RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 Q8N6K4 173 aa8.22□□□□□ -1.09
CD44-210ENST00000434472 Q8N976 141 aa8.22□□□□□ -1.09
CD44-210ENST00000434472 PGLYRP4Q96LB8 373 aa8.22□□□□□ -1.09
CD44-210ENST00000434472 TXN2Q99757 166 aa8.22□□□□□ -1.09
CD44-210ENST00000434472 C1RLQ9NZP8 487 aa8.22□□□□□ -1.09
CD44-210ENST00000434472 ROS1P08922 2347 aa8.22□□□□□ -1.09
CD44-210ENST00000434472 FBLL1A6NHQ2 334 aaKnown RBP8.21□□□□□ -1.09
CD44-210ENST00000434472 HAX1O00165 279 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 LY6HO94772 140 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 IGLV2-11P01706 119 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 C3orf79P0CE67 100 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 SFTPCP11686 197 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 NTF3P20783 257 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 FOXA3P55318 350 aaPredicted RBP8.21□□□□□ -1.09
CD44-210ENST00000434472 PSG9Q00887 426 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 PSG3Q16557 428 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 SIGLEC15Q6ZMC9 328 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 EXOC3-AS1Q8N2X6 119 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 OR2D3Q8NGH3 330 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 GTSF1Q8WW33 167 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 CHCHD1Q96BP2 118 aaKnown RBP8.21□□□□□ -1.09
CD44-210ENST00000434472 ZNF414Q96IQ9 312 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 FANCD2OSQ96PS1 177 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 AAMDCQ9H7C9 122 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 PSG8Q9UQ74 426 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 PAM16Q9Y3D7 125 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 MUC6Q6W4X9 2439 aa8.21□□□□□ -1.09
CD44-210ENST00000434472 NCBP2LA6PVI3 153 aaKnown RBP8.21□□□□□ -1.1
CD44-210ENST00000434472 VWC2LB2RUY7 222 aa8.21□□□□□ -1.1
CD44-210ENST00000434472 M0R2Z0 102 aa8.21□□□□□ -1.1
CD44-210ENST00000434472 CHEK1O14757 476 aa8.21□□□□□ -1.1
CD44-210ENST00000434472 EREGO14944 169 aa8.21□□□□□ -1.1
CD44-210ENST00000434472 MRPS12O15235 138 aaKnown RBP8.21□□□□□ -1.1
CD44-210ENST00000434472 TMEM11P17152 192 aa8.21□□□□□ -1.1
CD44-210ENST00000434472 FCGR2BP31994 310 aaPredicted RBP8.21□□□□□ -1.1
CD44-210ENST00000434472 CSN1S1P47710 185 aa8.21□□□□□ -1.1
CD44-210ENST00000434472 NUTF2P61970 127 aaKnown RBP8.21□□□□□ -1.1
CD44-210ENST00000434472 RIGQ13278 110 aa8.21□□□□□ -1.1
CD44-210ENST00000434472 CDSNQ15517 529 aa8.21□□□□□ -1.1
CD44-210ENST00000434472 Q56UQ5 140 aa8.21□□□□□ -1.1
CD44-210ENST00000434472 ASPHD1Q5U4P2 390 aa8.21□□□□□ -1.1
CD44-210ENST00000434472 Q6AWC8 147 aa8.21□□□□□ -1.1
CD44-210ENST00000434472 CIARTQ8N365 385 aaPredicted RBP8.21□□□□□ -1.1
CD44-210ENST00000434472 KLHDC1Q8N7A1 406 aa8.21□□□□□ -1.1
CD44-210ENST00000434472 SSBP4Q9BWG4 385 aaPredicted RBP8.21□□□□□ -1.1
CD44-210ENST00000434472 SNHG12Q9BXW3 62 aa8.21□□□□□ -1.1
CD44-210ENST00000434472 C21orf62Q9NYP8 219 aa8.21□□□□□ -1.1
CD44-210ENST00000434472 PCNX1Q96RV3 2341 aa8.21□□□□□ -1.1
CD44-210ENST00000434472 MAP1BP46821 2468 aaKnown RBP8.21□□□□□ -1.1
CD44-210ENST00000434472 C20orf202A1L168 122 aa8.2□□□□□ -1.1
CD44-210ENST00000434472 A6NNC1 897 aa8.2□□□□□ -1.1
CD44-210ENST00000434472 FAM106CPP0CH98 169 aa8.2□□□□□ -1.1
CD44-210ENST00000434472 SPATA45Q537H7 98 aa8.2□□□□□ -1.1
CD44-210ENST00000434472 RNASEKQ6P5S7 137 aaKnown RBP8.2□□□□□ -1.1
CD44-210ENST00000434472 GATD1Q8NB37 220 aa8.2□□□□□ -1.1
CD44-210ENST00000434472 NDFIP1Q9BT67 221 aa8.2□□□□□ -1.1
CD44-210ENST00000434472 SIRPDQ9H106 197 aa8.2□□□□□ -1.1
CD44-210ENST00000434472 DMXL1Q9Y485 3027 aa8.2□□□□□ -1.1
CD44-210ENST00000434472 A0A1W2PRD5 423 aa8.19□□□□□ -1.1
CD44-210ENST00000434472 A0A1W2PRF3 423 aa8.19□□□□□ -1.1
CD44-210ENST00000434472 A0A1W2PRM7 423 aa8.19□□□□□ -1.1
CD44-210ENST00000434472 FAM181BA6NEQ2 426 aa8.19□□□□□ -1.1
CD44-210ENST00000434472 RPL7P18124 248 aaKnown RBP8.19□□□□□ -1.1
CD44-210ENST00000434472 CTRLP40313 264 aa8.19□□□□□ -1.1
CD44-210ENST00000434472 TDRG1Q3Y452 100 aa8.19□□□□□ -1.1
CD44-210ENST00000434472 FAM19A2Q8N3H0 131 aa8.19□□□□□ -1.1
CD44-210ENST00000434472 RNF114Q9Y508 228 aa8.19□□□□□ -1.1
CD44-210ENST00000434472 POLEQ07864 2286 aa8.19□□□□□ -1.1
CD44-210ENST00000434472 LOC102724200A0A096LPH7 203 aaPredicted RBP8.18□□□□□ -1.1
CD44-210ENST00000434472 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.18□□□□□ -1.1
CD44-210ENST00000434472 TRAV8-1A0A0A6YYK1 113 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 A0A1B0GUT8 65 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 CT45A10P0DMU9 189 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 BTF3P20290 206 aaKnown RBP8.18□□□□□ -1.1
CD44-210ENST00000434472 CD24P25063 80 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 UBE2E1P51965 193 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 EFNA4P52798 201 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 KLK9Q2XQG4 91 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 KLF17Q5JT82 389 aaPredicted RBP8.18□□□□□ -1.1
CD44-210ENST00000434472 FAM110DQ8TAY7 271 aaPredicted RBP8.18□□□□□ -1.1
CD44-210ENST00000434472 ZC2HC1AQ96GY0 325 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 UQCR10Q9UDW1 63 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 KLK9Q9UKQ9 250 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 IGHV2-70DA0A0C4DH43 119 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 TCAPO15273 167 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 TOX4O94842 621 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 NDUFB8O95169 186 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 OR5AL1P0C617 328 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 RNF224P0DH78 156 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 SAPCD1Q5SSQ6 148 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 DYNAPQ8N1N2 210 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 C17orf77Q96MU5 243 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 LPAR2Q9HBW0 351 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 RABAC1Q9UI14 185 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 PTPRQQ9UMZ3 2332 aa8.18□□□□□ -1.1
CD44-210ENST00000434472 NBEAQ8NFP9 2946 aa8.17□□□□□ -1.1
CD44-210ENST00000434472 PLXNB1O43157 2135 aa8.17□□□□□ -1.1
CD44-210ENST00000434472 MGAQ8IWI9 3026 aa8.17□□□□□ -1.1
CD44-210ENST00000434472 SH2D7A6NKC9 451 aaPredicted RBP8.17□□□□□ -1.1
CD44-210ENST00000434472 F8W735 103 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms