RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 FAM223BA6NKX1 122 aa13.09□□□□□ -0.31
HDAC7-217ENST00000459625 FAM223AQ8IWN6 122 aa13.09□□□□□ -0.31
HDAC7-217ENST00000459625 CHD5Q8TDI0 1954 aa13.08□□□□□ -0.31
HDAC7-217ENST00000459625 IGHV4-4A0A075B6R2 117 aa13.08□□□□□ -0.32
HDAC7-217ENST00000459625 MST1P26927 711 aa13.08□□□□□ -0.32
HDAC7-217ENST00000459625 TRAV12-1A0A0B4J245 112 aa13.08□□□□□ -0.32
HDAC7-217ENST00000459625 PLEKHB2Q96CS7 222 aa13.08□□□□□ -0.32
HDAC7-217ENST00000459625 A0A1B0GWJ7 208 aa13.08□□□□□ -0.32
HDAC7-217ENST00000459625 GAFA1Q96PS6 74 aa13.08□□□□□ -0.32
HDAC7-217ENST00000459625 E7EQL1 145 aa13.08□□□□□ -0.32
HDAC7-217ENST00000459625 CD5LO43866 347 aa13.08□□□□□ -0.32
HDAC7-217ENST00000459625 MST1LQ2TV78 715 aa13.08□□□□□ -0.32
HDAC7-217ENST00000459625 CEP290O15078 2479 aa13.08□□□□□ -0.32
HDAC7-217ENST00000459625 IGKV1-39P01597 117 aa13.07□□□□□ -0.32
HDAC7-217ENST00000459625 PPBPP02775 128 aa13.07□□□□□ -0.32
HDAC7-217ENST00000459625 IGKV1D-39P04432 117 aa13.07□□□□□ -0.32
HDAC7-217ENST00000459625 UBE2E1P51965 193 aa13.07□□□□□ -0.32
HDAC7-217ENST00000459625 TRBV25-1A0A075B6N4 114 aa13.07□□□□□ -0.32
HDAC7-217ENST00000459625 ANGP03950 147 aaKnown RBP13.07□□□□□ -0.32
HDAC7-217ENST00000459625 TMEM158Q8WZ71 300 aa13.07□□□□□ -0.32
HDAC7-217ENST00000459625 DAZ1Q9NQZ3 744 aaKnown RBP13.07□□□□□ -0.32
HDAC7-217ENST00000459625 PRSS29PA6NIE9 313 aa13.07□□□□□ -0.32
HDAC7-217ENST00000459625 MLANAQ16655 118 aa13.07□□□□□ -0.32
HDAC7-217ENST00000459625 TNFRSF14Q92956 283 aa13.07□□□□□ -0.32
HDAC7-217ENST00000459625 LAMB2P55268 1798 aa13.07□□□□□ -0.32
HDAC7-217ENST00000459625 A0A1W2PRE2 83 aa13.07□□□□□ -0.32
HDAC7-217ENST00000459625 H0YJW9 148 aa13.07□□□□□ -0.32
HDAC7-217ENST00000459625 LY75O60449 1722 aa13.07□□□□□ -0.32
HDAC7-217ENST00000459625 IGKV1-9A0A0C4DH69 117 aa13.07□□□□□ -0.32
HDAC7-217ENST00000459625 ATP6V0E1O15342 81 aa13.07□□□□□ -0.32
HDAC7-217ENST00000459625 SRSF3P84103 164 aaKnown RBP13.06□□□□□ -0.32
HDAC7-217ENST00000459625 SLC25A48Q6ZT89 311 aaKnown RBP13.06□□□□□ -0.32
HDAC7-217ENST00000459625 C9orf139Q6ZV77 190 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 ARFGEF3Q5TH69 2177 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 MYMXA0A1B0GTQ4 84 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 ERVH48-1M5A8F1 160 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 CD5P06127 495 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 ALPK2Q86TB3 2170 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 M0R1W7 72 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 TSKUQ8WUA8 353 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 LAMTOR2Q9Y2Q5 125 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 COX11Q9Y6N1 276 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 G3V318 75 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 POLEQ07864 2286 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 A0A0A6YYD4 124 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 hDV102S1A0JD36 115 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 SHISA3A0PJX4 238 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 Q6ZQT7 251 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 ZNRF2Q8NHG8 242 aa13.06□□□□□ -0.32
HDAC7-217ENST00000459625 IGKV1D-8A0A087WSZ0 117 aa13.05□□□□□ -0.32
HDAC7-217ENST00000459625 RPL18AQ02543 176 aaKnown RBP13.05□□□□□ -0.32
HDAC7-217ENST00000459625 NHLRC3Q5JS37 347 aa13.05□□□□□ -0.32
HDAC7-217ENST00000459625 IL18BPO95998 194 aa13.05□□□□□ -0.32
HDAC7-217ENST00000459625 HEPN1Q6WQI6 88 aa13.05□□□□□ -0.32
HDAC7-217ENST00000459625 CACNA1IQ9P0X4 2223 aa13.05□□□□□ -0.32
HDAC7-217ENST00000459625 A6NNC1 897 aa13.05□□□□□ -0.32
HDAC7-217ENST00000459625 TREML4Q6UXN2 200 aa13.05□□□□□ -0.32
HDAC7-217ENST00000459625 LINC00271P0C7V0 271 aa13.05□□□□□ -0.32
HDAC7-217ENST00000459625 SCRT2Q9NQ03 307 aa13.05□□□□□ -0.32
HDAC7-217ENST00000459625 MMP23AO75900 390 aa13.04□□□□□ -0.32
HDAC7-217ENST00000459625 CD200R1LQ6Q8B3 271 aa13.04□□□□□ -0.32
HDAC7-217ENST00000459625 MGST2Q99735 147 aa13.04□□□□□ -0.32
HDAC7-217ENST00000459625 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.04□□□□□ -0.32
HDAC7-217ENST00000459625 NTN3O00634 580 aaPredicted RBP13.04□□□□□ -0.32
HDAC7-217ENST00000459625 RNASE13Q5GAN3 156 aaKnown RBP13.04□□□□□ -0.32
HDAC7-217ENST00000459625 GGNQ86UU5 652 aa13.04□□□□□ -0.32
HDAC7-217ENST00000459625 WFDC1Q9HC57 220 aa13.04□□□□□ -0.32
HDAC7-217ENST00000459625 SUPT4H1P63272 117 aaKnown RBP13.04□□□□□ -0.32
HDAC7-217ENST00000459625 TIMM17AQ99595 171 aa13.04□□□□□ -0.32
HDAC7-217ENST00000459625 LIME1Q9H400 295 aa13.04□□□□□ -0.32
HDAC7-217ENST00000459625 PSG3Q16557 428 aa13.04□□□□□ -0.32
HDAC7-217ENST00000459625 DOCK10Q96BY6 2186 aa13.03□□□□□ -0.32
HDAC7-217ENST00000459625 TCTEX1D4Q5JR98 221 aa13.03□□□□□ -0.32
HDAC7-217ENST00000459625 SIGLEC9Q9Y336 463 aa13.03□□□□□ -0.32
HDAC7-217ENST00000459625 OSTCQ9NRP0 149 aa13.03□□□□□ -0.32
HDAC7-217ENST00000459625 CFHR2P36980 270 aa13.03□□□□□ -0.32
HDAC7-217ENST00000459625 BCL6BQ8N143 479 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-217ENST00000459625 C8orf49Q96NF6 230 aa13.03□□□□□ -0.32
HDAC7-217ENST00000459625 SMIM2Q9BVW6 85 aa13.03□□□□□ -0.32
HDAC7-217ENST00000459625 RPRMLQ8N4K4 120 aa13.03□□□□□ -0.32
HDAC7-217ENST00000459625 SRRM5B3KS81 715 aa13.02□□□□□ -0.32
HDAC7-217ENST00000459625 RMI2Q96E14 147 aa13.02□□□□□ -0.32
HDAC7-217ENST00000459625 SPOCK3Q9BQ16 436 aa13.02□□□□□ -0.32
HDAC7-217ENST00000459625 DNAJC30Q96LL9 226 aa13.02□□□□□ -0.32
HDAC7-217ENST00000459625 RFNGQ9Y644 331 aa13.02□□□□□ -0.32
HDAC7-217ENST00000459625 HAMPP81172 84 aa13.02□□□□□ -0.33
HDAC7-217ENST00000459625 AMN1Q8IY45 258 aa13.02□□□□□ -0.33
HDAC7-217ENST00000459625 COL4A5P29400 1685 aa13.02□□□□□ -0.33
HDAC7-217ENST00000459625 ZNF236Q9UL36 1845 aa13.02□□□□□ -0.33
HDAC7-217ENST00000459625 IGKV1-12A0A0C4DH73 117 aa13.02□□□□□ -0.33
HDAC7-217ENST00000459625 IGKV1D-12P01611 117 aa13.02□□□□□ -0.33
HDAC7-217ENST00000459625 HGFACQ04756 655 aa13.02□□□□□ -0.33
HDAC7-217ENST00000459625 LINC00518Q8N0U6 118 aa13.02□□□□□ -0.33
HDAC7-217ENST00000459625 IGLV3-19P01714 112 aa13.02□□□□□ -0.33
HDAC7-217ENST00000459625 FAM90A2PQ658T7 463 aa13.02□□□□□ -0.33
HDAC7-217ENST00000459625 TMEM242Q9NWH2 141 aa13.02□□□□□ -0.33
HDAC7-217ENST00000459625 GUSBP1Q15486 140 aa13.01□□□□□ -0.33
HDAC7-217ENST00000459625 NEGR1Q7Z3B1 354 aa13.01□□□□□ -0.33
HDAC7-217ENST00000459625 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.01□□□□□ -0.33
HDAC7-217ENST00000459625 ARMS2P0C7Q2 107 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms