RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 BCL6BQ8N143 479 aaPredicted RBP12.45□□□□□ -0.42
SCARF1-203ENST00000434376 EXOC3-AS1Q8N2X6 119 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 TSKUQ8WUA8 353 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 TIMD4Q96H15 378 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 ALKBH7Q9BT30 221 aaPredicted RBP12.45□□□□□ -0.42
SCARF1-203ENST00000434376 AMMECR1Q9Y4X0 333 aaPredicted RBP12.45□□□□□ -0.42
SCARF1-203ENST00000434376 TMSB15BA0A087X1C1 80 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 BUB1B-PAK6H3BSN5 160 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 GNLYP22749 145 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 TSPOP30536 169 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 COTL1Q14019 142 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 PMCHL2Q9BQD1 86 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 C2CD3Q4AC94 2353 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 WDR73Q6P4I2 378 aa12.44□□□□□ -0.42
SCARF1-203ENST00000434376 TMEM136Q6ZRR5 245 aa12.44□□□□□ -0.42
SCARF1-203ENST00000434376 IGLV2-23P01705 113 aa12.44□□□□□ -0.42
SCARF1-203ENST00000434376 PDPNQ86YL7 162 aa12.44□□□□□ -0.42
SCARF1-203ENST00000434376 ZNF596Q8TC21 504 aa12.44□□□□□ -0.42
SCARF1-203ENST00000434376 SIGLEC9Q9Y336 463 aa12.44□□□□□ -0.42
SCARF1-203ENST00000434376 SNAI2O43623 268 aa12.44□□□□□ -0.42
SCARF1-203ENST00000434376 UBE2G1P62253 170 aa12.44□□□□□ -0.42
SCARF1-203ENST00000434376 ECSCRQ19T08 205 aa12.44□□□□□ -0.42
SCARF1-203ENST00000434376 C2orf83Q53S99 150 aa12.44□□□□□ -0.42
SCARF1-203ENST00000434376 RAB1CQ92928 201 aa12.44□□□□□ -0.42
SCARF1-203ENST00000434376 ZC2HC1AQ96GY0 325 aa12.44□□□□□ -0.42
SCARF1-203ENST00000434376 C17orf77Q96MU5 243 aa12.44□□□□□ -0.42
SCARF1-203ENST00000434376 GNB1LQ9BYB4 327 aa12.44□□□□□ -0.42
SCARF1-203ENST00000434376 TMEM177Q53S58 311 aa12.43□□□□□ -0.42
SCARF1-203ENST00000434376 TMEM167AQ8TBQ9 72 aa12.43□□□□□ -0.42
SCARF1-203ENST00000434376 JKAMPQ9P055 326 aa12.43□□□□□ -0.42
SCARF1-203ENST00000434376 AMY1AP04745 511 aa12.43□□□□□ -0.42
SCARF1-203ENST00000434376 HTR1DP28221 377 aa12.43□□□□□ -0.42
SCARF1-203ENST00000434376 Q0VG73 95 aa12.43□□□□□ -0.42
SCARF1-203ENST00000434376 LOC105371242A0A075B767 164 aa12.42□□□□□ -0.42
SCARF1-203ENST00000434376 CX3CL1P78423 397 aa12.42□□□□□ -0.42
SCARF1-203ENST00000434376 NIT1Q86X76 327 aa12.42□□□□□ -0.42
SCARF1-203ENST00000434376 ZNF207O43670 478 aaKnown RBP12.42□□□□□ -0.42
SCARF1-203ENST00000434376 CSN3P07498 182 aa12.42□□□□□ -0.42
SCARF1-203ENST00000434376 NRGNQ92686 78 aa12.42□□□□□ -0.42
SCARF1-203ENST00000434376 ZNF257Q9Y2Q1 563 aa12.42□□□□□ -0.42
SCARF1-203ENST00000434376 IGLC7A0M8Q6 106 aa12.42□□□□□ -0.42
SCARF1-203ENST00000434376 LIPFP07098 398 aa12.42□□□□□ -0.42
SCARF1-203ENST00000434376 PSG1P11464 419 aa12.42□□□□□ -0.42
SCARF1-203ENST00000434376 Q8N976 141 aa12.42□□□□□ -0.42
SCARF1-203ENST00000434376 TMUB1Q9BVT8 246 aa12.42□□□□□ -0.42
SCARF1-203ENST00000434376 SLC25A2Q9BXI2 301 aa12.42□□□□□ -0.42
SCARF1-203ENST00000434376 TMEM167BQ9NRX6 74 aa12.42□□□□□ -0.42
SCARF1-203ENST00000434376 IGKV3-7A0A075B6H7 116 aa12.41□□□□□ -0.42
SCARF1-203ENST00000434376 FAM90A9PA6NNJ1 464 aa12.41□□□□□ -0.42
SCARF1-203ENST00000434376 TCF24Q7RTU0 167 aa12.41□□□□□ -0.42
SCARF1-203ENST00000434376 TMEM219Q86XT9 240 aa12.41□□□□□ -0.42
SCARF1-203ENST00000434376 OR2J3O76001 311 aa12.41□□□□□ -0.42
SCARF1-203ENST00000434376 MC5RP33032 325 aa12.41□□□□□ -0.42
SCARF1-203ENST00000434376 USP24Q9UPU5 2620 aa12.41□□□□□ -0.42
SCARF1-203ENST00000434376 C19orf84I3L1E1 186 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 M0R3E3 92 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 HLA-DQA1P01909 254 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 MT-ND6P03923 174 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 FCGR2BP31994 310 aaPredicted RBP12.4□□□□□ -0.42
SCARF1-203ENST00000434376 MPV17L2Q567V2 206 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 ZNF841Q6ZN19 808 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 DYNAPQ8N1N2 210 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 TXNDC17Q9BRA2 123 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 hDV102S1A0JD36 115 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 IGLL1P15814 213 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 BPIFB3P59826 476 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 PRNTQ86SH4 94 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 RASL11BQ9BPW5 248 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 NUDT3O95989 172 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 IL4P05112 153 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 ZFP36P26651 326 aaKnown RBP12.4□□□□□ -0.42
SCARF1-203ENST00000434376 DLX6P56179 175 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 C18orf32Q8TCD1 76 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 COX11Q9Y6N1 276 aa12.4□□□□□ -0.42
SCARF1-203ENST00000434376 TCRBV4S1A1TA0A5B7 111 aa12.39□□□□□ -0.43
SCARF1-203ENST00000434376 NBEAP1P0C6P0 100 aa12.39□□□□□ -0.43
SCARF1-203ENST00000434376 UBE2V1Q13404 147 aa12.39□□□□□ -0.43
SCARF1-203ENST00000434376 BRD3OSQ6XYD6 125 aa12.39□□□□□ -0.43
SCARF1-203ENST00000434376 GOLT1AQ6ZVE7 132 aa12.39□□□□□ -0.43
SCARF1-203ENST00000434376 IGKV1D-37A0A075B6S9 117 aa12.39□□□□□ -0.43
SCARF1-203ENST00000434376 CTRLP40313 264 aa12.39□□□□□ -0.43
SCARF1-203ENST00000434376 C3orf36Q3SXR2 165 aa12.39□□□□□ -0.43
SCARF1-203ENST00000434376 BPESC1Q9GZL8 116 aa12.39□□□□□ -0.43
SCARF1-203ENST00000434376 ZNF138P52744 262 aa12.39□□□□□ -0.43
SCARF1-203ENST00000434376 EBLN2Q6P2I7 272 aa12.39□□□□□ -0.43
SCARF1-203ENST00000434376 MAPK1IP1LQ8NDC0 245 aa12.39□□□□□ -0.43
SCARF1-203ENST00000434376 OR2T8A6NH00 312 aa12.38□□□□□ -0.43
SCARF1-203ENST00000434376 POU2AF1Q16633 256 aa12.38□□□□□ -0.43
SCARF1-203ENST00000434376 SSX8Q7RTT4 187 aa12.38□□□□□ -0.43
SCARF1-203ENST00000434376 DPM3Q9P2X0 92 aa12.38□□□□□ -0.43
SCARF1-203ENST00000434376 SOX21Q9Y651 276 aaPredicted RBP12.38□□□□□ -0.43
SCARF1-203ENST00000434376 FASNP49327 2511 aaKnown RBP12.38□□□□□ -0.43
SCARF1-203ENST00000434376 TRBV9A0A0B4J1U6 114 aa12.38□□□□□ -0.43
SCARF1-203ENST00000434376 ITGB1BP1O14713 200 aa12.38□□□□□ -0.43
SCARF1-203ENST00000434376 OR10J3Q5JRS4 329 aa12.38□□□□□ -0.43
SCARF1-203ENST00000434376 FAM167A-AS1Q96KT0 104 aa12.38□□□□□ -0.43
SCARF1-203ENST00000434376 FAM181BA6NEQ2 426 aa12.37□□□□□ -0.43
SCARF1-203ENST00000434376 C9JCJ5 164 aa12.37□□□□□ -0.43
SCARF1-203ENST00000434376 GNG7O60262 68 aa12.37□□□□□ -0.43
SCARF1-203ENST00000434376 LGALS7P47929 136 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms