RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 PRR3P79522 188 aaKnown RBP4.65□□□□□ -1.67
MCF2-206ENST00000446225 EGFEM1PQ0D2K5 195 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 Q499Y3 187 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 SLC25A26Q70HW3 274 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 LINC01551Q86U37 167 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 C11orf72Q8NBR9 251 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 OR2G3Q8NGZ4 309 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 BLNKQ8WV28 456 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 ARL11Q969Q4 196 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 TMEM106AQ96A25 262 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 BORCS8Q96FH0 119 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 FMC1Q96HJ9 113 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 MGLLQ99685 303 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 NRIP2Q9BQI9 281 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 OR51E2Q9H255 320 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 SLC25A22Q9H936 323 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 SSR3Q9UNL2 185 aa4.65□□□□□ -1.67
MCF2-206ENST00000446225 ANK3Q12955 4377 aaKnown RBP4.65□□□□□ -1.67
MCF2-206ENST00000446225 IGKV1-12A0A0C4DH73 117 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 A0A0X1KG70 313 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 B4DSR2 109 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 M0R143 59 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 ANGPTL7O43827 346 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 GNG7O60262 68 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 MRPS14O60783 128 aaKnown RBP4.64□□□□□ -1.67
MCF2-206ENST00000446225 IGKV1D-12P01611 117 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 CD2P06729 351 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 MSMBP08118 114 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 COX7A1P24310 79 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 RPS25P62851 125 aaKnown RBP4.64□□□□□ -1.67
MCF2-206ENST00000446225 ZNF773Q6PK81 442 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 ACP7Q6ZNF0 438 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 FAM71E2Q8N5Q1 922 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 SLC35G3Q8N808 338 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 OR11H6Q8NGC7 330 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 OR4M1Q8NGD0 313 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 DERL3Q96Q80 235 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 EDA2RQ9HAV5 297 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 CCL28Q9NRJ3 127 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 ZNF230Q9UIE0 474 aaPredicted RBP4.64□□□□□ -1.67
MCF2-206ENST00000446225 ERG28Q9UKR5 140 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 IGKV1D-17A0A075B6S4 117 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 FAM236DA0A1B0GTK5 79 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 CORTO00230 105 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 AMBPP02760 352 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 IGKV2-30P06310 120 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 FAM236CP0DP71 79 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 PSG2P11465 335 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 ORM2P19652 201 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 CXCL2P19875 107 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 NPY1RP25929 384 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 GABRA2P47869 451 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 EMP1P54849 157 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 KISS1Q15726 138 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 SSX1Q16384 188 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 RSBN1Q5VWQ0 802 aaPredicted RBP4.64□□□□□ -1.67
MCF2-206ENST00000446225 ZNF343Q6P1L6 599 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 TMEM91Q6ZNR0 172 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 CD177Q8N6Q3 437 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 FAM216BQ8N7L0 139 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 OR8B3Q8NGG8 313 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 OR5A1Q8NGJ0 315 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 DCUN1D4Q92564 292 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 RNF185Q96GF1 192 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 GAFA1Q96PS6 74 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 OR8B2Q96RD0 313 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 SULT4A1Q9BR01 284 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 PBDC1Q9BVG4 233 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 HES4Q9HCC6 221 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 SDF2L1Q9HCN8 221 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 RSL24D1Q9UHA3 163 aaKnown RBP4.64□□□□□ -1.67
MCF2-206ENST00000446225 TANC2Q9HCD6 1990 aa4.64□□□□□ -1.67
MCF2-206ENST00000446225 ABCA2Q9BZC7 2435 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 SETD2Q9BYW2 2564 aaPredicted RBP4.63□□□□□ -1.67
MCF2-206ENST00000446225 IGLV8-61A0A075B6I0 122 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 IGHV3OR16-9A0A0B4J2B5 98 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 hADV38S2A0JD32 116 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 MAS1P04201 325 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 TAS2R30P59541 319 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 GNB2P62879 340 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 FABP5Q01469 135 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 GSG1LQ6UXU4 331 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 MOB1BQ7L9L4 216 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 MKXQ8IYA7 352 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 LYG1Q8N1E2 194 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 OR11H7Q8NGC8 314 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 ORAOV1Q8WV07 137 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 MBD3L1Q8WWY6 194 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 LITAFQ99732 161 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 C19orf24Q9BVV8 132 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 RBFOX1Q9NWB1 397 aaKnown RBP4.63□□□□□ -1.67
MCF2-206ENST00000446225 KAAG1Q9UBP8 84 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 CKLFQ9UBR5 152 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 ZNF222Q9UK12 451 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 MALRD1Q5VYJ5 2156 aa4.63□□□□□ -1.67
MCF2-206ENST00000446225 SONP18583 2426 aaKnown RBP4.63□□□□□ -1.67
MCF2-206ENST00000446225 HIVEP2P31629 2446 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 ARHGAP32A7KAX9 2087 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 ZNF207O43670 478 aaKnown RBP4.62□□□□□ -1.67
MCF2-206ENST00000446225 NDUFB3O43676 98 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms