RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 SAT2Q96F10 170 aaPredicted RBP11.14□□□□□ -0.63
TNF-208ENST00000449264 C2orf70A6NJV1 201 aa11.13□□□□□ -0.63
TNF-208ENST00000449264 OVOL1O14753 267 aa11.13□□□□□ -0.63
TNF-208ENST00000449264 BUB3O43684 328 aa11.13□□□□□ -0.63
TNF-208ENST00000449264 SNRPCP09234 159 aaKnown RBP11.13□□□□□ -0.63
TNF-208ENST00000449264 STAG3L2P0CL84 134 aa11.13□□□□□ -0.63
TNF-208ENST00000449264 STAG3L3P0CL85 134 aa11.13□□□□□ -0.63
TNF-208ENST00000449264 PYYP10082 97 aa11.13□□□□□ -0.63
TNF-208ENST00000449264 SHISA2Q6UWI4 295 aa11.13□□□□□ -0.63
TNF-208ENST00000449264 OR8I2Q8N0Y5 310 aa11.13□□□□□ -0.63
TNF-208ENST00000449264 FAM167A-AS1Q96KT0 104 aa11.13□□□□□ -0.63
TNF-208ENST00000449264 ELOVL1Q9BW60 279 aa11.13□□□□□ -0.63
TNF-208ENST00000449264 RHPN1-AS1Q9BWJ2 59 aa11.13□□□□□ -0.63
TNF-208ENST00000449264 HRH4Q9H3N8 390 aa11.13□□□□□ -0.63
TNF-208ENST00000449264 A0A1W2PS18 150 aa11.12□□□□□ -0.63
TNF-208ENST00000449264 OR10J4P0C629 311 aa11.12□□□□□ -0.63
TNF-208ENST00000449264 SMPXQ9UHP9 88 aa11.12□□□□□ -0.63
TNF-208ENST00000449264 U3KQE9 123 aa11.12□□□□□ -0.63
TNF-208ENST00000449264 CXorf1O96002 111 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 FOLR2P14207 255 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 UBE2L3P68036 154 aaKnown RBP11.11□□□□□ -0.63
TNF-208ENST00000449264 IL34Q6ZMJ4 242 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 BPIFA4PQ86YQ2 179 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 MBD3L1Q8WWY6 194 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 ZNF503Q96F45 646 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 GRAMD2BQ96HH9 432 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 MDFIQ99750 246 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 PAXXQ9BUH6 204 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 TMPRSS5Q9H3S3 457 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 TRRAPQ9Y4A5 3859 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 TEX46H3BTG2 121 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 M0QZ24 198 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 CHEK1O14757 476 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 HBE1P02100 147 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 GP9P14770 177 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 RPL7P18124 248 aaKnown RBP11.11□□□□□ -0.63
TNF-208ENST00000449264 CBLN1P23435 193 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 BMI1P35226 326 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 C16orf54Q6UWD8 224 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 PQLC2Q6ZP29 291 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 LINC00482Q8N8I6 264 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 OR51M1Q9H341 326 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 TMEM231Q9H6L2 316 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 RNF24Q9Y225 148 aa11.11□□□□□ -0.63
TNF-208ENST00000449264 H3BTX0 84 aa11.1□□□□□ -0.63
TNF-208ENST00000449264 GCHFRP30047 84 aa11.1□□□□□ -0.63
TNF-208ENST00000449264 RIPPLY3P57055 190 aa11.1□□□□□ -0.63
TNF-208ENST00000449264 CLLU1Q5K131 121 aa11.1□□□□□ -0.63
TNF-208ENST00000449264 ADAMTSL5Q6ZMM2 481 aa11.1□□□□□ -0.63
TNF-208ENST00000449264 STXBP6Q8NFX7 210 aa11.1□□□□□ -0.63
TNF-208ENST00000449264 DYNLRB2Q8TF09 96 aa11.1□□□□□ -0.63
TNF-208ENST00000449264 GLMPQ8WWB7 406 aa11.1□□□□□ -0.63
TNF-208ENST00000449264 MARC2Q969Z3 335 aa11.1□□□□□ -0.63
TNF-208ENST00000449264 IGKV3-7A0A075B6H7 116 aa11.09□□□□□ -0.63
TNF-208ENST00000449264 CSN3P07498 182 aa11.09□□□□□ -0.63
TNF-208ENST00000449264 ATF4P18848 351 aaPredicted RBP11.09□□□□□ -0.63
TNF-208ENST00000449264 RPL11P62913 178 aaKnown RBP11.09□□□□□ -0.63
TNF-208ENST00000449264 CCL20P78556 96 aa11.09□□□□□ -0.63
TNF-208ENST00000449264 C1orf194Q5T5A4 169 aa11.09□□□□□ -0.63
TNF-208ENST00000449264 SIGLEC15Q6ZMC9 328 aa11.09□□□□□ -0.63
TNF-208ENST00000449264 BLNKQ8WV28 456 aa11.09□□□□□ -0.63
TNF-208ENST00000449264 MLXQ9UH92 298 aa11.09□□□□□ -0.63
TNF-208ENST00000449264 ANK2Q01484 3957 aa11.09□□□□□ -0.63
TNF-208ENST00000449264 SAP30O75446 220 aa11.08□□□□□ -0.64
TNF-208ENST00000449264 GALR1P47211 349 aa11.08□□□□□ -0.64
TNF-208ENST00000449264 FXYD5Q96DB9 178 aa11.08□□□□□ -0.64
TNF-208ENST00000449264 GPR82Q96P67 336 aa11.08□□□□□ -0.64
TNF-208ENST00000449264 TMEM14CQ9P0S9 112 aa11.08□□□□□ -0.64
TNF-208ENST00000449264 NOTCH3Q9UM47 2321 aa11.08□□□□□ -0.64
TNF-208ENST00000449264 TRAV1-1A0A0B4J248 108 aa11.08□□□□□ -0.64
TNF-208ENST00000449264 MRPS12O15235 138 aaKnown RBP11.08□□□□□ -0.64
TNF-208ENST00000449264 TCF24Q7RTU0 167 aa11.08□□□□□ -0.64
TNF-208ENST00000449264 SPATA3Q8NHX4 192 aa11.08□□□□□ -0.64
TNF-208ENST00000449264 GNG13Q9P2W3 67 aa11.08□□□□□ -0.64
TNF-208ENST00000449264 ZNF785A8K8V0 405 aa11.07□□□□□ -0.64
TNF-208ENST00000449264 H3BQ15 152 aa11.07□□□□□ -0.64
TNF-208ENST00000449264 IGLC2P0DOY2 106 aa11.07□□□□□ -0.64
TNF-208ENST00000449264 UBE2G2P60604 165 aa11.07□□□□□ -0.64
TNF-208ENST00000449264 LYPD6BQ8NI32 183 aa11.07□□□□□ -0.64
TNF-208ENST00000449264 TMEM167BQ9NRX6 74 aa11.07□□□□□ -0.64
TNF-208ENST00000449264 ZNF586Q9NXT0 402 aa11.07□□□□□ -0.64
TNF-208ENST00000449264 SMAD5-AS1Q9Y6J3 95 aa11.07□□□□□ -0.64
TNF-208ENST00000449264 HELTA6NFD8 242 aa11.06□□□□□ -0.64
TNF-208ENST00000449264 HIST1H1EP10412 219 aaKnown RBP11.06□□□□□ -0.64
TNF-208ENST00000449264 C17orf77Q96MU5 243 aa11.06□□□□□ -0.64
TNF-208ENST00000449264 NBEAP1P0C6P0 100 aa11.05□□□□□ -0.64
TNF-208ENST00000449264 CD33P20138 364 aa11.05□□□□□ -0.64
TNF-208ENST00000449264 PSMB3P49720 205 aa11.05□□□□□ -0.64
TNF-208ENST00000449264 HAGHQ16775 308 aa11.05□□□□□ -0.64
TNF-208ENST00000449264 GBGT1Q8N5D6 347 aa11.05□□□□□ -0.64
TNF-208ENST00000449264 SLC17A3O00476 420 aa11.04□□□□□ -0.64
TNF-208ENST00000449264 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.04□□□□□ -0.64
TNF-208ENST00000449264 TRBV19A0A075B6N1 114 aa11.04□□□□□ -0.64
TNF-208ENST00000449264 IFNA1P01562 189 aa11.04□□□□□ -0.64
TNF-208ENST00000449264 TFPI2P48307 235 aa11.04□□□□□ -0.64
TNF-208ENST00000449264 CD300EQ496F6 205 aaPredicted RBP11.04□□□□□ -0.64
TNF-208ENST00000449264 RBPMS2Q6ZRY4 209 aaKnown RBP11.04□□□□□ -0.64
TNF-208ENST00000449264 TMEM61Q8N0U2 210 aa11.04□□□□□ -0.64
TNF-208ENST00000449264 NRN1Q9NPD7 142 aa11.04□□□□□ -0.64
TNF-208ENST00000449264 A0A087X0K7 114 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 370.2 ms