RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 PIKFYVEQ9Y2I7 2098 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 PLXNA1Q9UIW2 1896 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 TRBV6-6A0A0A6YYG2 114 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 IGHV1-24A0A0C4DH33 117 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 VDAC2P45880 294 aaPredicted RBP6.25□□□□□ -1.41
RIF1-206ENST00000453091 Q6AWC8 147 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 TRAV8-4A0A0B4J246 113 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 SIGLEC15Q6ZMC9 328 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 VCX2Q9H322 139 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 LCTP09848 1927 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 SCN10AQ9Y5Y9 1956 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 PF4P02776 101 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 ERVK11-1P61568 191 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 SLC25A48Q6ZT89 311 aaKnown RBP6.25□□□□□ -1.41
RIF1-206ENST00000453091 A0A1B0GW15 77 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 TMEM8BA6NDV4 472 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 FCN3O75636 299 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 CFPP27918 469 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 GRNP28799 593 aaKnown RBP6.24□□□□□ -1.41
RIF1-206ENST00000453091 LAGE3Q14657 143 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 ZNF625Q96I27 306 aaPredicted RBP6.24□□□□□ -1.41
RIF1-206ENST00000453091 THSD7BQ9C0I4 1608 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 FAM90A9PA6NNJ1 464 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 MORN5Q5VZ52 161 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 CST9LQ9H4G1 147 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 CIRBPQ14011 172 aaKnown RBP6.24□□□□□ -1.41
RIF1-206ENST00000453091 DICER1Q9UPY3 1922 aaKnown RBP6.24□□□□□ -1.41
RIF1-206ENST00000453091 ESDP10768 282 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 C17orf58Q2M2W7 97 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 MS4A6AQ9H2W1 248 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 SRRM4A7MD48 611 aaKnown RBP6.24□□□□□ -1.41
RIF1-206ENST00000453091 C20orf144Q9BQM9 153 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 SIGLEC9Q9Y336 463 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 TRBV7-9A0A0J9YWB2 115 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 Q0VG73 95 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 CSTL1Q9H114 145 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 MOB4Q9Y3A3 225 aa6.24□□□□□ -1.41
RIF1-206ENST00000453091 E7EQL1 145 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 TOMM40O96008 361 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 ZNF688P0C7X2 276 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 NDUFS7O75251 213 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 NDUFB8O95169 186 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 SEC11AP67812 179 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 PAX8Q06710 450 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 ZNF876PQ49A33 203 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 TP73-AS1Q9UF72 201 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 TNFRSF6BO95407 300 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 NXT2Q9NPJ8 142 aaKnown RBP6.23□□□□□ -1.41
RIF1-206ENST00000453091 CNTRLQ7Z7A1 2325 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 TRAV21A0A0B4J279 112 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 OCIAD2Q56VL3 154 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 TSSC4Q9Y5U2 329 aaPredicted RBP6.23□□□□□ -1.41
RIF1-206ENST00000453091 BUB1B-PAK6H3BSN5 160 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 RAB9AP51151 201 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 TRAV41A0A0B4J266 112 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 G3V318 75 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 NPYP01303 97 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 Q6ZS49 121 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 SLC50A1Q9BRV3 221 aa6.23□□□□□ -1.41
RIF1-206ENST00000453091 MRPL27Q9P0M9 148 aaKnown RBP6.23□□□□□ -1.41
RIF1-206ENST00000453091 A8MWV9 139 aa6.22□□□□□ -1.41
RIF1-206ENST00000453091 TRGV9Q99603 122 aa6.22□□□□□ -1.41
RIF1-206ENST00000453091 NPFFR1Q9GZQ6 430 aa6.22□□□□□ -1.41
RIF1-206ENST00000453091 AMTNQ6UX39 209 aa6.22□□□□□ -1.41
RIF1-206ENST00000453091 TRGV2A0A075B6R0 118 aa6.22□□□□□ -1.41
RIF1-206ENST00000453091 DKK1O94907 266 aa6.22□□□□□ -1.41
RIF1-206ENST00000453091 GATA1P15976 413 aaPredicted RBP6.22□□□□□ -1.41
RIF1-206ENST00000453091 WT1-ASQ06250 92 aa6.22□□□□□ -1.41
RIF1-206ENST00000453091 KLK9Q9UKQ9 250 aa6.22□□□□□ -1.41
RIF1-206ENST00000453091 TEX29Q8N6K0 151 aa6.22□□□□□ -1.41
RIF1-206ENST00000453091 NEU4Q8WWR8 484 aaPredicted RBP6.22□□□□□ -1.41
RIF1-206ENST00000453091 TTTY13Q9BZ97 58 aa6.22□□□□□ -1.41
RIF1-206ENST00000453091 BPESC1Q9GZL8 116 aa6.22□□□□□ -1.41
RIF1-206ENST00000453091 DKK2Q9UBU2 259 aa6.22□□□□□ -1.41
RIF1-206ENST00000453091 DNAL4O96015 105 aa6.22□□□□□ -1.41
RIF1-206ENST00000453091 SCN4AP35499 1836 aa6.22□□□□□ -1.41
RIF1-206ENST00000453091 CD5LO43866 347 aa6.22□□□□□ -1.41
RIF1-206ENST00000453091 YPEL3P61236 119 aaPredicted RBP6.21□□□□□ -1.41
RIF1-206ENST00000453091 UBE2E2Q96LR5 201 aa6.21□□□□□ -1.41
RIF1-206ENST00000453091 SPXQ9BT56 116 aa6.21□□□□□ -1.41
RIF1-206ENST00000453091 LY96Q9Y6Y9 160 aa6.21□□□□□ -1.41
RIF1-206ENST00000453091 IGHV3-16A0A0C4DH30 117 aa6.21□□□□□ -1.41
RIF1-206ENST00000453091 CEACAM8P31997 349 aaPredicted RBP6.21□□□□□ -1.41
RIF1-206ENST00000453091 EFNA4P52798 201 aa6.21□□□□□ -1.41
RIF1-206ENST00000453091 FAM120AOSQ5T036 256 aa6.21□□□□□ -1.41
RIF1-206ENST00000453091 TET1Q8NFU7 2136 aa6.21□□□□□ -1.42
RIF1-206ENST00000453091 TRAV8-3A0A0A6YYJ7 113 aa6.21□□□□□ -1.42
RIF1-206ENST00000453091 MRPL51Q4U2R6 128 aaKnown RBP6.21□□□□□ -1.42
RIF1-206ENST00000453091 RNASE13Q5GAN3 156 aaKnown RBP6.21□□□□□ -1.42
RIF1-206ENST00000453091 C15orf65H3BRN8 121 aa6.21□□□□□ -1.42
RIF1-206ENST00000453091 SPOCK3Q9BQ16 436 aa6.21□□□□□ -1.42
RIF1-206ENST00000453091 H3BUX3 64 aa6.21□□□□□ -1.42
RIF1-206ENST00000453091 SHANK2-AS3Q9BTD1 123 aa6.21□□□□□ -1.42
RIF1-206ENST00000453091 ERG28Q9UKR5 140 aa6.21□□□□□ -1.42
RIF1-206ENST00000453091 SLC25A16P16260 332 aa6.21□□□□□ -1.42
RIF1-206ENST00000453091 OR9G4Q8NGQ1 327 aa6.21□□□□□ -1.42
RIF1-206ENST00000453091 RITA1Q96K30 269 aa6.21□□□□□ -1.42
RIF1-206ENST00000453091 PDCD11Q14690 1871 aaKnown RBP6.2□□□□□ -1.42
RIF1-206ENST00000453091 IGHV3-38A0A0C4DH36 116 aa6.2□□□□□ -1.42
RIF1-206ENST00000453091 TMEM101Q96IK0 257 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms