RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PRM2P04554 102 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 EMP1P54849 157 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 RPS20P60866 119 aaKnown RBP1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 CCL20P78556 96 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 RELAQ04206 551 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 SPA17Q15506 151 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 TMEM155Q4W5P6 130 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 MRPL30Q8TCC3 161 aaKnown RBP1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 ZNF625Q96I27 306 aaPredicted RBP1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 COMMD5Q9GZQ3 224 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 DCSTAMPQ9H295 470 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 GLTPQ9NZD2 209 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 DOCK3Q8IZD9 2030 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 RTL1A6NKG5 1358 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 RFX7Q2KHR2 1363 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 APCP25054 2843 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 LOC285556D6RIA3 1793 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 TSC2P49815 1807 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 CCDC88CQ9P219 2028 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 URB1O60287 2271 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 TRAV26-2A0A0B4J265 109 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 FAM236DA0A1B0GTK5 79 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 SIGLEC16A6NMB1 481 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 HMSDA8MTL9 139 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 CRYZL1O95825 349 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 SERPINA7P05543 415 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 GPX1P07203 203 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 MSMBP08118 114 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 SULT1A3P0DMM9 295 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 SULT1A4P0DMN0 295 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 FAM236CP0DP71 79 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 HOXA6P31267 233 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 EVX1P49640 407 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 AQP4P55087 323 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 HBA1P69905 142 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 CTAG1AP78358 180 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 RUNX1Q01196 453 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 RPL18Q07020 188 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 CDK10Q15131 360 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 AKIRIN2Q53H80 203 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 TMEM97Q5BJF2 176 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 AADACL3Q5VUY0 350 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 RPP25LQ8N5L8 163 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 SPACA4Q8TDM5 124 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 BORCS7Q96B45 105 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 DGCR14Q96DF8 476 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 CMSS1Q9BQ75 279 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 FBXL12Q9NXK8 326 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 DOK5Q9P104 306 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 FBXO5Q9UKT4 447 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 AKAP9Q99996 3911 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 RYR1P21817 5038 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 ARAP2Q8WZ64 1704 aa1.38□□□□□ -2.19
TRAPPC13-204ENST00000438419 RYR3Q15413 4870 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 IGKV1D-43A0A0B4J1Z2 117 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 A0A0D9SEW6 157 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 FABP5P3A8MUU1 101 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 HAND1O96004 215 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 IGHV3-7P01780 117 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 C1QAP02745 245 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 SIP14410 1827 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 HIST1H2BOP23527 126 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 HSD11B1P28845 292 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 HIST1H2BBP33778 126 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 HIST1H2BDP58876 126 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 HIST1H4AP62805 103 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 HIST1H2BCP62807 126 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 MRPS25P82663 173 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 HIST2H2BEQ16778 126 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 DYNAPQ8N1N2 210 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 HIST1H2BHQ93079 126 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 TSPAN32Q96QS1 320 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 HIST1H2BNQ99877 126 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 HIST1H2BMQ99879 126 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 NIPSNAP1Q9BPW8 284 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 DERL1Q9BUN8 251 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 TMEM147Q9BVK8 224 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 TLNRD1Q9H1K6 362 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 C11orf68Q9H3H3 251 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 PSTPIP2Q9H939 334 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 C8orf4Q9NR00 106 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 TP73-AS1Q9UF72 201 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 TENM1Q9UKZ4 2725 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 AMMECR1Q9Y4X0 333 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 TMEM56-RWDD3S4R434 201 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 DCHS2Q6V1P9 2916 aa1.37□□□□□ -2.19
TRAPPC13-204ENST00000438419 PLXNB2O15031 1838 aa1.36□□□□□ -2.19
TRAPPC13-204ENST00000438419 CSMD2Q7Z408 3487 aa1.36□□□□□ -2.19
TRAPPC13-204ENST00000438419 EDC4Q6P2E9 1401 aaKnown RBP1.36□□□□□ -2.19
TRAPPC13-204ENST00000438419 EXOC1LA0A1B0GW35 172 aa1.36□□□□□ -2.19
TRAPPC13-204ENST00000438419 IRGMA1A4Y4 181 aa1.36□□□□□ -2.19
TRAPPC13-204ENST00000438419 SLC22A1O15245 554 aa1.36□□□□□ -2.19
TRAPPC13-204ENST00000438419 ZNF737O75373 536 aa1.36□□□□□ -2.19
TRAPPC13-204ENST00000438419 IGKV1-5P01602 117 aa1.36□□□□□ -2.19
TRAPPC13-204ENST00000438419 TRGC1P0CF51 173 aa1.36□□□□□ -2.19
TRAPPC13-204ENST00000438419 EIF2B2P49770 351 aaKnown RBP1.36□□□□□ -2.19
TRAPPC13-204ENST00000438419 HIST1H3AP68431 136 aa1.36□□□□□ -2.19
TRAPPC13-204ENST00000438419 H3F3AP84243 136 aa1.36□□□□□ -2.19
TRAPPC13-204ENST00000438419 IAH1Q2TAA2 248 aaPredicted RBP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms