP0.9□□□□□ -2.27
SYPL1-203ENST00000460770 CEP192Q8TEP8 1941 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 TRAV36DV7A0A075B6V5 113 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 TRAV1-1A0A0B4J248 108 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 TRAV5A0A0B4J249 113 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 TRDV1A0A1B0GX56 115 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 EFCAB10A6NFE3 127 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 IBA57-AS1B1ANH7 110 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 C9JAW5 83 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 LY6LH3BQJ8 138 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 H3BRN7 92 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 GABARAPH6UMI1 98 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 OVOL1O14753 267 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 RER1O15258 196 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 ZNF737O75373 536 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 DPM2O94777 84 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 CLPSP04118 112 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 CTSDP07339 412 aaPredicted RBP0.9□□□□□ -2.27
SYPL1-203ENST00000460770 PAEPP09466 180 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 COX6A1P12074 109 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 RNASE4P34096 147 aaKnown RBP0.9□□□□□ -2.27
SYPL1-203ENST00000460770 RPL35P42766 123 aaKnown RBP0.9□□□□□ -2.27
SYPL1-203ENST00000460770 POLR2HP52434 150 aaKnown RBP0.9□□□□□ -2.27
SYPL1-203ENST00000460770 LSM3P62310 102 aaKnown RBP0.9□□□□□ -2.27
SYPL1-203ENST00000460770 PSPHP78330 225 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 OR8B8Q15620 311 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 SMIM21Q3B7S5 101 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 HRCT1Q6UXD1 115 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 C7orf65Q6ZTY9 151 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 TCTE3Q8IZS6 198 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 TSTD1Q8NFU3 115 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 OR2T35Q8NGX2 323 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 TXNDC17Q9BRA2 123 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 SLC50A1Q9BRV3 221 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 TTTY12Q9BZ98 90 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 SMIM3Q9BZL3 60 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 TAS2R4Q9NYW5 299 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 HIGD1AQ9Y241 93 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 HS3ST2Q9Y278 367 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 RNF11Q9Y3C5 154 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 LY96Q9Y6Y9 160 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 SCAF11Q99590 1463 aaKnown RBP0.9□□□□□ -2.27
SYPL1-203ENST00000460770 SBF1O95248 1867 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 PLXNA3P51805 1871 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 POLEQ07864 2286 aa0.9□□□□□ -2.27
SYPL1-203ENST00000460770 TECPR2O15040 1411 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 RIC1Q4ADV7 1423 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 SETD5Q9C0A6 1442 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 RIMBP3CA6NJZ7 1639 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 RIMBP3BA6NNM3 1639 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 RIMBP3Q9UFD9 1639 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 ARHGEF28Q8N1W1 1705 aaKnown RBP0.89□□□□□ -2.27
SYPL1-203ENST00000460770 FER1L6Q2WGJ9 1857 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 ANKRD31Q8N7Z5 1873 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 PXDNLA1KZ92 1463 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 TRAV13-1A0A0B4J241 112 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 A0A1B0GX51 115 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 A8MWV9 139 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 H7BYZ3 331 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 K7ERJ3 54 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 K7ERU9 68 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 LYRM1O43325 122 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 HIST1H2BKO60814 126 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 TIMM17BO60830 172 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 SMIM24O75264 130 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 SULT1C4O75897 302 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 PROSCO94903 275 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 TNFSF15O95150 251 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 CRPP02741 224 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 C1QCP02747 245 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 HIST1H2BJP06899 126 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 RPS3P23396 243 aaKnown RBP eCLIP0.89□□□□□ -2.272e-8■■■■■ 45.7
SYPL1-203ENST00000460770 SDC4P31431 198 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 FUSP35637 526 aaKnown RBP eCLIP0.89□□□□□ -2.27
SYPL1-203ENST00000460770 ESRGQ1W209 222 aa0.89□□□□□ -2.27
SYPL1-203ENST00000460770 VMA21Q3ZAQ7 101 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms