RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 WNT10AQ9GZT5 417 aa7.53□□□□□ -1.2
CUX1-206ENST00000437600 AKAP9Q99996 3911 aa7.53□□□□□ -1.2
CUX1-206ENST00000437600 SERF1AO75920 110 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 TYMSP04818 313 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 CAMPP49913 170 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 RPEL1Q2QD12 228 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 SRSF12Q8WXF0 261 aaKnown RBP7.52□□□□□ -1.21
CUX1-206ENST00000437600 SONP18583 2426 aaKnown RBP7.52□□□□□ -1.21
CUX1-206ENST00000437600 CREBBPQ92793 2442 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 PDZD2O15018 2839 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 NCBP2LA6PVI3 153 aaKnown RBP7.52□□□□□ -1.21
CUX1-206ENST00000437600 SLC25A5P05141 298 aaKnown RBP7.52□□□□□ -1.21
CUX1-206ENST00000437600 PSG1P11464 419 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 LGALS7P47929 136 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 PTTG1IPP53801 180 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 COL5A1-AS1Q5SY13 56 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 LINC00322Q6ZN03 302 aaPredicted RBP7.52□□□□□ -1.21
CUX1-206ENST00000437600 BAGE3Q86Y29 109 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 EXOC3-AS1Q8N2X6 119 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 FXYD5Q96DB9 178 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 BPESC1Q9GZL8 116 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 PRRC2AP48634 2157 aaKnown RBP7.52□□□□□ -1.21
CUX1-206ENST00000437600 SH2D7A6NKC9 451 aaPredicted RBP7.52□□□□□ -1.21
CUX1-206ENST00000437600 LIPFP07098 398 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 PF4V1P10720 104 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 CD99P14209 185 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 CRISP2P16562 243 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 LINC00310P59036 64 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 KRTAP10-9P60411 292 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 TMEM183BQ1AE95 376 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 DYNAPQ8N1N2 210 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 FAM19A2Q8N3H0 131 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 LINC00311Q8N616 119 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 CMTM2Q8TAZ6 248 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 VN1R17PQ8TDU5 208 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 VAMP8Q9BV40 100 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 CHODLQ9H9P2 273 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 ZFP30Q9Y2G7 519 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 MYO9AB2RTY4 2548 aa7.52□□□□□ -1.21
CUX1-206ENST00000437600 LOC105371242A0A075B767 164 aa7.51□□□□□ -1.21
CUX1-206ENST00000437600 NBEAP1P0C6P0 100 aa7.51□□□□□ -1.21
CUX1-206ENST00000437600 C11orf52Q96A22 123 aa7.51□□□□□ -1.21
CUX1-206ENST00000437600 RCHY1Q96PM5 261 aa7.51□□□□□ -1.21
CUX1-206ENST00000437600 C20orf144Q9BQM9 153 aa7.51□□□□□ -1.21
CUX1-206ENST00000437600 C20orf202A1L168 122 aa7.51□□□□□ -1.21
CUX1-206ENST00000437600 TEX22C9J3V5 150 aa7.51□□□□□ -1.21
CUX1-206ENST00000437600 FSTL3O95633 263 aa7.51□□□□□ -1.21
CUX1-206ENST00000437600 COMPP49747 757 aaPredicted RBP7.51□□□□□ -1.21
CUX1-206ENST00000437600 Q6ZWC4 215 aa7.51□□□□□ -1.21
CUX1-206ENST00000437600 MRPL52Q86TS9 123 aaKnown RBP7.51□□□□□ -1.21
CUX1-206ENST00000437600 ZNF329Q86UD4 541 aa7.51□□□□□ -1.21
CUX1-206ENST00000437600 DTX2Q86UW9 622 aa7.51□□□□□ -1.21
CUX1-206ENST00000437600 TXNDC17Q9BRA2 123 aa7.51□□□□□ -1.21
CUX1-206ENST00000437600 RNF114Q9Y508 228 aa7.51□□□□□ -1.21
CUX1-206ENST00000437600 A0A1W2PRE2 83 aa7.5□□□□□ -1.21
CUX1-206ENST00000437600 J3QKU1 62 aa7.5□□□□□ -1.21
CUX1-206ENST00000437600 TMEM30BQ3MIR4 351 aa7.5□□□□□ -1.21
CUX1-206ENST00000437600 SHISA2Q6UWI4 295 aa7.5□□□□□ -1.21
CUX1-206ENST00000437600 BTF3L4Q96K17 158 aa7.5□□□□□ -1.21
CUX1-206ENST00000437600 VWC2LB2RUY7 222 aa7.5□□□□□ -1.21
CUX1-206ENST00000437600 C9JCJ5 164 aa7.5□□□□□ -1.21
CUX1-206ENST00000437600 SCGB2A2Q13296 93 aa7.5□□□□□ -1.21
CUX1-206ENST00000437600 TPTE2P1Q5T6R2 138 aa7.5□□□□□ -1.21
CUX1-206ENST00000437600 TCF24Q7RTU0 167 aa7.5□□□□□ -1.21
CUX1-206ENST00000437600 NEU4Q8WWR8 484 aaPredicted RBP7.5□□□□□ -1.21
CUX1-206ENST00000437600 HSPB9Q9BQS6 159 aa7.5□□□□□ -1.21
CUX1-206ENST00000437600 GNB4Q9HAV0 340 aa7.5□□□□□ -1.21
CUX1-206ENST00000437600 IGHV3OR16-10A0A075B7F0 116 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 FNDC10F2Z333 226 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 IGF2BP2-AS1Q96M15 143 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 ZNF48Q96MX3 618 aaPredicted RBP7.49□□□□□ -1.21
CUX1-206ENST00000437600 PEX7O00628 323 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 HYPMO75409 117 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 CRYGBP07316 175 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 HTR1DP28221 377 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 ZNF137PP52743 207 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 YPEL3P61236 119 aaPredicted RBP7.49□□□□□ -1.21
CUX1-206ENST00000437600 IGFL4Q6B9Z1 124 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 TEX43Q6ZNM6 134 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 TEX45Q8NA69 505 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 ALKBH7Q9BT30 221 aaPredicted RBP7.49□□□□□ -1.21
CUX1-206ENST00000437600 CCL25O15444 150 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 PMCHP20382 165 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 SRIP30626 198 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 TPPP2P59282 170 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 SELENOTP62341 195 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 CIARTQ8N365 385 aaPredicted RBP7.49□□□□□ -1.21
CUX1-206ENST00000437600 SAMD10Q9BYL1 202 aa7.49□□□□□ -1.21
CUX1-206ENST00000437600 NF1P21359 2839 aa7.48□□□□□ -1.21
CUX1-206ENST00000437600 ZNF253O75346 499 aa7.48□□□□□ -1.21
CUX1-206ENST00000437600 COX6B1P14854 86 aa7.48□□□□□ -1.21
CUX1-206ENST00000437600 NTF3P20783 257 aa7.48□□□□□ -1.21
CUX1-206ENST00000437600 UBE2G1P62253 170 aa7.48□□□□□ -1.21
CUX1-206ENST00000437600 GDF5OSQ5U4N7 250 aa7.48□□□□□ -1.21
CUX1-206ENST00000437600 Q6ZVH6 145 aa7.48□□□□□ -1.21
CUX1-206ENST00000437600 VMO1Q7Z5L0 202 aa7.48□□□□□ -1.21
CUX1-206ENST00000437600 STPG4Q8N801 248 aa7.48□□□□□ -1.21
CUX1-206ENST00000437600 OR1L4Q8NGR5 311 aa7.48□□□□□ -1.21
CUX1-206ENST00000437600 PERPQ96FX8 193 aa7.48□□□□□ -1.21
CUX1-206ENST00000437600 ZNF479Q96JC4 524 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 1043.2 ms