RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 LCN9Q8WX39 176 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 DIRC1Q969H9 104 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 RAB37Q96AX2 223 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 UPK3BQ9BT76 320 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 DPY30Q9C005 99 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 SLC35B3Q9H1N7 401 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 C16orf95Q9H693 158 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 LSM2Q9Y333 95 aaKnown RBP3□□□□□ -1.93
HMGB3P21-201ENST00000452483 AP4S1Q9Y587 144 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 ICOSQ9Y6W8 199 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 EML6Q6ZMW3 1958 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 TCF20Q9UGU0 1960 aaKnown RBP3□□□□□ -1.93
HMGB3P21-201ENST00000452483 TOPBP1Q92547 1522 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 SIPA1L1O43166 1804 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 A0A0B4J2C4 111 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 IGKV3D-20A0A0C4DH25 116 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 A0A0D9SG52 128 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 C3orf85A0A1B0GTC6 90 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 TCRBV3S1A0A5B6 114 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 H3BT86 120 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 OR1I1O60431 355 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 TCL1BO95988 128 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 TRACP01848 142 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 ZNF883P0CG24 379 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 CCL5P13501 91 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 PCBD1P61457 104 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 MRPS36P82909 103 aaKnown RBP2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 KLRD1Q13241 179 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 CDK5R1Q15078 307 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 IL17AQ16552 155 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 C9orf129Q5T035 196 aaKnown RBP2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 DPPA3Q6W0C5 159 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 FAM216BQ8N7L0 139 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 OR4X2Q8NGF9 303 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 CLDND2Q8NHS1 167 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 PKMYT1Q99640 499 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 VAMP8Q9BV40 100 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 ZNF355PQ9NSJ1 428 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 OR5V1Q9UGF6 321 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 U3KQK5 164 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 MYH6P13533 1939 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 NRKQ7Z2Y5 1582 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 ANKRD36BQ8N2N9 1353 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 OBSL1O75147 1896 aa2.99□□□□□ -1.93
HMGB3P21-201ENST00000452483 IGHV3-73A0A0B4J1V6 119 aa2.98□□□□□ -1.93
HMGB3P21-201ENST00000452483 SMIM31A0A1B0GVY4 71 aa2.98□□□□□ -1.93
HMGB3P21-201ENST00000452483 C19orf71A6NCJ1 209 aa2.98□□□□□ -1.93
HMGB3P21-201ENST00000452483 OR51F1A6NGY5 319 aa2.98□□□□□ -1.93
HMGB3P21-201ENST00000452483 CYSRT1A8MQ03 144 aa2.98□□□□□ -1.93
HMGB3P21-201ENST00000452483 CREBL2O60519 120 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P21-201ENST00000452483 YPEL1O60688 119 aa2.98□□□□□ -1.93
HMGB3P21-201ENST00000452483 CFC1P0CG37 223 aa2.98□□□□□ -1.93
HMGB3P21-201ENST00000452483 ZNF705BP0CI00 300 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P21-201ENST00000452483 FUSP35637 526 aaKnown RBP eCLIP2.98□□□□□ -1.93
HMGB3P21-201ENST00000452483 DYNLT1P63172 113 aa2.98□□□□□ -1.93
HMGB3P21-201ENST00000452483 C6orf52Q5T4I8 152 aa2.98□□□□□ -1.93
HMGB3P21-201ENST00000452483 SMCR5Q8TEV8 140 aa2.98□□□□□ -1.93
HMGB3P21-201ENST00000452483 LINC00526Q96FQ7 95 aa2.98□□□□□ -1.93
HMGB3P21-201ENST00000452483 SERP1Q9Y6X1 66 aa2.98□□□□□ -1.93
HMGB3P21-201ENST00000452483 ANKRD26Q9UPS8 1709 aa2.98□□□□□ -1.93
HMGB3P21-201ENST00000452483 HCFC1P51610 2035 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 MDFIC2A0A1B0GVS7 189 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 A0A1W2PRS3 328 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 MCRIP1C9JLW8 97 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 SDCBPO00560 298 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 LINC00032P0C843 101 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 BLCAPP62952 87 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 CIRBPQ14011 172 aaKnown RBP2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 Q6AWC8 147 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 SDIM1Q6ZPB5 146 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 C10orf111Q8N326 155 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 C3orf56Q8N813 242 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 PFN4Q8NHR9 129 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 TYMSOSQ8TAI1 123 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 AQP10Q96PS8 301 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 IMMP2LQ96T52 175 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 LINC00574Q9H8X3 128 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 KDM5AP29375 1690 aaKnown RBP2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 SVILO95425 2214 aa2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 TDRD6O60522 2096 aaKnown RBP2.97□□□□□ -1.93
HMGB3P21-201ENST00000452483 COL1A1P02452 1464 aaPredicted RBP2.96□□□□□ -1.93
HMGB3P21-201ENST00000452483 CFTRP13569 1480 aa2.96□□□□□ -1.93
HMGB3P21-201ENST00000452483 KIF13AQ9H1H9 1805 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 RRBP1Q9P2E9 1410 aaKnown RBP2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 LOC107986453A0A1B0GWG9 222 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 ZNF736B4DX44 427 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 TMEM262E9PQX1 116 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 TIMM17BO60830 172 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 ZNF432O94892 652 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 CD3DP04234 171 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 MSMBP08118 114 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 SLC25A4P12235 298 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 FABP4P15090 132 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 SUPT4H1P63272 117 aaKnown RBP2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 EBI3Q14213 229 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 UBE2SQ16763 222 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 C2orf83Q53S99 150 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms