RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 TMEM95Q3KNT9 176 aa3.75□□□□□ -1.81
RIF1-207ENST00000454583 TMEM219Q86XT9 240 aa3.75□□□□□ -1.81
RIF1-207ENST00000454583 FAM223AQ8IWN6 122 aa3.75□□□□□ -1.81
RIF1-207ENST00000454583 CHRDL1Q9BU40 450 aa3.75□□□□□ -1.81
RIF1-207ENST00000454583 SSBP4Q9BWG4 385 aaPredicted RBP3.75□□□□□ -1.81
RIF1-207ENST00000454583 CDC42EP3Q9UKI2 254 aa3.75□□□□□ -1.81
RIF1-207ENST00000454583 hCG_1809904A0A1W2PP81 198 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 A0A1W2PR64 198 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 A0A1W2PRV1 198 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 IFNA4P05014 189 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 FAM106CPP0CH98 169 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 SRP14P37108 136 aaKnown RBP3.74□□□□□ -1.81
RIF1-207ENST00000454583 RAB11AP62491 216 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 GDF5OSQ5U4N7 250 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 TEX38Q6PEX7 206 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 C4orf3Q8WVX3 66 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 RPEQ96AT9 228 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 URB1-AS1Q96HZ7 61 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 ELOVL1Q9BW60 279 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 ACTR3CQ9C0K3 210 aaPredicted RBP3.74□□□□□ -1.81
RIF1-207ENST00000454583 SRD5A3Q9H8P0 318 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 SLC25A22Q9H936 323 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 ROS1P08922 2347 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 NBASA2RRP1 2371 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 IGHV3OR16-10A0A075B7F0 116 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 A0A1W2PN81 502 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 SCO2A0A1W2PP80 73 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 CHRNA7P36544 502 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 ZNF616Q08AN1 781 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 ACOT6Q3I5F7 207 aaPredicted RBP3.74□□□□□ -1.81
RIF1-207ENST00000454583 AKR1C8PQ5T2L2 129 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 WFDC9Q8NEX5 89 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 TREM1Q9NP99 234 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 HEYLQ9NQ87 328 aaPredicted RBP3.74□□□□□ -1.81
RIF1-207ENST00000454583 MLXQ9UH92 298 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 SPTA1P02549 2419 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 NACAE9PAV3 2078 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 NUPL2O15504 423 aaKnown RBP3.74□□□□□ -1.81
RIF1-207ENST00000454583 CLN5O75503 358 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 IFNA5P01569 189 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 FRMD6-AS1P0C7T7 363 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 AKR1C3P42330 323 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 DEFA5Q01523 94 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 OR8G2PQ6IF36 304 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 OR4A16Q8NH70 328 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 FRZBQ92765 325 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 ANAPC16Q96DE5 110 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 UBE2E2Q96LR5 201 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 RYR3Q15413 4870 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 NAV2Q8IVL1 2488 aa3.74□□□□□ -1.81
RIF1-207ENST00000454583 C17orf112F2Z3M2 114 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 PAGE4O60829 102 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 CDX1P47902 265 aaPredicted RBP3.73□□□□□ -1.81
RIF1-207ENST00000454583 RPP30P78346 268 aaKnown RBP3.73□□□□□ -1.81
RIF1-207ENST00000454583 EGFEM1PQ0D2K5 195 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 USF2Q15853 346 aaPredicted RBP3.73□□□□□ -1.81
RIF1-207ENST00000454583 SOHLH1Q5JUK2 328 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 LURAP1LQ8IV03 231 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 OCC1Q8TAD7 63 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 GLMPQ8WWB7 406 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 GNG13Q9P2W3 67 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 RAB9AP51151 201 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 B2MP61769 119 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 SRSF2Q01130 221 aaKnown RBP3.73□□□□□ -1.81
RIF1-207ENST00000454583 TMEM183BQ1AE95 376 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 SIGLEC15Q6ZMC9 328 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 FAM24BQ8N5W8 94 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 ZNF586Q9NXT0 402 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 ZNF256Q9Y2P7 627 aaPredicted RBP3.73□□□□□ -1.81
RIF1-207ENST00000454583 TRAV41A0A0B4J266 112 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 TMEM213A2RRL7 107 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 C11orf94C9JXX5 98 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 ISLRO14498 428 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 APOA2P02652 100 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 OPN1MWP04001 364 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 OPN1MW2P0DN77 364 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 OPN1MW3P0DN78 364 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 CRIP1P50238 77 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 FXYD3Q14802 87 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 CDPF1Q6NVV7 123 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 LCN15Q6UWW0 184 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 UNQ9165/PRO28630Q6UXU0 137 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 DCANP1Q8TF63 244 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 RAX2Q96IS3 184 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 ZNF747Q9BV97 191 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 ZNF492Q9P255 531 aa3.73□□□□□ -1.81
RIF1-207ENST00000454583 TRAV5A0A0B4J249 113 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 K7EMT4 169 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 ZNF253O75346 499 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 RPL27AP46776 148 aaKnown RBP3.72□□□□□ -1.81
RIF1-207ENST00000454583 ELLP55199 621 aaPredicted RBP3.72□□□□□ -1.81
RIF1-207ENST00000454583 LINC00482Q8N8I6 264 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 IL17DQ8TAD2 202 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 CLUHP3Q96NS8 147 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 FAM103A1Q9BTL3 118 aaKnown RBP3.72□□□□□ -1.81
RIF1-207ENST00000454583 MRPL18Q9H0U6 180 aaKnown RBP3.72□□□□□ -1.81
RIF1-207ENST00000454583 CYB5BO43169 146 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 CSN3P07498 182 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 ELANEP08246 267 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 RPS16P62249 146 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms