RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 RALGAPA2Q2PPJ7 1873 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 LINC01545Q5VT33 79 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 DEFB109BQ30KR1 87 aa6.46□□□□□ -1.37
SMG1-202ENST00000446231 LYZL1Q6UWQ5 148 aa6.46□□□□□ -1.37
SMG1-202ENST00000446231 LCNL1Q6ZST4 164 aa6.46□□□□□ -1.37
SMG1-202ENST00000446231 SIGLEC8Q9NYZ4 499 aa6.46□□□□□ -1.37
SMG1-202ENST00000446231 SIT1Q9Y3P8 196 aa6.46□□□□□ -1.37
SMG1-202ENST00000446231 GFRA3O60609 400 aa6.46□□□□□ -1.37
SMG1-202ENST00000446231 ORMDL2Q53FV1 153 aa6.46□□□□□ -1.37
SMG1-202ENST00000446231 C16orf92Q96LL3 132 aa6.46□□□□□ -1.37
SMG1-202ENST00000446231 LYPD6Q86Y78 171 aa6.46□□□□□ -1.37
SMG1-202ENST00000446231 EXOC3-AS1Q8N2X6 119 aa6.46□□□□□ -1.37
SMG1-202ENST00000446231 KLF12Q9Y4X4 402 aa6.46□□□□□ -1.37
SMG1-202ENST00000446231 RNASE4P34096 147 aaKnown RBP6.46□□□□□ -1.37
SMG1-202ENST00000446231 FOXF2Q12947 444 aa6.46□□□□□ -1.37
SMG1-202ENST00000446231 ZC2HC1BQ5TFG8 222 aa6.46□□□□□ -1.37
SMG1-202ENST00000446231 NOTCH4Q99466 2003 aa6.46□□□□□ -1.37
SMG1-202ENST00000446231 TM4SF5O14894 197 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 CFHR2P36980 270 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 LINC00173Q6ZV60 143 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 ITLN1Q8WWA0 313 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 COL16A1Q07092 1604 aaPredicted RBP6.46□□□□□ -1.38
SMG1-202ENST00000446231 TRBV20-1A0A075B6N2 111 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 C2CD4DB7Z1M9 353 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 C12orf74Q32Q52 190 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 SIPA1L1O43166 1804 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 TNFRSF6BO95407 300 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 NCR2O95944 276 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 IGHV1-24A0A0C4DH33 117 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 MEIG1Q5JSS6 88 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 PLXNA1Q9UIW2 1896 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 CELA3BP08861 270 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 SMIM20Q8N5G0 67 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 COX6A1P12074 109 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 RHOGP84095 191 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 YAE1D1Q9NRH1 226 aa6.46□□□□□ -1.38
SMG1-202ENST00000446231 IGKV1-39P01597 117 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 IGKV1D-39P04432 117 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 C1orf53Q5VUE5 145 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 RFPL3SP0C7P2 107 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 SLC25A45Q8N413 288 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 NDUFS7O75251 213 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 CELA3AP09093 270 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 LOC285556D6RIA3 1793 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 GGTLC3B5MD39 225 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 SMKR1H3BMG3 65 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 ECSCRQ19T08 205 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 ZNRF1Q8ND25 227 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 SCRT2Q9NQ03 307 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 LOC102723996A0A087X1L8 192 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 SH2D6Q7Z4S9 175 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 CEND1Q8N111 149 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 TRAV12-3A0A0B4J271 114 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 VDAC2P45880 294 aaPredicted RBP6.45□□□□□ -1.38
SMG1-202ENST00000446231 LINC00473A8K010 186 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 C22orf46C9J442 243 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 ID1P41134 155 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 ASCL5Q7RTU5 278 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 FAM168AQ92567 244 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 ABHD17AQ96GS6 310 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 NPPCP23582 126 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 M0R381 172 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 AMN1Q8IY45 258 aa6.45□□□□□ -1.38
SMG1-202ENST00000446231 MYMXA0A1B0GTQ4 84 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 FNDC10F2Z333 226 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 SAA1P0DJI8 122 aaPredicted RBP6.44□□□□□ -1.38
SMG1-202ENST00000446231 C1RLQ9NZP8 487 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 IQCF6A8MYZ5 107 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 H3BMG7 143 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 HAX1O00165 279 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 ZNF688P0C7X2 276 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 SPANXDQ9BXN6 97 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 TTTY12Q9BZ98 90 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 CHD8Q9HCK8 2581 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 ASIPP42127 132 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 RAX2Q96IS3 184 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 THADAQ6YHU6 1953 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 FAM104BQ5XKR9 115 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 NPIPB6E9PJ23 425 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 APOBEC3AP31941 199 aaPredicted RBP6.44□□□□□ -1.38
SMG1-202ENST00000446231 CCDC144NLQ6NUI1 221 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 SPATA12Q7Z6I5 190 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 BOD1L2Q8IYS8 172 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 ZNF747Q9BV97 191 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 EDA2RQ9HAV5 297 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 CRXO43186 299 aaPredicted RBP6.44□□□□□ -1.38
SMG1-202ENST00000446231 CD24P25063 80 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 SVIPQ8NHG7 77 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 TMEM101Q96IK0 257 aa6.44□□□□□ -1.38
SMG1-202ENST00000446231 F2RL2O00254 374 aa6.43□□□□□ -1.38
SMG1-202ENST00000446231 DNAL4O96015 105 aa6.43□□□□□ -1.38
SMG1-202ENST00000446231 FRMD6-AS1P0C7T7 363 aa6.43□□□□□ -1.38
SMG1-202ENST00000446231 RNASE1P07998 156 aaKnown RBP6.43□□□□□ -1.38
SMG1-202ENST00000446231 TRGV8A0A0C4DH27 118 aa6.43□□□□□ -1.38
SMG1-202ENST00000446231 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.43□□□□□ -1.38
SMG1-202ENST00000446231 C19orf54Q5BKX5 351 aa6.43□□□□□ -1.38
SMG1-202ENST00000446231 PPP1R32Q7Z5V6 425 aa6.43□□□□□ -1.38
SMG1-202ENST00000446231 PSG7Q13046 419 aa6.43□□□□□ -1.38
SMG1-202ENST00000446231 RSPO1Q2MKA7 263 aaPredicted RBP6.43□□□□□ -1.38
SMG1-202ENST00000446231 C11orf1Q9H5F2 150 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 992.2 ms