RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 TET1Q8NFU7 2136 aa6.7□□□□□ -1.34
SMCO1-202ENST00000452776 PRRC2BQ5JSZ5 2229 aaKnown RBP6.7□□□□□ -1.34
SMCO1-202ENST00000452776 IGKV1OR2-108A0A075B7D4 117 aa6.7□□□□□ -1.34
SMCO1-202ENST00000452776 IGKV2D-26A0A0A0MRZ7 120 aa6.7□□□□□ -1.34
SMCO1-202ENST00000452776 TRAV3A0A0B4J244 114 aa6.7□□□□□ -1.34
SMCO1-202ENST00000452776 A0A1B0GX51 115 aa6.7□□□□□ -1.34
SMCO1-202ENST00000452776 UPK2O00526 184 aa6.7□□□□□ -1.34
SMCO1-202ENST00000452776 ARMS2P0C7Q2 107 aa6.7□□□□□ -1.34
SMCO1-202ENST00000452776 PYYP10082 97 aa6.7□□□□□ -1.34
SMCO1-202ENST00000452776 CXCL12P48061 93 aa6.7□□□□□ -1.34
SMCO1-202ENST00000452776 DIAPH2-AS1Q14236 149 aa6.7□□□□□ -1.34
SMCO1-202ENST00000452776 MORN3Q6PF18 240 aaPredicted RBP6.7□□□□□ -1.34
SMCO1-202ENST00000452776 OR13C6PQ8NH95 151 aa6.7□□□□□ -1.34
SMCO1-202ENST00000452776 TPPP3Q9BW30 176 aa6.7□□□□□ -1.34
SMCO1-202ENST00000452776 GNG12Q9UBI6 72 aa6.7□□□□□ -1.34
SMCO1-202ENST00000452776 KLF13Q9Y2Y9 288 aaPredicted RBP6.7□□□□□ -1.34
SMCO1-202ENST00000452776 IGKV3D-15A0A087WSY6 115 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 LOC107984156A0A0G2JMH3 177 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 ZNF785A8K8V0 405 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 MYOD1P15172 320 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 PPIFP30405 207 aaKnown RBP6.69□□□□□ -1.34
SMCO1-202ENST00000452776 GNG5P63218 68 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 MRPS21P82921 87 aaKnown RBP6.69□□□□□ -1.34
SMCO1-202ENST00000452776 FHL3Q13643 280 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 FAM159AQ6UWV7 190 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 LINC00305Q7Z4B0 112 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 Q86TA4 180 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 GTSCR1Q86UQ5 136 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 ARL17AQ8IVW1 177 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 LYPD1Q8N2G4 141 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 ZCCHC24Q8N2G6 241 aaKnown RBP6.69□□□□□ -1.34
SMCO1-202ENST00000452776 TMEM75Q8N9X5 138 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 AJUBAQ96IF1 538 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 TRAV8-2A0A0B4J237 113 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 C10orf142B7Z368 130 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 C15orf65H3BRN8 121 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 DUX1O43812 170 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 PSPNO60542 156 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 SCGB2A1O75556 95 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 ATP5G1P05496 136 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 RNASE2P10153 161 aaKnown RBP6.69□□□□□ -1.34
SMCO1-202ENST00000452776 HOXB4P17483 251 aaPredicted RBP6.69□□□□□ -1.34
SMCO1-202ENST00000452776 VEGFBP49765 207 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 MZT1Q08AG7 82 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 TMEM30BQ3MIR4 351 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 TMEM240Q5SV17 173 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 ZNF296Q8WUU4 475 aaPredicted RBP6.69□□□□□ -1.34
SMCO1-202ENST00000452776 TRGV9Q99603 122 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 IMUPQ9GZP8 106 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 TMEM14CQ9P0S9 112 aa6.69□□□□□ -1.34
SMCO1-202ENST00000452776 A0A0C4DFX4 3053 aa6.68□□□□□ -1.34
SMCO1-202ENST00000452776 TRAV12-1A0A0B4J245 112 aa6.68□□□□□ -1.34
SMCO1-202ENST00000452776 SMIM9A6NGZ8 99 aa6.68□□□□□ -1.34
SMCO1-202ENST00000452776 C16orf97H3BN30 126 aa6.68□□□□□ -1.34
SMCO1-202ENST00000452776 FSTL3O95633 263 aa6.68□□□□□ -1.34
SMCO1-202ENST00000452776 CFIP05156 583 aa6.68□□□□□ -1.34
SMCO1-202ENST00000452776 LEPP41159 167 aa6.68□□□□□ -1.34
SMCO1-202ENST00000452776 UBE2D1P51668 147 aa6.68□□□□□ -1.34
SMCO1-202ENST00000452776 FOXG1P55316 489 aaPredicted RBP6.68□□□□□ -1.34
SMCO1-202ENST00000452776 LOXL1Q08397 574 aaPredicted RBP6.68□□□□□ -1.34
SMCO1-202ENST00000452776 PATE2Q6UY27 113 aa6.68□□□□□ -1.34
SMCO1-202ENST00000452776 FAM90A1Q86YD7 464 aa6.68□□□□□ -1.34
SMCO1-202ENST00000452776 RASL10AQ92737 203 aa6.68□□□□□ -1.34
SMCO1-202ENST00000452776 Q9H3A6 140 aa6.68□□□□□ -1.34
SMCO1-202ENST00000452776 RNF186Q9NXI6 227 aa6.68□□□□□ -1.34
SMCO1-202ENST00000452776 EXPH5Q8NEV8 1989 aa6.68□□□□□ -1.34
SMCO1-202ENST00000452776 KIAA1549Q9HCM3 1950 aa6.68□□□□□ -1.34
SMCO1-202ENST00000452776 TNRC6BQ9UPQ9 1833 aaKnown RBP6.67□□□□□ -1.34
SMCO1-202ENST00000452776 J3KT08 172 aa6.67□□□□□ -1.34
SMCO1-202ENST00000452776 OVOL3O00110 214 aa6.67□□□□□ -1.34
SMCO1-202ENST00000452776 CXCL13O43927 109 aa6.67□□□□□ -1.34
SMCO1-202ENST00000452776 PROP1O75360 226 aa6.67□□□□□ -1.34
SMCO1-202ENST00000452776 DUSP14O95147 198 aaKnown RBP6.67□□□□□ -1.34
SMCO1-202ENST00000452776 SSR4P51571 173 aa6.67□□□□□ -1.34
SMCO1-202ENST00000452776 ATP5J2P56134 94 aa6.67□□□□□ -1.34
SMCO1-202ENST00000452776 PLGLAQ15195 96 aa6.67□□□□□ -1.34
SMCO1-202ENST00000452776 MRPL51Q4U2R6 128 aaKnown RBP6.67□□□□□ -1.34
SMCO1-202ENST00000452776 VKORC1L1Q8N0U8 176 aa6.67□□□□□ -1.34
SMCO1-202ENST00000452776 FOXC2Q99958 501 aa6.67□□□□□ -1.34
SMCO1-202ENST00000452776 FAM173AQ9BQD7 235 aa6.67□□□□□ -1.34
SMCO1-202ENST00000452776 PPDPFQ9H3Y8 114 aa6.67□□□□□ -1.34
SMCO1-202ENST00000452776 ARHGEF17Q96PE2 2063 aaPredicted RBP6.67□□□□□ -1.34
SMCO1-202ENST00000452776 TRAV8-4A0A0B4J246 113 aa6.66□□□□□ -1.34
SMCO1-202ENST00000452776 LINC01549A6NIU2 74 aa6.66□□□□□ -1.34
SMCO1-202ENST00000452776 H7C1H1 209 aa6.66□□□□□ -1.34
SMCO1-202ENST00000452776 MT-CO3P00414 261 aa6.66□□□□□ -1.34
SMCO1-202ENST00000452776 LGALS1P09382 135 aaKnown RBP6.66□□□□□ -1.34
SMCO1-202ENST00000452776 RPL13AP40429 203 aaKnown RBP6.66□□□□□ -1.34
SMCO1-202ENST00000452776 SRSF2Q01130 221 aaKnown RBP6.66□□□□□ -1.34
SMCO1-202ENST00000452776 SPRNQ5BIV9 151 aa6.66□□□□□ -1.34
SMCO1-202ENST00000452776 PRNTQ86SH4 94 aa6.66□□□□□ -1.34
SMCO1-202ENST00000452776 TUSC5Q8IXB3 177 aa6.66□□□□□ -1.34
SMCO1-202ENST00000452776 ANKRD29Q8N6D5 301 aa6.66□□□□□ -1.34
SMCO1-202ENST00000452776 OR13A1Q8NGR1 328 aa6.66□□□□□ -1.34
SMCO1-202ENST00000452776 TMEM160Q9NX00 188 aa6.66□□□□□ -1.34
SMCO1-202ENST00000452776 LRP4O75096 1905 aa6.66□□□□□ -1.34
SMCO1-202ENST00000452776 TRAV4A0A0B4J268 109 aa6.66□□□□□ -1.34
SMCO1-202ENST00000452776 DEFB108AA8MXU0 73 aa6.66□□□□□ -1.34
SMCO1-202ENST00000452776 IGHV4-34P06331 123 aa6.66□□□□□ -1.34
SMCO1-202ENST00000452776 LORP23490 312 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms