RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 C15orf53Q8NAA6 179 aa4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 ZNF738Q8NE65 137 aa4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 OR51S1Q8NGJ8 323 aa4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 OR52E5Q8NH55 327 aa4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 MCFD2Q8NI22 146 aa4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 ZFAND1Q8TCF1 268 aa4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 HSPB7Q9UBY9 170 aa4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SRRM2Q9UQ35 2752 aaKnown RBP4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 LRP1Q07954 4544 aaKnown RBP4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TRAV26-1A0A087WT03 109 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 H3BTX0 84 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 J3KRW8 73 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 RGS5O15539 181 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TMEM127O75204 238 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 CCNKO75909 580 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 GABARAPO95166 117 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 DNAH10OSP0CZ25 163 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 AKR1C4P17516 323 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 ORM2P19652 201 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 HOXA5P20719 270 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 NUP62P37198 522 aaPredicted RBP4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 IFITM3Q01628 133 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SMCO1Q147U7 214 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 C4orf46Q504U0 113 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 ETFRF1Q6IPR1 90 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 ACOT7LQ6ZUV0 252 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TMEM229BQ8NBD8 167 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 OR1B1Q8NGR6 318 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 OR1S1Q8NH92 325 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 BCL7BQ9BQE9 202 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TMPRSS5Q9H3S3 457 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SEPSECSQ9HD40 501 aaKnown RBP4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 NOP10Q9NPE3 64 aaKnown RBP4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 RPRMQ9NS64 109 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 MCUBQ9NWR8 336 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 ZNF586Q9NXT0 402 aa4.16□□□□□ -1.74
HLA-DPA3-207ENST00000454398 HMCN2Q8NDA2 5059 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SMCO3A2RU48 225 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ZNF98A6NK75 572 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 LYRM9A8MSI8 78 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 A8MTW9 85 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 GABARAPH6UMI1 98 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 UPK1BO75841 260 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ATP5G1P05496 136 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 GALR1P47211 349 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ATP5G3P48201 142 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 CCL18P55774 89 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 LINC00315P59091 139 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 DEFA1P59665 94 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 DEFA3P59666 94 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 RHOBP62745 196 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 IFITM2Q01629 132 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 AKR1C1Q04828 323 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 OR5I1Q13606 314 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 CTF1Q16619 201 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ZFP69Q49AA0 526 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TMED4Q7Z7H5 227 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SUN5Q8TC36 379 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SMIM4Q8WVI0 70 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 LINC01587Q99440 93 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TRGV9Q99603 122 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TMEM56-RWDD3S4R434 201 aa4.15□□□□□ -1.75
HLA-DPA3-207ENST00000454398 FAT3Q8TDW7 4589 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 LINC00854A0A1B0GVQ3 168 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 GAGE12BA1L429 117 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SNRPGP15A8MWD9 76 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 EPM2AB3EWF7 344 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 DISC1C4P0D8 188 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 PRSS46E5RG02 174 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 H3BRN7 92 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SLC17A3O00476 420 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 CTDSP2O14595 271 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 RGS13O14921 159 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 GAGE7O76087 117 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 PTTG1O95997 202 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 GAGE12FP0CL80 117 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 GAGE12GP0CL81 117 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 GAGE12IP0CL82 117 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 AKAIN1P0CW23 69 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 S100A5P33763 92 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 CCR6P51684 374 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 FAM3BP58499 235 aaPredicted RBP4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 IL18Q14116 193 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 C1orf194Q5T5A4 169 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 Q5VSD8 79 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 MZT2AQ6P582 158 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 THAP8Q8NA92 274 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 DYNC2LI1Q8TCX1 351 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 RNASE8Q8TDE3 154 aaKnown RBP4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 AP3S1Q92572 193 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 IL22RA2Q969J5 263 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 GNPNAT1Q96EK6 184 aaPredicted RBP4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 CLUHP3Q96NS8 147 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TMEM147Q9BVK8 224 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 Q9H3A6 140 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 Q9H8V8 135 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 GPR132Q9UNW8 380 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TNFRSF18Q9Y5U5 241 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 U3KQ87 197 aa4.14□□□□□ -1.75
HLA-DPA3-207ENST00000454398 UBR4Q5T4S7 5183 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms