RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 SRSF12Q8WXF0 261 aaKnown RBP15.13■□□□□ 0.01
SDCBP-204ENST00000447182 SCNM1Q9BWG6 230 aa15.13■□□□□ 0.01
SDCBP-204ENST00000447182 TRBV19A0A075B6N1 114 aa15.13■□□□□ 0.01
SDCBP-204ENST00000447182 A0A1B0GW15 77 aa15.13■□□□□ 0.01
SDCBP-204ENST00000447182 hDV102S1A0JD36 115 aa15.13■□□□□ 0.01
SDCBP-204ENST00000447182 IGKV1-17P01599 117 aa15.13■□□□□ 0.01
SDCBP-204ENST00000447182 LYPD1Q8N2G4 141 aa15.13■□□□□ 0.01
SDCBP-204ENST00000447182 NEU4Q8WWR8 484 aaPredicted RBP15.13■□□□□ 0.01
SDCBP-204ENST00000447182 RNF5Q99942 180 aa15.13■□□□□ 0.01
SDCBP-204ENST00000447182 MS4A6AQ9H2W1 248 aa15.13■□□□□ 0.01
SDCBP-204ENST00000447182 NGBQ9NPG2 151 aa15.13■□□□□ 0.01
SDCBP-204ENST00000447182 RALYQ9UKM9 306 aaKnown RBP15.13■□□□□ 0.01
SDCBP-204ENST00000447182 K7EP13 123 aa15.12■□□□□ 0.01
SDCBP-204ENST00000447182 HLA-DRB1P01911 266 aa15.12■□□□□ 0.01
SDCBP-204ENST00000447182 HTR1DP28221 377 aa15.12■□□□□ 0.01
SDCBP-204ENST00000447182 RIGQ13278 110 aa15.12■□□□□ 0.01
SDCBP-204ENST00000447182 ZC2HC1AQ96GY0 325 aa15.12■□□□□ 0.01
SDCBP-204ENST00000447182 SHANK2-AS3Q9BTD1 123 aa15.12■□□□□ 0.01
SDCBP-204ENST00000447182 SCRT2Q9NQ03 307 aa15.12■□□□□ 0.01
SDCBP-204ENST00000447182 SHISA9B4DS77 424 aa15.11■□□□□ 0.01
SDCBP-204ENST00000447182 FBLN7Q53RD9 439 aa15.11■□□□□ 0.01
SDCBP-204ENST00000447182 MPV17L2Q567V2 206 aa15.11■□□□□ 0.01
SDCBP-204ENST00000447182 BPIFA4PQ86YQ2 179 aa15.11■□□□□ 0.01
SDCBP-204ENST00000447182 FBXL15Q9H469 300 aa15.11■□□□□ 0.01
SDCBP-204ENST00000447182 PKDREJQ9NTG1 2253 aa15.11■□□□□ 0.01
SDCBP-204ENST00000447182 E7EQL1 145 aa15.11■□□□□ 0.01
SDCBP-204ENST00000447182 H3BRN7 92 aa15.11■□□□□ 0.01
SDCBP-204ENST00000447182 LINC01545Q5VT33 79 aa15.11■□□□□ 0.01
SDCBP-204ENST00000447182 Q71RC1 249 aaPredicted RBP15.11■□□□□ 0.01
SDCBP-204ENST00000447182 TMUB1Q9BVT8 246 aa15.11■□□□□ 0.01
SDCBP-204ENST00000447182 ABCA1O95477 2261 aa15.11■□□□□ 0.01
SDCBP-204ENST00000447182 RBP4P02753 201 aa15.1■□□□□ 0.01
SDCBP-204ENST00000447182 ZNF138P52744 262 aa15.1■□□□□ 0.01
SDCBP-204ENST00000447182 SIGLEC15Q6ZMC9 328 aa15.1■□□□□ 0.01
SDCBP-204ENST00000447182 CEP250Q9BV73 2442 aa15.1■□□□□ 0.01
SDCBP-204ENST00000447182 K7EQM0 130 aa15.1■□□□□ 0.01
SDCBP-204ENST00000447182 ARMS2P0C7Q2 107 aa15.1■□□□□ 0.01
SDCBP-204ENST00000447182 BVES-AS1Q5T3Y7 98 aa15.1■□□□□ 0.01
SDCBP-204ENST00000447182 Q6AWC8 147 aa15.1■□□□□ 0.01
SDCBP-204ENST00000447182 TP73-AS1Q9UF72 201 aa15.1■□□□□ 0.01
SDCBP-204ENST00000447182 DLX1P56177 255 aa15.09■□□□□ 0.01
SDCBP-204ENST00000447182 C12orf54Q6X4T0 127 aa15.09■□□□□ 0.01
SDCBP-204ENST00000447182 AP5S1Q9NUS5 200 aa15.09■□□□□ 0.01
SDCBP-204ENST00000447182 LOC105371242A0A075B767 164 aa15.08■□□□□ 0.01
SDCBP-204ENST00000447182 K7EIM0 57 aa15.08■□□□□ 0.01
SDCBP-204ENST00000447182 PSG3Q16557 428 aa15.08■□□□□ 0.01
SDCBP-204ENST00000447182 ZGRF1Q86YA3 2104 aa15.08■□□□□ 0.01
SDCBP-204ENST00000447182 RPEQ96AT9 228 aa15.08■□□□□ 0.01
SDCBP-204ENST00000447182 PSG8Q9UQ74 426 aa15.08■□□□□ 0.01
SDCBP-204ENST00000447182 TRAV30A0A087WSZ9 112 aa15.08■□□□□ 0
SDCBP-204ENST00000447182 TOX4O94842 621 aa15.08■□□□□ 0
SDCBP-204ENST00000447182 NUDT3O95989 172 aa15.08■□□□□ 0
SDCBP-204ENST00000447182 RNASE8Q8TDE3 154 aaKnown RBP15.08■□□□□ 0
SDCBP-204ENST00000447182 LY6LH3BQJ8 138 aa15.07■□□□□ 0
SDCBP-204ENST00000447182 MRPS12O15235 138 aaKnown RBP15.07■□□□□ 0
SDCBP-204ENST00000447182 RHOGP84095 191 aa15.07■□□□□ 0
SDCBP-204ENST00000447182 DEFB125Q8N687 156 aa15.07■□□□□ 0
SDCBP-204ENST00000447182 C17orf77Q96MU5 243 aa15.07■□□□□ 0
SDCBP-204ENST00000447182 TAX1BP3O14907 124 aa15.07■□□□□ 0
SDCBP-204ENST00000447182 ZNF493Q6ZR52 646 aa15.07■□□□□ 0
SDCBP-204ENST00000447182 ZNF491Q8N8L2 437 aa15.07■□□□□ 0
SDCBP-204ENST00000447182 ZNF747Q9BV97 191 aa15.07■□□□□ 0
SDCBP-204ENST00000447182 CSN3P07498 182 aa15.06■□□□□ 0
SDCBP-204ENST00000447182 APOBEC3AP31941 199 aaPredicted RBP15.06■□□□□ 0
SDCBP-204ENST00000447182 CRIP1P50238 77 aa15.06■□□□□ 0
SDCBP-204ENST00000447182 RBX1P62877 108 aa15.06■□□□□ 0
SDCBP-204ENST00000447182 B9A039 149 aa15.05■□□□□ 0
SDCBP-204ENST00000447182 CSN1S1P47710 185 aa15.05■□□□□ 0
SDCBP-204ENST00000447182 PRB3Q04118 309 aaPredicted RBP15.05■□□□□ 0
SDCBP-204ENST00000447182 PLGLAQ15195 96 aa15.05■□□□□ 0
SDCBP-204ENST00000447182 RNF125Q96EQ8 232 aa15.05■□□□□ 0
SDCBP-204ENST00000447182 ZNF414Q96IQ9 312 aa15.05■□□□□ 0
SDCBP-204ENST00000447182 LAMA5O15230 3695 aa15.05■□□□□ 0
SDCBP-204ENST00000447182 MGAQ8IWI9 3026 aa15.05■□□□□ -0
SDCBP-204ENST00000447182 HIST1H1AQ02539 215 aaPredicted RBP15.05■□□□□ -0
SDCBP-204ENST00000447182 OR4C5Q8NGB2 326 aa15.05■□□□□ -0
SDCBP-204ENST00000447182 OR10AG1Q8NH19 301 aa15.05■□□□□ -0
SDCBP-204ENST00000447182 PPIAL4CA0A0B4J2A2 164 aa15.04■□□□□ -0
SDCBP-204ENST00000447182 PPIAL4GP0DN37 164 aa15.04■□□□□ -0
SDCBP-204ENST00000447182 RPS20P60866 119 aaKnown RBP15.04■□□□□ -0
SDCBP-204ENST00000447182 PDE6HQ13956 83 aa15.04■□□□□ -0
SDCBP-204ENST00000447182 VAMP3Q15836 100 aa15.04■□□□□ -0
SDCBP-204ENST00000447182 MAP1BP46821 2468 aaKnown RBP15.04■□□□□ -0
SDCBP-204ENST00000447182 PCNX1Q96RV3 2341 aa15.04■□□□□ -0
SDCBP-204ENST00000447182 WI2-2373I1.2A0A1W2PRP0 233 aa15.04■□□□□ -0
SDCBP-204ENST00000447182 KLK10O43240 276 aa15.04■□□□□ -0
SDCBP-204ENST00000447182 CNIH1O95406 144 aa15.04■□□□□ -0
SDCBP-204ENST00000447182 COX7A1P24310 79 aa15.04■□□□□ -0
SDCBP-204ENST00000447182 PCP4P48539 62 aa15.04■□□□□ -0
SDCBP-204ENST00000447182 FA2HQ7L5A8 372 aa15.04■□□□□ -0
SDCBP-204ENST00000447182 PMCHL2Q9BQD1 86 aa15.04■□□□□ -0
SDCBP-204ENST00000447182 SH3BGRL2Q9UJC5 107 aa15.04■□□□□ -0
SDCBP-204ENST00000447182 MUC21A0A0G2JKD1 596 aa15.03■□□□□ -0
SDCBP-204ENST00000447182 MUC21A0A140T8X8 626 aa15.03■□□□□ -0
SDCBP-204ENST00000447182 COX8AP10176 69 aa15.03■□□□□ -0
SDCBP-204ENST00000447182 MUC21Q5SSG8 566 aa15.03■□□□□ -0
SDCBP-204ENST00000447182 GFRALQ6UXV0 394 aa15.03■□□□□ -0
SDCBP-204ENST00000447182 PRSS3P2Q8NHM4 247 aa15.03■□□□□ -0
SDCBP-204ENST00000447182 MCRIP2Q9BUT9 160 aaKnown RBP15.03■□□□□ -0
SDCBP-204ENST00000447182 S100A7AQ86SG5 101 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms