RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 C19orf71A6NCJ1 209 aa13.11□□□□□ -0.31
LIMK1-203ENST00000435201 NUPR1O60356 82 aa13.11□□□□□ -0.31
LIMK1-203ENST00000435201 PKIAP61925 76 aa13.11□□□□□ -0.31
LIMK1-203ENST00000435201 PDE6HQ13956 83 aa13.11□□□□□ -0.31
LIMK1-203ENST00000435201 SIGLEC15Q6ZMC9 328 aa13.11□□□□□ -0.31
LIMK1-203ENST00000435201 ATP5L2Q7Z4Y8 100 aa13.11□□□□□ -0.31
LIMK1-203ENST00000435201 VN1R17PQ8TDU5 208 aa13.11□□□□□ -0.31
LIMK1-203ENST00000435201 NEU1Q99519 415 aa13.11□□□□□ -0.31
LIMK1-203ENST00000435201 PRSS22Q9GZN4 317 aa13.11□□□□□ -0.31
LIMK1-203ENST00000435201 WNK2Q9Y3S1 2297 aa13.11□□□□□ -0.31
LIMK1-203ENST00000435201 TSTD3H0UI37 97 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 K7EQM0 130 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 P01737 135 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 APCSP02743 223 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 IQCJQ1A5X6 159 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 KLK9Q2XQG4 91 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 GOLT1AQ6ZVE7 132 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 TMEM75Q8N9X5 138 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 ZNF414Q96IQ9 312 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 CCL19Q99731 98 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 FBXL7Q9UJT9 491 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 KLK9Q9UKQ9 250 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 HIGD1CA8MV81 97 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 A8MWL6 223 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 SERF1AO75920 110 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 S100A7P31151 101 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 LINC00310P59036 64 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 DAZAP1Q96EP5 407 aaKnown RBP13.1□□□□□ -0.31
LIMK1-203ENST00000435201 HSPB9Q9BQS6 159 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 PIEZO1Q92508 2521 aa13.1□□□□□ -0.31
LIMK1-203ENST00000435201 CENPVL3A0A0U1RRI6 287 aa13.09□□□□□ -0.31
LIMK1-203ENST00000435201 IGLV2-11P01706 119 aa13.09□□□□□ -0.31
LIMK1-203ENST00000435201 PAX8Q06710 450 aa13.09□□□□□ -0.31
LIMK1-203ENST00000435201 MS4A10Q96PG2 267 aa13.09□□□□□ -0.31
LIMK1-203ENST00000435201 TMUB1Q9BVT8 246 aa13.09□□□□□ -0.31
LIMK1-203ENST00000435201 GFRA4Q9GZZ7 299 aa13.09□□□□□ -0.31
LIMK1-203ENST00000435201 GNB4Q9HAV0 340 aa13.09□□□□□ -0.31
LIMK1-203ENST00000435201 OR2T8A6NH00 312 aa13.08□□□□□ -0.32
LIMK1-203ENST00000435201 NDUFS8O00217 210 aa13.08□□□□□ -0.32
LIMK1-203ENST00000435201 BMPR1BO00238 502 aa13.08□□□□□ -0.32
LIMK1-203ENST00000435201 UNQ5815/PRO19632Q6UWF5 114 aa13.08□□□□□ -0.32
LIMK1-203ENST00000435201 PRNTQ86SH4 94 aa13.08□□□□□ -0.32
LIMK1-203ENST00000435201 PIP4P2Q8N4L2 257 aa13.08□□□□□ -0.32
LIMK1-203ENST00000435201 SOX21Q9Y651 276 aaPredicted RBP13.08□□□□□ -0.32
LIMK1-203ENST00000435201 TRAV8-1A0A0A6YYK1 113 aa13.08□□□□□ -0.32
LIMK1-203ENST00000435201 FAM231BA6NCW3 169 aa13.08□□□□□ -0.32
LIMK1-203ENST00000435201 CTSGP08311 255 aa13.08□□□□□ -0.32
LIMK1-203ENST00000435201 LINC00322Q6ZN03 302 aaPredicted RBP13.08□□□□□ -0.32
LIMK1-203ENST00000435201 OR4B1Q8NGF8 309 aa13.08□□□□□ -0.32
LIMK1-203ENST00000435201 C17orf77Q96MU5 243 aa13.08□□□□□ -0.32
LIMK1-203ENST00000435201 AAMDCQ9H7C9 122 aa13.08□□□□□ -0.32
LIMK1-203ENST00000435201 ZFP30Q9Y2G7 519 aa13.08□□□□□ -0.32
LIMK1-203ENST00000435201 NPIPB6E9PJ23 425 aa13.07□□□□□ -0.32
LIMK1-203ENST00000435201 ATP6V0E1O15342 81 aa13.07□□□□□ -0.32
LIMK1-203ENST00000435201 IGHV3-23P01764 117 aa13.07□□□□□ -0.32
LIMK1-203ENST00000435201 RPL7P18124 248 aaKnown RBP13.07□□□□□ -0.32
LIMK1-203ENST00000435201 SRIP30626 198 aa13.07□□□□□ -0.32
LIMK1-203ENST00000435201 ECSCRQ19T08 205 aa13.07□□□□□ -0.32
LIMK1-203ENST00000435201 RABAC1Q9UI14 185 aa13.07□□□□□ -0.32
LIMK1-203ENST00000435201 TRAV20A0A0B4J274 112 aa13.06□□□□□ -0.32
LIMK1-203ENST00000435201 A0A1B0GXF2 115 aa13.06□□□□□ -0.32
LIMK1-203ENST00000435201 PSG9Q00887 426 aa13.06□□□□□ -0.32
LIMK1-203ENST00000435201 KIAA1644Q3SXP7 199 aa13.06□□□□□ -0.32
LIMK1-203ENST00000435201 C9orf152Q5JTZ5 239 aa13.06□□□□□ -0.32
LIMK1-203ENST00000435201 C10orf105Q8TEF2 133 aa13.06□□□□□ -0.32
LIMK1-203ENST00000435201 SERTM2A0A1B0GWG4 89 aa13.06□□□□□ -0.32
LIMK1-203ENST00000435201 DIRC3C9JPN6 131 aa13.06□□□□□ -0.32
LIMK1-203ENST00000435201 F2Z2F3 143 aa13.06□□□□□ -0.32
LIMK1-203ENST00000435201 COL8A1P27658 744 aa13.06□□□□□ -0.32
LIMK1-203ENST00000435201 SLAQ13239 276 aa13.06□□□□□ -0.32
LIMK1-203ENST00000435201 PSG3Q16557 428 aa13.06□□□□□ -0.32
LIMK1-203ENST00000435201 BCL6BQ8N143 479 aaPredicted RBP13.06□□□□□ -0.32
LIMK1-203ENST00000435201 ZNF502Q8TBZ5 544 aa13.06□□□□□ -0.32
LIMK1-203ENST00000435201 SAMD10Q9BYL1 202 aa13.06□□□□□ -0.32
LIMK1-203ENST00000435201 ZNF253O75346 499 aa13.05□□□□□ -0.32
LIMK1-203ENST00000435201 SCGB1D1O95968 90 aa13.05□□□□□ -0.32
LIMK1-203ENST00000435201 C15orf32Q32M92 178 aa13.05□□□□□ -0.32
LIMK1-203ENST00000435201 CLEC2AQ6UVW9 174 aa13.05□□□□□ -0.32
LIMK1-203ENST00000435201 CIARTQ8N365 385 aaPredicted RBP13.05□□□□□ -0.32
LIMK1-203ENST00000435201 ARL6IP6Q8N6S5 226 aa13.05□□□□□ -0.32
LIMK1-203ENST00000435201 C5orf56Q8N8D9 126 aa13.05□□□□□ -0.32
LIMK1-203ENST00000435201 PSG8Q9UQ74 426 aa13.05□□□□□ -0.32
LIMK1-203ENST00000435201 IGHV1-69DA0A0B4J2H0 117 aa13.04□□□□□ -0.32
LIMK1-203ENST00000435201 IGHV4-61A0A0C4DH41 118 aa13.04□□□□□ -0.32
LIMK1-203ENST00000435201 VWC2LB2RUY7 222 aa13.04□□□□□ -0.32
LIMK1-203ENST00000435201 IGHV1-69P01742 117 aa13.04□□□□□ -0.32
LIMK1-203ENST00000435201 CSN1S1P47710 185 aa13.04□□□□□ -0.32
LIMK1-203ENST00000435201 HBBP68871 147 aa13.04□□□□□ -0.32
LIMK1-203ENST00000435201 RHOGP84095 191 aa13.04□□□□□ -0.32
LIMK1-203ENST00000435201 GDF5OSQ5U4N7 250 aa13.04□□□□□ -0.32
LIMK1-203ENST00000435201 C16orf54Q6UWD8 224 aa13.04□□□□□ -0.32
LIMK1-203ENST00000435201 RBPMS2Q6ZRY4 209 aaKnown RBP13.04□□□□□ -0.32
LIMK1-203ENST00000435201 TCF24Q7RTU0 167 aa13.04□□□□□ -0.32
LIMK1-203ENST00000435201 KCNS1Q96KK3 526 aa13.04□□□□□ -0.32
LIMK1-203ENST00000435201 NAGKQ9UJ70 344 aa13.04□□□□□ -0.32
LIMK1-203ENST00000435201 GTSF1Q8WW33 167 aa13.04□□□□□ -0.32
LIMK1-203ENST00000435201 NOL4LQ96MY1 436 aaPredicted RBP13.04□□□□□ -0.32
LIMK1-203ENST00000435201 MOB4Q9Y3A3 225 aa13.04□□□□□ -0.32
LIMK1-203ENST00000435201 PAX1P15863 534 aa13.03□□□□□ -0.32
LIMK1-203ENST00000435201 DDTP30046 118 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms