RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 NAT8BQ9UHF3 227 aa1.72□□□□□ -2.13
HMGN3P1-201ENST00000453847 TRAPPC2LQ9UL33 140 aa1.72□□□□□ -2.13
HMGN3P1-201ENST00000453847 FHAD1B1AJZ9 1412 aa1.72□□□□□ -2.13
HMGN3P1-201ENST00000453847 MYH10P35580 1976 aa1.72□□□□□ -2.13
HMGN3P1-201ENST00000453847 COL11A1P12107 1806 aaPredicted RBP1.71□□□□□ -2.14
HMGN3P1-201ENST00000453847 TRAV12-1A0A0B4J245 112 aa1.71□□□□□ -2.14
HMGN3P1-201ENST00000453847 TRAV5A0A0B4J249 113 aa1.71□□□□□ -2.14
HMGN3P1-201ENST00000453847 A8MWV9 139 aa1.71□□□□□ -2.14
HMGN3P1-201ENST00000453847 ARPC5O15511 151 aa1.71□□□□□ -2.14
HMGN3P1-201ENST00000453847 HIST1H2BKO60814 126 aa1.71□□□□□ -2.14
HMGN3P1-201ENST00000453847 HIST1H2BJP06899 126 aa1.71□□□□□ -2.14
HMGN3P1-201ENST00000453847 EIF5AL1Q6IS14 154 aaKnown RBP1.71□□□□□ -2.14
HMGN3P1-201ENST00000453847 Q8N2B8 174 aa1.71□□□□□ -2.14
HMGN3P1-201ENST00000453847 Q8N814 137 aa1.71□□□□□ -2.14
HMGN3P1-201ENST00000453847 SKA2Q8WVK7 121 aaPredicted RBP1.71□□□□□ -2.14
HMGN3P1-201ENST00000453847 LINC00467Q9BRT7 94 aa1.71□□□□□ -2.14
HMGN3P1-201ENST00000453847 LAMTOR3Q9UHA4 124 aa1.71□□□□□ -2.14
HMGN3P1-201ENST00000453847 HSPB11Q9Y547 144 aa1.71□□□□□ -2.14
HMGN3P1-201ENST00000453847 FER1L6Q2WGJ9 1857 aa1.71□□□□□ -2.14
HMGN3P1-201ENST00000453847 RP1P56715 2156 aa1.71□□□□□ -2.14
HMGN3P1-201ENST00000453847 HEATR5BQ9P2D3 2071 aa1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 MEIKINA0A087WXM9 373 aa1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 TRBV6-5A0A0K0K1A5 114 aa1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 OVOL1O14753 267 aa1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 PFDN1O60925 122 aa1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 CST7O76096 145 aa1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 KRTAP12-3P60328 96 aa1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 EIF3IQ13347 325 aaKnown RBP1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 C10orf55Q5SWW7 151 aa1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 IFT20Q8IY31 132 aa1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 C12orf29Q8N999 325 aa1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 C15orf53Q8NAA6 179 aa1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 OR9Q1Q8NGQ5 310 aa1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 POP5Q969H6 163 aaKnown RBP1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 PLXNA4Q9HCM2 1894 aa1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 C14orf132Q9NPU4 83 aa1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 JPT1Q9UK76 154 aa1.7□□□□□ -2.14
HMGN3P1-201ENST00000453847 TCOF1Q13428 1488 aaKnown RBP1.69□□□□□ -2.14
HMGN3P1-201ENST00000453847 CEP152O94986 1710 aa1.69□□□□□ -2.14
HMGN3P1-201ENST00000453847 FAM107AO95990 144 aa1.69□□□□□ -2.14
HMGN3P1-201ENST00000453847 SCGB1A1P11684 91 aa1.69□□□□□ -2.14
HMGN3P1-201ENST00000453847 RPL35P42766 123 aaKnown RBP1.69□□□□□ -2.14
HMGN3P1-201ENST00000453847 MYL5Q02045 173 aa1.69□□□□□ -2.14
HMGN3P1-201ENST00000453847 OR8B8Q15620 311 aa1.69□□□□□ -2.14
HMGN3P1-201ENST00000453847 Q5XG85 94 aa1.69□□□□□ -2.14
HMGN3P1-201ENST00000453847 ISOC1Q96CN7 298 aa1.69□□□□□ -2.14
HMGN3P1-201ENST00000453847 CACYBPQ9HB71 228 aaKnown RBP1.69□□□□□ -2.14
HMGN3P1-201ENST00000453847 BATF3Q9NR55 127 aa1.69□□□□□ -2.14
HMGN3P1-201ENST00000453847 LAMTOR2Q9Y2Q5 125 aa1.69□□□□□ -2.14
HMGN3P1-201ENST00000453847 ARHGEF10O15013 1369 aa1.69□□□□□ -2.14
HMGN3P1-201ENST00000453847 RTL9Q8NET4 1388 aa1.69□□□□□ -2.14
HMGN3P1-201ENST00000453847 PCDH15Q96QU1 1955 aa1.68□□□□□ -2.14
HMGN3P1-201ENST00000453847 FREM1Q5H8C1 2179 aa1.68□□□□□ -2.14
HMGN3P1-201ENST00000453847 LAMB2P55268 1798 aa1.68□□□□□ -2.14
HMGN3P1-201ENST00000453847 J3KT08 172 aa1.68□□□□□ -2.14
HMGN3P1-201ENST00000453847 RER1O15258 196 aa1.68□□□□□ -2.14
HMGN3P1-201ENST00000453847 KLRD1Q13241 179 aa1.68□□□□□ -2.14
HMGN3P1-201ENST00000453847 C1orf134Q5TEV5 83 aa1.68□□□□□ -2.14
HMGN3P1-201ENST00000453847 LINC00471Q8N535 108 aa1.68□□□□□ -2.14
HMGN3P1-201ENST00000453847 OR5D16Q8NGK9 328 aa1.68□□□□□ -2.14
HMGN3P1-201ENST00000453847 ZNF714Q96N38 554 aa1.68□□□□□ -2.14
HMGN3P1-201ENST00000453847 NIT2Q9NQR4 276 aa1.68□□□□□ -2.14
HMGN3P1-201ENST00000453847 CHCHD2Q9Y6H1 151 aaPredicted RBP1.68□□□□□ -2.14
HMGN3P1-201ENST00000453847 RTTNQ86VV8 2226 aa1.68□□□□□ -2.14
HMGN3P1-201ENST00000453847 COL4A1P02462 1669 aa1.67□□□□□ -2.14
HMGN3P1-201ENST00000453847 COL24A1Q17RW2 1714 aa1.67□□□□□ -2.14
HMGN3P1-201ENST00000453847 LOC107984640A0A0U1RRK4 108 aa1.67□□□□□ -2.14
HMGN3P1-201ENST00000453847 KPNA4O00629 521 aaPredicted RBP1.67□□□□□ -2.14
HMGN3P1-201ENST00000453847 PROSCO94903 275 aa1.67□□□□□ -2.14
HMGN3P1-201ENST00000453847 FABP2P12104 132 aa1.67□□□□□ -2.14
HMGN3P1-201ENST00000453847 KRTAP5-9P26371 169 aa1.67□□□□□ -2.14
HMGN3P1-201ENST00000453847 RPS28P62857 69 aaKnown RBP1.67□□□□□ -2.14
HMGN3P1-201ENST00000453847 CROCCP2Q86T23 111 aa1.67□□□□□ -2.14
HMGN3P1-201ENST00000453847 TMEM35BQ8NCS4 154 aa1.67□□□□□ -2.14
HMGN3P1-201ENST00000453847 OR4K15Q8NH41 348 aa1.67□□□□□ -2.14
HMGN3P1-201ENST00000453847 SFT2D1Q8WV19 159 aa1.67□□□□□ -2.14
HMGN3P1-201ENST00000453847 CHCHD1Q96BP2 118 aaKnown RBP1.67□□□□□ -2.14
HMGN3P1-201ENST00000453847 SOX21Q9Y651 276 aaPredicted RBP1.67□□□□□ -2.14
HMGN3P1-201ENST00000453847 CEP192Q8TEP8 1941 aa1.67□□□□□ -2.14
HMGN3P1-201ENST00000453847 MYLKQ15746 1914 aa1.66□□□□□ -2.14
HMGN3P1-201ENST00000453847 TRAV36DV7A0A075B6V5 113 aa1.66□□□□□ -2.14
HMGN3P1-201ENST00000453847 TRAV14DV4A0A0A6YYC5 116 aa1.66□□□□□ -2.14
HMGN3P1-201ENST00000453847 IGHV1-58A0A0C4DH39 117 aa1.66□□□□□ -2.14
HMGN3P1-201ENST00000453847 TRBV7-6A0A0J9YX20 115 aa1.66□□□□□ -2.14
HMGN3P1-201ENST00000453847 A0A1B0GX51 115 aa1.66□□□□□ -2.14
HMGN3P1-201ENST00000453847 DHFRP00374 187 aa1.66□□□□□ -2.14
HMGN3P1-201ENST00000453847 SDC2P34741 201 aa1.66□□□□□ -2.14
HMGN3P1-201ENST00000453847 TMEM14EPQ6UXP3 125 aa1.66□□□□□ -2.14
HMGN3P1-201ENST00000453847 TEX29Q8N6K0 151 aa1.66□□□□□ -2.14
HMGN3P1-201ENST00000453847 TMEM229BQ8NBD8 167 aa1.66□□□□□ -2.14
HMGN3P1-201ENST00000453847 OVOS2A0A0G2JMS6 1433 aa1.66□□□□□ -2.14
HMGN3P1-201ENST00000453847 FAM135BQ49AJ0 1406 aa1.66□□□□□ -2.14
HMGN3P1-201ENST00000453847 IFNA4P05014 189 aa1.65□□□□□ -2.15
HMGN3P1-201ENST00000453847 GPX1P07203 203 aa1.65□□□□□ -2.15
HMGN3P1-201ENST00000453847 BRS3P32247 399 aa1.65□□□□□ -2.15
HMGN3P1-201ENST00000453847 PSG9Q00887 426 aa1.65□□□□□ -2.15
HMGN3P1-201ENST00000453847 VMA21Q3ZAQ7 101 aa1.65□□□□□ -2.15
HMGN3P1-201ENST00000453847 C1orf137Q5JT78 98 aa1.65□□□□□ -2.15
HMGN3P1-201ENST00000453847 CLECL1Q8IZS7 167 aa1.65□□□□□ -2.15
HMGN3P1-201ENST00000453847 OR2T35Q8NGX2 323 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms