RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 M0R129 80 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 IGKV1-39P01597 117 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 IGKV1D-39P04432 117 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 ARPP19P56211 112 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 GABARAPL2P60520 117 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 HERVK_113P61574 105 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 HBBP68871 147 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 LY6G5CQ5SRR4 150 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 ZC2HC1BQ5TFG8 222 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 LAIR2Q6ISS4 152 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.83□□□□□ -1.96
UBR3-206ENST00000444475 ZFP62Q8NB50 900 aaPredicted RBP2.83□□□□□ -1.96
UBR3-206ENST00000444475 C2orf15Q8WU43 125 aaKnown RBP2.83□□□□□ -1.96
UBR3-206ENST00000444475 POP5Q969H6 163 aaKnown RBP2.83□□□□□ -1.96
UBR3-206ENST00000444475 ANAPC1Q9H1A4 1944 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 IGLV3-10A0A075B6K4 115 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 A0A087WW49 117 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 SRP19P09132 144 aaKnown RBP2.83□□□□□ -1.96
UBR3-206ENST00000444475 ZNF705DP0CH99 300 aaPredicted RBP2.83□□□□□ -1.96
UBR3-206ENST00000444475 HLA-DMBP28068 263 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 ATP5G2Q06055 141 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 GTSCR1Q86UQ5 136 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 OR10P1Q8NGE3 313 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 OR4B1Q8NGF8 309 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 OR5H2Q8NGV7 314 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 WFDC5Q8TCV5 224 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 TIMM17AQ99595 171 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 CHAC1Q9BUX1 264 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 SLC25A2Q9BXI2 301 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 C6orf106Q9H6K1 298 aaPredicted RBP2.83□□□□□ -1.96
UBR3-206ENST00000444475 SLC25A22Q9H936 323 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 LSM2Q9Y333 95 aaKnown RBP2.83□□□□□ -1.96
UBR3-206ENST00000444475 NUP98P52948 1817 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 OBSL1O75147 1896 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 HELZP42694 1942 aaKnown RBP2.83□□□□□ -1.96
UBR3-206ENST00000444475 ADAMTS20P59510 1910 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 MCM3APO60318 1980 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 IGHV3OR16-10A0A075B7F0 116 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 IGHV3-72A0A0B4J1Y9 119 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 A0A0D9SG52 128 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 LORP23490 312 aaPredicted RBP2.83□□□□□ -1.96
UBR3-206ENST00000444475 HIST1H2BOP23527 126 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 HIST1H2BBP33778 126 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 HIST1H2BDP58876 126 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 HIST1H2BCP62807 126 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 HIST2H2BEQ16778 126 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.83□□□□□ -1.96
UBR3-206ENST00000444475 MORN3Q6PF18 240 aaPredicted RBP2.83□□□□□ -1.96
UBR3-206ENST00000444475 HIST1H2BHQ93079 126 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 HIST1H2BNQ99877 126 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 HIST1H2BMQ99879 126 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 GINS4Q9BRT9 223 aa2.83□□□□□ -1.96
UBR3-206ENST00000444475 IGHV3OR15-7A0A075B7D8 119 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 C19orf84I3L1E1 186 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 UBL3O95164 117 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 SCGB1C2P0DMR2 95 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 FABP2P12104 132 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 ADCYAP1P18509 176 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 DEFA5Q01523 94 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 AKR1C1Q04828 323 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 IGFL3Q6UXB1 125 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 C10orf126Q8N4M7 172 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 TMEM252Q8N6L7 170 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 SCGB1C1Q8TD33 95 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 DIRC1Q969H9 104 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 OPRPNQ99935 248 aaPredicted RBP2.82□□□□□ -1.96
UBR3-206ENST00000444475 SLC35B3Q9H1N7 401 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 CKLFQ9UBR5 152 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 DSCAML1Q8TD84 2053 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 MYLKQ15746 1914 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 PTPRBP23467 1997 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 TRGV5A0A0B4J1U4 118 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 C3orf85A0A1B0GTC6 90 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 ZNF705GA8MUZ8 300 aaPredicted RBP2.82□□□□□ -1.96
UBR3-206ENST00000444475 NDUFB6O95139 128 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 IGLV2-23P01705 113 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 CCL4P13236 92 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 SNCAP37840 140 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 CYCSP99999 105 aaKnown RBP2.82□□□□□ -1.96
UBR3-206ENST00000444475 PSMF1Q92530 271 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 AQP10Q96PS8 301 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 SERP1Q9Y6X1 66 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 TRBV20-1A0A075B6N2 111 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 PINLYPA6NC86 204 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 NDUFB3O43676 98 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 MT-ND6P03923 174 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 IGKV1-16P04430 117 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 SLC25A6P12236 298 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 SNRPD3P62318 126 aaKnown RBP2.82□□□□□ -1.96
UBR3-206ENST00000444475 ARPINQ7Z6K5 226 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 BPIFB6Q8NFQ5 453 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 C7orf33Q8WU49 177 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 DOCK8Q8NF50 2099 aa2.82□□□□□ -1.96
UBR3-206ENST00000444475 DDX60Q8IY21 1712 aaKnown RBP2.82□□□□□ -1.96
UBR3-206ENST00000444475 POLR2AP24928 1970 aaKnown RBP2.81□□□□□ -1.96
UBR3-206ENST00000444475 KRTAP16-1A8MUX0 517 aa2.81□□□□□ -1.96
UBR3-206ENST00000444475 ZNF324O75467 553 aaPredicted RBP2.81□□□□□ -1.96
UBR3-206ENST00000444475 LINC00032P0C843 101 aa2.81□□□□□ -1.96
UBR3-206ENST00000444475 SRP14P37108 136 aaKnown RBP2.81□□□□□ -1.96
UBR3-206ENST00000444475 CXCL5P42830 114 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms