RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 GPR82Q96P67 336 aa9.47□□□□□ -0.89
SMPD4-209ENST00000439886 CYSLTR1Q9Y271 337 aa9.47□□□□□ -0.89
SMPD4-209ENST00000439886 SPTBN1Q01082 2364 aaKnown RBP9.47□□□□□ -0.89
SMPD4-209ENST00000439886 C21orf140B9A014 251 aa9.46□□□□□ -0.89
SMPD4-209ENST00000439886 RABAC1Q9UI14 185 aa9.46□□□□□ -0.89
SMPD4-209ENST00000439886 ZNF257Q9Y2Q1 563 aa9.46□□□□□ -0.89
SMPD4-209ENST00000439886 SIT1Q9Y3P8 196 aa9.46□□□□□ -0.89
SMPD4-209ENST00000439886 A1L4Q6 167 aa9.46□□□□□ -0.9
SMPD4-209ENST00000439886 M0R1B8 84 aa9.46□□□□□ -0.9
SMPD4-209ENST00000439886 NCR2O95944 276 aa9.46□□□□□ -0.9
SMPD4-209ENST00000439886 SEC11AP67812 179 aa9.46□□□□□ -0.9
SMPD4-209ENST00000439886 PPDPFQ9H3Y8 114 aa9.46□□□□□ -0.9
SMPD4-209ENST00000439886 TRGV8A0A0C4DH27 118 aa9.46□□□□□ -0.9
SMPD4-209ENST00000439886 TGFAP01135 160 aa9.46□□□□□ -0.9
SMPD4-209ENST00000439886 CECR9P0C854 216 aa9.46□□□□□ -0.9
SMPD4-209ENST00000439886 ITLN1Q8WWA0 313 aa9.46□□□□□ -0.9
SMPD4-209ENST00000439886 PIMREGQ9BSJ6 248 aa9.46□□□□□ -0.9
SMPD4-209ENST00000439886 TMEM14BQ9NUH8 114 aa9.46□□□□□ -0.9
SMPD4-209ENST00000439886 AKAP6Q13023 2319 aa9.46□□□□□ -0.9
SMPD4-209ENST00000439886 UPK2O00526 184 aa9.45□□□□□ -0.9
SMPD4-209ENST00000439886 RBPMS2Q6ZRY4 209 aaKnown RBP9.45□□□□□ -0.9
SMPD4-209ENST00000439886 EXOC3-AS1Q8N2X6 119 aa9.45□□□□□ -0.9
SMPD4-209ENST00000439886 SPAG8Q99932 426 aaPredicted RBP9.45□□□□□ -0.9
SMPD4-209ENST00000439886 SCRT2Q9NQ03 307 aa9.45□□□□□ -0.9
SMPD4-209ENST00000439886 FOXA2Q9Y261 457 aaPredicted RBP9.45□□□□□ -0.9
SMPD4-209ENST00000439886 C19orf67A6NJJ6 358 aa9.45□□□□□ -0.9
SMPD4-209ENST00000439886 DLL1O00548 723 aa9.45□□□□□ -0.9
SMPD4-209ENST00000439886 PRCDQ00LT1 54 aa9.45□□□□□ -0.9
SMPD4-209ENST00000439886 WFDC2Q14508 124 aa9.45□□□□□ -0.9
SMPD4-209ENST00000439886 SPRNQ5BIV9 151 aa9.45□□□□□ -0.9
SMPD4-209ENST00000439886 C8orf86Q6ZUL3 223 aa9.45□□□□□ -0.9
SMPD4-209ENST00000439886 FAM216BQ8N7L0 139 aa9.45□□□□□ -0.9
SMPD4-209ENST00000439886 OR1L8Q8NGR8 309 aa9.45□□□□□ -0.9
SMPD4-209ENST00000439886 GTSF1Q8WW33 167 aa9.45□□□□□ -0.9
SMPD4-209ENST00000439886 TNRC18O15417 2968 aaPredicted RBP9.45□□□□□ -0.9
SMPD4-209ENST00000439886 FAM90A27PA6NNH2 459 aa9.44□□□□□ -0.9
SMPD4-209ENST00000439886 RBP4P02753 201 aa9.44□□□□□ -0.9
SMPD4-209ENST00000439886 RNASE2P10153 161 aaKnown RBP9.44□□□□□ -0.9
SMPD4-209ENST00000439886 SPATA25Q9BR10 227 aa9.44□□□□□ -0.9
SMPD4-209ENST00000439886 A0A1W2PPM0 123 aa9.44□□□□□ -0.9
SMPD4-209ENST00000439886 KLF5Q13887 457 aaPredicted RBP9.44□□□□□ -0.9
SMPD4-209ENST00000439886 ARPC1AQ92747 370 aa9.44□□□□□ -0.9
SMPD4-209ENST00000439886 CHCHD1Q96BP2 118 aaKnown RBP9.44□□□□□ -0.9
SMPD4-209ENST00000439886 MBD6Q96DN6 1003 aa9.44□□□□□ -0.9
SMPD4-209ENST00000439886 MRPL32Q9BYC8 188 aaKnown RBP9.44□□□□□ -0.9
SMPD4-209ENST00000439886 DCHS1Q96JQ0 3298 aa9.44□□□□□ -0.9
SMPD4-209ENST00000439886 ARMS2P0C7Q2 107 aa9.44□□□□□ -0.9
SMPD4-209ENST00000439886 IFI27P40305 119 aaPredicted RBP9.44□□□□□ -0.9
SMPD4-209ENST00000439886 SUB1P53999 127 aaKnown RBP eCLIP9.44□□□□□ -0.99e-7■■■□□ 17.7
SMPD4-209ENST00000439886 C5orf47Q569G3 176 aa9.44□□□□□ -0.9
SMPD4-209ENST00000439886 TIMM23BQ5SRD1 257 aa9.44□□□□□ -0.9
SMPD4-209ENST00000439886 FAM167A-AS1Q96KT0 104 aa9.44□□□□□ -0.9
SMPD4-209ENST00000439886 TMEM265A0A087WTH1 108 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 H3BRM9 83 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 MT-ATP8P03928 68 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 FAM106CPP0CH98 169 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 FAM106AQ4KMX7 169 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 RNFT1Q5M7Z0 435 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 C20orf78Q9BR46 151 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 MRPL20Q9BYC9 149 aaKnown RBP9.43□□□□□ -0.9
SMPD4-209ENST00000439886 TTTY13Q9BZ97 58 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 Q9H3A6 140 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 NBASA2RRP1 2371 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 ASPMQ8IZT6 3477 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 LOXL3P58215 753 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 SAMD5Q5TGI4 173 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 RASL11AQ6T310 242 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 SYT8Q8NBV8 401 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 SPRR3Q9UBC9 169 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 TRBV20-1A0A075B6N2 111 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 E7EUB6 86 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 PRSS1P07477 247 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 COX8AP10176 69 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 GCSAMQ8N6F7 178 aa9.43□□□□□ -0.9
SMPD4-209ENST00000439886 C1orf162Q8NEQ5 155 aaPredicted RBP9.43□□□□□ -0.9
SMPD4-209ENST00000439886 DSCAML1Q8TD84 2053 aa9.42□□□□□ -0.9
SMPD4-209ENST00000439886 FAM90A9PA6NNJ1 464 aa9.42□□□□□ -0.9
SMPD4-209ENST00000439886 SMKR1H3BMG3 65 aa9.42□□□□□ -0.9
SMPD4-209ENST00000439886 OR2J3O76001 311 aa9.42□□□□□ -0.9
SMPD4-209ENST00000439886 PRTN3P24158 256 aa9.42□□□□□ -0.9
SMPD4-209ENST00000439886 PATE2Q6UY27 113 aa9.42□□□□□ -0.9
SMPD4-209ENST00000439886 Q71RC1 249 aaPredicted RBP9.42□□□□□ -0.9
SMPD4-209ENST00000439886 PCP2Q8IVA1 136 aa9.42□□□□□ -0.9
SMPD4-209ENST00000439886 CITED2Q99967 270 aaPredicted RBP9.42□□□□□ -0.9
SMPD4-209ENST00000439886 MRPL36Q9P0J6 103 aaKnown RBP9.42□□□□□ -0.9
SMPD4-209ENST00000439886 VPREB3Q9UKI3 123 aa9.42□□□□□ -0.9
SMPD4-209ENST00000439886 S4R3C0 116 aa9.42□□□□□ -0.9
SMPD4-209ENST00000439886 A0A1B0GUT8 65 aa9.42□□□□□ -0.9
SMPD4-209ENST00000439886 K7ERJ3 54 aa9.42□□□□□ -0.9
SMPD4-209ENST00000439886 CT45A6P0DMU7 189 aa9.42□□□□□ -0.9
SMPD4-209ENST00000439886 CT45A5P0DMU8 189 aa9.42□□□□□ -0.9
SMPD4-209ENST00000439886 CT45A7P0DMV0 189 aa9.42□□□□□ -0.9
SMPD4-209ENST00000439886 CCL3L1P16619 93 aa9.42□□□□□ -0.9
SMPD4-209ENST00000439886 ZCCHC24Q8N2G6 241 aaKnown RBP9.42□□□□□ -0.9
SMPD4-209ENST00000439886 WIPF2Q8TF74 440 aaPredicted RBP9.42□□□□□ -0.9
SMPD4-209ENST00000439886 MS4A6AQ9H2W1 248 aa9.42□□□□□ -0.9
SMPD4-209ENST00000439886 INSL3P51460 131 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 RIGQ13278 110 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 PLGLAQ15195 96 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 FAM120AOSQ5T036 256 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms