RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 CARD19Q96LW7 228 aa7.8□□□□□ -1.16
LINC01940-201ENST00000455228 PATE3B3GLJ2 98 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 GCHFRP30047 84 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 SPACA3Q8IXA5 215 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 PPDPFLQ8WWR9 84 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 SSBP3Q9BWW4 388 aaPredicted RBP7.79□□□□□ -1.16
LINC01940-201ENST00000455228 IGHV3-13P01766 116 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 WDR31Q8NA23 367 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 RITA1Q96K30 269 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 MGST2Q99735 147 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 SAP30LQ9HAJ7 183 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 PRO0628Q9UI54 55 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 RIF1Q5UIP0 2472 aaKnown RBP7.79□□□□□ -1.16
LINC01940-201ENST00000455228 K7EN84 100 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 ACTL6BO94805 426 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 FRMD6-AS1P0C7T7 363 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 AMTNQ6UX39 209 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 Q8N7P7 452 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 OR10J6PQ8NGY7 276 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 PRADC1Q9BSG0 188 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 ENY2Q9NPA8 101 aa7.79□□□□□ -1.16
LINC01940-201ENST00000455228 GGTLC3B5MD39 225 aa7.78□□□□□ -1.16
LINC01940-201ENST00000455228 MALP21145 153 aa7.78□□□□□ -1.16
LINC01940-201ENST00000455228 FOXF2Q12947 444 aa7.78□□□□□ -1.16
LINC01940-201ENST00000455228 Q5XG85 94 aa7.78□□□□□ -1.16
LINC01940-201ENST00000455228 PMS2CLQ68D20 193 aa7.78□□□□□ -1.16
LINC01940-201ENST00000455228 AJUBAQ96IF1 538 aa7.78□□□□□ -1.16
LINC01940-201ENST00000455228 IGLL5B9A064 214 aa7.78□□□□□ -1.16
LINC01940-201ENST00000455228 EIF4EBP1Q13541 118 aaPredicted RBP7.78□□□□□ -1.16
LINC01940-201ENST00000455228 RNASEKQ6P5S7 137 aaKnown RBP7.78□□□□□ -1.16
LINC01940-201ENST00000455228 NAA38Q9BRA0 125 aaKnown RBP7.78□□□□□ -1.16
LINC01940-201ENST00000455228 DCTN5Q9BTE1 182 aa7.78□□□□□ -1.16
LINC01940-201ENST00000455228 DEFB127Q9H1M4 99 aa7.78□□□□□ -1.16
LINC01940-201ENST00000455228 NDUFS7O75251 213 aa7.77□□□□□ -1.16
LINC01940-201ENST00000455228 WISP2O76076 250 aa7.77□□□□□ -1.16
LINC01940-201ENST00000455228 STPG3Q8N7X2 389 aa7.77□□□□□ -1.16
LINC01940-201ENST00000455228 MAFAQ8NHW3 353 aaPredicted RBP7.77□□□□□ -1.16
LINC01940-201ENST00000455228 S1PR3Q99500 378 aa7.77□□□□□ -1.16
LINC01940-201ENST00000455228 PLEKHA3Q9HB20 300 aa7.77□□□□□ -1.16
LINC01940-201ENST00000455228 OSTCQ9NRP0 149 aa7.77□□□□□ -1.16
LINC01940-201ENST00000455228 ARL2-SNX15V9GYD0 113 aa7.77□□□□□ -1.16
LINC01940-201ENST00000455228 LINC01619G3V211 115 aa7.77□□□□□ -1.17
LINC01940-201ENST00000455228 J3QLI3 93 aa7.77□□□□□ -1.17
LINC01940-201ENST00000455228 TIMM8AO60220 97 aaPredicted RBP7.77□□□□□ -1.17
LINC01940-201ENST00000455228 LYZL6O75951 148 aa7.77□□□□□ -1.17
LINC01940-201ENST00000455228 IBA57Q5T440 356 aaKnown RBP7.77□□□□□ -1.17
LINC01940-201ENST00000455228 UBTD1Q9HAC8 227 aa7.77□□□□□ -1.17
LINC01940-201ENST00000455228 PROCRQ9UNN8 238 aa7.77□□□□□ -1.17
LINC01940-201ENST00000455228 MGST1P10620 155 aaKnown RBP7.77□□□□□ -1.17
LINC01940-201ENST00000455228 NTF3P20783 257 aa7.77□□□□□ -1.17
LINC01940-201ENST00000455228 DUTP33316 252 aaKnown RBP7.77□□□□□ -1.17
LINC01940-201ENST00000455228 KLF14Q8TD94 323 aaPredicted RBP7.77□□□□□ -1.17
LINC01940-201ENST00000455228 LINC00479Q96M42 142 aa7.77□□□□□ -1.17
LINC01940-201ENST00000455228 PRRC2CQ9Y520 2896 aaKnown RBP7.76□□□□□ -1.17
LINC01940-201ENST00000455228 HCFC1P51610 2035 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 APOA2P02652 100 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 FXYD3Q14802 87 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 ZNF718Q3SXZ3 478 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 CENPWQ5EE01 88 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 TEX36Q5VZQ5 186 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 PQLC2Q6ZP29 291 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 Q6ZR03 302 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 FZR1Q9UM11 496 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 IGHV1-24A0A0C4DH33 117 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 MBD3L4A6NDZ8 208 aaPredicted RBP7.76□□□□□ -1.17
LINC01940-201ENST00000455228 MBD3L3A6NE82 208 aaPredicted RBP7.76□□□□□ -1.17
LINC01940-201ENST00000455228 MBD3L5A6NJ08 208 aaPredicted RBP7.76□□□□□ -1.17
LINC01940-201ENST00000455228 IQCF6A8MYZ5 107 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 GFRA3O60609 400 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 ZNF688P0C7X2 276 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 TAL2Q16559 108 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 METRNQ9UJH8 293 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 TCF19Q9Y242 345 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 EP300Q09472 2414 aaPredicted RBP7.76□□□□□ -1.17
LINC01940-201ENST00000455228 TRAV3A0A0B4J244 114 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 A1L4Q6 167 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 NDUFA7O95182 113 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 GAGE2BQ13066 116 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 GAGE2EQ4V326 116 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 RPL39P5Q59GN2 51 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 RNASE7Q9H1E1 156 aaKnown RBP7.76□□□□□ -1.17
LINC01940-201ENST00000455228 CXXC4Q9H2H0 198 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 GAGE2DQ9UEU5 116 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 MUC3AQ02505 3323 aa7.76□□□□□ -1.17
LINC01940-201ENST00000455228 NPFFO15130 113 aa7.75□□□□□ -1.17
LINC01940-201ENST00000455228 HSBP1O75506 76 aa7.75□□□□□ -1.17
LINC01940-201ENST00000455228 TEN1Q86WV5 123 aa7.75□□□□□ -1.17
LINC01940-201ENST00000455228 TDHQ8IZJ6 230 aa7.75□□□□□ -1.17
LINC01940-201ENST00000455228 IDI2-AS1Q9NZ38 188 aa7.75□□□□□ -1.17
LINC01940-201ENST00000455228 PRR14LQ5THK1 2151 aa7.75□□□□□ -1.17
LINC01940-201ENST00000455228 SHISA9B4DS77 424 aa7.75□□□□□ -1.17
LINC01940-201ENST00000455228 DUSP14O95147 198 aaKnown RBP7.75□□□□□ -1.17
LINC01940-201ENST00000455228 PTPRBP23467 1997 aa7.75□□□□□ -1.17
LINC01940-201ENST00000455228 IZUMO1RA6ND01 250 aa7.75□□□□□ -1.17
LINC01940-201ENST00000455228 PIP4P2Q8N4L2 257 aa7.75□□□□□ -1.17
LINC01940-201ENST00000455228 KLF13Q9Y2Y9 288 aaPredicted RBP7.75□□□□□ -1.17
LINC01940-201ENST00000455228 BDP1A6H8Y1 2624 aa7.75□□□□□ -1.17
LINC01940-201ENST00000455228 LOC107984640A0A0U1RRK4 108 aa7.74□□□□□ -1.17
LINC01940-201ENST00000455228 MBNL2Q5VZF2 373 aaKnown RBP7.74□□□□□ -1.17
LINC01940-201ENST00000455228 MIR17HGQ75NE6 70 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms