RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 PQLC2Q6ZP29 291 aa15.76■□□□□ 0.11
CHD3-204ENST00000439235 SSX7Q7RTT5 188 aa15.76■□□□□ 0.11
CHD3-204ENST00000439235 GPR82Q96P67 336 aa15.76■□□□□ 0.11
CHD3-204ENST00000439235 SLC25A2Q9BXI2 301 aa15.76■□□□□ 0.11
CHD3-204ENST00000439235 IGHV3-49A0A0A0MS15 119 aa15.75■□□□□ 0.11
CHD3-204ENST00000439235 TRAV5A0A0B4J249 113 aa15.75■□□□□ 0.11
CHD3-204ENST00000439235 HMGB3O15347 200 aaKnown RBP15.75■□□□□ 0.11
CHD3-204ENST00000439235 OR7C2O60412 319 aa15.75■□□□□ 0.11
CHD3-204ENST00000439235 CXorf1O96002 111 aa15.75■□□□□ 0.11
CHD3-204ENST00000439235 RPL7P18124 248 aaKnown RBP15.75■□□□□ 0.11
CHD3-204ENST00000439235 LEMD1Q68G75 181 aa15.75■□□□□ 0.11
CHD3-204ENST00000439235 BPIFA4PQ86YQ2 179 aa15.75■□□□□ 0.11
CHD3-204ENST00000439235 OR8I2Q8N0Y5 310 aa15.75■□□□□ 0.11
CHD3-204ENST00000439235 SFT2D1Q8WV19 159 aa15.75■□□□□ 0.11
CHD3-204ENST00000439235 ELOVL1Q9BW60 279 aa15.75■□□□□ 0.11
CHD3-204ENST00000439235 RHPN1-AS1Q9BWJ2 59 aa15.75■□□□□ 0.11
CHD3-204ENST00000439235 COL6A5A8TX70 2615 aa15.75■□□□□ 0.11
CHD3-204ENST00000439235 IGHV3OR16-13A0A075B7E8 117 aa15.74■□□□□ 0.11
CHD3-204ENST00000439235 IGHV3-74A0A0B4J1X5 117 aa15.74■□□□□ 0.11
CHD3-204ENST00000439235 APOHP02749 345 aaPredicted RBP15.74■□□□□ 0.11
CHD3-204ENST00000439235 CBLN1P23435 193 aa15.74■□□□□ 0.11
CHD3-204ENST00000439235 C16orf54Q6UWD8 224 aa15.74■□□□□ 0.11
CHD3-204ENST00000439235 LINC00482Q8N8I6 264 aa15.74■□□□□ 0.11
CHD3-204ENST00000439235 FAM167A-AS1Q96KT0 104 aa15.74■□□□□ 0.11
CHD3-204ENST00000439235 TMEM14CQ9P0S9 112 aa15.74■□□□□ 0.11
CHD3-204ENST00000439235 FBN1P35555 2871 aaKnown RBP15.73■□□□□ 0.11
CHD3-204ENST00000439235 TRAV1-1A0A0B4J248 108 aa15.73■□□□□ 0.11
CHD3-204ENST00000439235 IGHV3-66A0A0C4DH42 116 aa15.73■□□□□ 0.11
CHD3-204ENST00000439235 CHEK1O14757 476 aa15.73■□□□□ 0.11
CHD3-204ENST00000439235 EIF3GO75821 320 aaKnown RBP eCLIP15.73■□□□□ 0.11
CHD3-204ENST00000439235 NMBP08949 121 aa15.73■□□□□ 0.11
CHD3-204ENST00000439235 ARL14EPLP0DKL9 152 aa15.73■□□□□ 0.11
CHD3-204ENST00000439235 FOLR2P14207 255 aa15.73■□□□□ 0.11
CHD3-204ENST00000439235 PAXXQ9BUH6 204 aa15.73■□□□□ 0.11
CHD3-204ENST00000439235 OR51M1Q9H341 326 aa15.73■□□□□ 0.11
CHD3-204ENST00000439235 CSN3P07498 182 aa15.72■□□□□ 0.11
CHD3-204ENST00000439235 GP9P14770 177 aa15.72■□□□□ 0.11
CHD3-204ENST00000439235 GALR1P47211 349 aa15.72■□□□□ 0.11
CHD3-204ENST00000439235 FGF8P55075 233 aaPredicted RBP15.72■□□□□ 0.11
CHD3-204ENST00000439235 CLLU1Q5K131 121 aa15.72■□□□□ 0.11
CHD3-204ENST00000439235 IL34Q6ZMJ4 242 aa15.72■□□□□ 0.11
CHD3-204ENST00000439235 IQCF2Q8IXL9 164 aa15.72■□□□□ 0.11
CHD3-204ENST00000439235 GLMPQ8WWB7 406 aa15.72■□□□□ 0.11
CHD3-204ENST00000439235 SIGLEC8Q9NYZ4 499 aa15.72■□□□□ 0.11
CHD3-204ENST00000439235 HELTA6NFD8 242 aa15.71■□□□□ 0.11
CHD3-204ENST00000439235 EDN2P20800 178 aa15.71■□□□□ 0.11
CHD3-204ENST00000439235 GCHFRP30047 84 aa15.71■□□□□ 0.11
CHD3-204ENST00000439235 UBE2L3P68036 154 aaKnown RBP15.71■□□□□ 0.11
CHD3-204ENST00000439235 DYNLRB2Q8TF09 96 aa15.71■□□□□ 0.11
CHD3-204ENST00000439235 STAB1Q9NY15 2570 aa15.71■□□□□ 0.1
CHD3-204ENST00000439235 ATRQ13535 2644 aa15.7■□□□□ 0.1
CHD3-204ENST00000439235 A0A1B0GV50 99 aa15.7■□□□□ 0.1
CHD3-204ENST00000439235 CD5P06127 495 aa15.7■□□□□ 0.1
CHD3-204ENST00000439235 ATF4P18848 351 aaPredicted RBP15.7■□□□□ 0.1
CHD3-204ENST00000439235 SIGLEC15Q6ZMC9 328 aa15.7■□□□□ 0.1
CHD3-204ENST00000439235 PCNPQ8WW12 178 aaKnown RBP15.7■□□□□ 0.1
CHD3-204ENST00000439235 HRH4Q9H3N8 390 aa15.7■□□□□ 0.1
CHD3-204ENST00000439235 TMEM167BQ9NRX6 74 aa15.7■□□□□ 0.1
CHD3-204ENST00000439235 PYYP10082 97 aa15.69■□□□□ 0.1
CHD3-204ENST00000439235 PSMB3P49720 205 aa15.69■□□□□ 0.1
CHD3-204ENST00000439235 LYPD6BQ8NI32 183 aa15.69■□□□□ 0.1
CHD3-204ENST00000439235 ZNF503Q96F45 646 aa15.69■□□□□ 0.1
CHD3-204ENST00000439235 MRPS12O15235 138 aaKnown RBP15.68■□□□□ 0.1
CHD3-204ENST00000439235 OR10J4P0C629 311 aa15.68■□□□□ 0.1
CHD3-204ENST00000439235 HIST1H1EP10412 219 aaKnown RBP15.68■□□□□ 0.1
CHD3-204ENST00000439235 MEOX2P50222 304 aa15.68■□□□□ 0.1
CHD3-204ENST00000439235 PPT1P50897 306 aa15.68■□□□□ 0.1
CHD3-204ENST00000439235 ADAMTSL5Q6ZMM2 481 aa15.68■□□□□ 0.1
CHD3-204ENST00000439235 TCF24Q7RTU0 167 aa15.68■□□□□ 0.1
CHD3-204ENST00000439235 FXYD5Q96DB9 178 aa15.68■□□□□ 0.1
CHD3-204ENST00000439235 MLXQ9UH92 298 aa15.68■□□□□ 0.1
CHD3-204ENST00000439235 A0A087X0K7 114 aa15.67■□□□□ 0.1
CHD3-204ENST00000439235 ZNF785A8K8V0 405 aa15.67■□□□□ 0.1
CHD3-204ENST00000439235 SAP30O75446 220 aa15.67■□□□□ 0.1
CHD3-204ENST00000439235 IGLC2P0DOY2 106 aa15.67■□□□□ 0.1
CHD3-204ENST00000439235 GUK1Q16774 197 aa15.67■□□□□ 0.1
CHD3-204ENST00000439235 IFNA1P01562 189 aa15.66■□□□□ 0.1
CHD3-204ENST00000439235 NBEAP1P0C6P0 100 aa15.66■□□□□ 0.1
CHD3-204ENST00000439235 CD33P20138 364 aa15.66■□□□□ 0.1
CHD3-204ENST00000439235 RPL11P62913 178 aaKnown RBP15.66■□□□□ 0.1
CHD3-204ENST00000439235 SUN5Q8TC36 379 aa15.66■□□□□ 0.1
CHD3-204ENST00000439235 MCRIP2Q9BUT9 160 aaKnown RBP15.66■□□□□ 0.1
CHD3-204ENST00000439235 TMPRSS5Q9H3S3 457 aa15.66■□□□□ 0.1
CHD3-204ENST00000439235 FAM90A2PQ658T7 463 aa15.65■□□□□ 0.1
CHD3-204ENST00000439235 MANBALQ9NQG1 85 aa15.65■□□□□ 0.1
CHD3-204ENST00000439235 SMAD5-AS1Q9Y6J3 95 aa15.65■□□□□ 0.1
CHD3-204ENST00000439235 NBEAL1Q6ZS30 2694 aa15.64■□□□□ 0.09
CHD3-204ENST00000439235 TRBV19A0A075B6N1 114 aa15.64■□□□□ 0.09
CHD3-204ENST00000439235 H3BQ15 152 aa15.64■□□□□ 0.09
CHD3-204ENST00000439235 CCL20P78556 96 aa15.64■□□□□ 0.09
CHD3-204ENST00000439235 PDE6HQ13956 83 aa15.64■□□□□ 0.09
CHD3-204ENST00000439235 DEFB114Q30KQ6 69 aa15.64■□□□□ 0.09
CHD3-204ENST00000439235 SAMD13Q5VXD3 122 aa15.64■□□□□ 0.09
CHD3-204ENST00000439235 BLNKQ8WV28 456 aa15.64■□□□□ 0.09
CHD3-204ENST00000439235 NRN1Q9NPD7 142 aa15.64■□□□□ 0.09
CHD3-204ENST00000439235 ZNF586Q9NXT0 402 aa15.64■□□□□ 0.09
CHD3-204ENST00000439235 GNG13Q9P2W3 67 aa15.64■□□□□ 0.09
CHD3-204ENST00000439235 ARL2-SNX15V9GYD0 113 aa15.64■□□□□ 0.09
CHD3-204ENST00000439235 ZNF253O75346 499 aa15.63■□□□□ 0.09
CHD3-204ENST00000439235 INSL3P51460 131 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms