RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 ALKBH7Q9BT30 221 aaPredicted RBP9.56□□□□□ -0.88
SMPD4-213ENST00000454468 C19orf24Q9BVV8 132 aa9.56□□□□□ -0.88
SMPD4-213ENST00000454468 ZNF785A8K8V0 405 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 CX3CL1P78423 397 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 TPTE2P1Q5T6R2 138 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 UNQ5815/PRO19632Q6UWF5 114 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 NAGKQ9UJ70 344 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 ZNF462Q96JM2 2506 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 CT45A10P0DMU9 189 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 PMCHL1Q16048 86 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 OR4A5Q8NH83 315 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 JKAMPQ9P055 326 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 F11RQ9Y624 299 aaKnown RBP9.55□□□□□ -0.88
SMPD4-213ENST00000454468 V9GYV3 84 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 HSBP1L1C9JCN9 74 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 HIST1H1EP10412 219 aaKnown RBP9.55□□□□□ -0.88
SMPD4-213ENST00000454468 CD99P14209 185 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 SSX8Q7RTT4 187 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 ZNF329Q86UD4 541 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 STXBP6Q8NFX7 210 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 BPESC1Q9GZL8 116 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 KAAG1Q9UBP8 84 aa9.55□□□□□ -0.88
SMPD4-213ENST00000454468 GPR183P32249 361 aa9.54□□□□□ -0.88
SMPD4-213ENST00000454468 RPL15P61313 204 aaKnown RBP9.54□□□□□ -0.88
SMPD4-213ENST00000454468 BRD3OSQ6XYD6 125 aa9.54□□□□□ -0.88
SMPD4-213ENST00000454468 BPIFA4PQ86YQ2 179 aa9.54□□□□□ -0.88
SMPD4-213ENST00000454468 FAM167A-AS1Q96KT0 104 aa9.54□□□□□ -0.88
SMPD4-213ENST00000454468 GCGP01275 180 aa9.54□□□□□ -0.88
SMPD4-213ENST00000454468 GBGT1Q8N5D6 347 aa9.54□□□□□ -0.88
SMPD4-213ENST00000454468 VAMP8Q9BV40 100 aa9.54□□□□□ -0.88
SMPD4-213ENST00000454468 SLC25A39Q9BZJ4 359 aaPredicted RBP9.54□□□□□ -0.88
SMPD4-213ENST00000454468 AAMDCQ9H7C9 122 aa9.54□□□□□ -0.88
SMPD4-213ENST00000454468 K7EQM0 130 aa9.54□□□□□ -0.88
SMPD4-213ENST00000454468 CSN1S1P47710 185 aa9.54□□□□□ -0.88
SMPD4-213ENST00000454468 ATP5IP56385 69 aaPredicted RBP9.54□□□□□ -0.88
SMPD4-213ENST00000454468 WDR73Q6P4I2 378 aa9.54□□□□□ -0.88
SMPD4-213ENST00000454468 TBL2Q9Y4P3 447 aaKnown RBP9.54□□□□□ -0.88
SMPD4-213ENST00000454468 BRS3P32247 399 aa9.53□□□□□ -0.88
SMPD4-213ENST00000454468 ARPC1AQ92747 370 aa9.53□□□□□ -0.88
SMPD4-213ENST00000454468 PYGO2Q9BRQ0 406 aa9.53□□□□□ -0.88
SMPD4-213ENST00000454468 IGKV1D-37A0A075B6S9 117 aa9.53□□□□□ -0.88
SMPD4-213ENST00000454468 C9JCJ5 164 aa9.53□□□□□ -0.88
SMPD4-213ENST00000454468 M0R2Z0 102 aa9.53□□□□□ -0.88
SMPD4-213ENST00000454468 IGLV1-47P01700 117 aa9.53□□□□□ -0.88
SMPD4-213ENST00000454468 RBX1P62877 108 aa9.53□□□□□ -0.88
SMPD4-213ENST00000454468 LDLRAD2Q5SZI1 272 aa9.53□□□□□ -0.88
SMPD4-213ENST00000454468 FXYD5Q96DB9 178 aa9.53□□□□□ -0.88
SMPD4-213ENST00000454468 DIRC3C9JPN6 131 aa9.53□□□□□ -0.88
SMPD4-213ENST00000454468 DLX6P56179 175 aa9.53□□□□□ -0.88
SMPD4-213ENST00000454468 ZNF841Q6ZN19 808 aa9.53□□□□□ -0.88
SMPD4-213ENST00000454468 LINC00311Q8N616 119 aa9.53□□□□□ -0.88
SMPD4-213ENST00000454468 RNF125Q96EQ8 232 aa9.53□□□□□ -0.88
SMPD4-213ENST00000454468 FBXL7Q9UJT9 491 aa9.53□□□□□ -0.88
SMPD4-213ENST00000454468 LOC389332A0A1B0GUA5 103 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 ZNF138P52744 262 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 Q6ZVH6 145 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 GPR82Q96P67 336 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 CHODLQ9H9P2 273 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 CDC42EP3Q9UKI2 254 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 GAGE1Q13065 139 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 BCL6BQ8N143 479 aaPredicted RBP9.52□□□□□ -0.89
SMPD4-213ENST00000454468 C5orf17Q8NAS9 161 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 C8orf46Q8TAG6 207 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 LINC00574Q9H8X3 128 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 OSTCQ9NRP0 149 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 CLEC5AQ9NY25 188 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 THYN1Q9P016 225 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 A1L4Q6 167 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 MFAP4P55083 255 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 RIPPLY3P57055 190 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 NUP35Q8NFH5 326 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 RCHY1Q96PM5 261 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 MCRIP2Q9BUT9 160 aaKnown RBP9.52□□□□□ -0.89
SMPD4-213ENST00000454468 C21orf62Q9NYP8 219 aa9.52□□□□□ -0.89
SMPD4-213ENST00000454468 DCHS2Q6V1P9 2916 aa9.51□□□□□ -0.89
SMPD4-213ENST00000454468 ZFP36P26651 326 aaKnown RBP9.51□□□□□ -0.89
SMPD4-213ENST00000454468 C5orf64Q2M2E5 130 aa9.51□□□□□ -0.89
SMPD4-213ENST00000454468 FAM120AOSQ5T036 256 aa9.51□□□□□ -0.89
SMPD4-213ENST00000454468 LCN12Q6JVE5 192 aa9.51□□□□□ -0.89
SMPD4-213ENST00000454468 ABCA2Q9BZC7 2435 aa9.51□□□□□ -0.89
SMPD4-213ENST00000454468 SLAQ13239 276 aa9.51□□□□□ -0.89
SMPD4-213ENST00000454468 TDRG1Q3Y452 100 aa9.51□□□□□ -0.89
SMPD4-213ENST00000454468 CCDC144NLQ6NUI1 221 aa9.51□□□□□ -0.89
SMPD4-213ENST00000454468 A8MWL6 223 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 G3V318 75 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 HLA-DQA1P01909 254 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 Q8TAT8 98 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 ORM1P02763 201 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 TCRAP04437 139 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 IGLC1P0CG04 106 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 FAM106CPP0CH98 169 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 HINT1P49773 126 aaPredicted RBP9.5□□□□□ -0.89
SMPD4-213ENST00000454468 HNRNPA3P51991 378 aaKnown RBP9.5□□□□□ -0.89
SMPD4-213ENST00000454468 CLEC19AQ6UXS0 136 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 DYNAPQ8N1N2 210 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 TNFRSF14Q92956 283 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 C11orf52Q96A22 123 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 TRGV9Q99603 122 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 PMCHL2Q9BQD1 86 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 HLA-DRB1P01911 266 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms