RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 OR5AS1Q8N127 324 aa-0.1□□□□□ -2.43
LINC01239-201ENST00000433645 ZC2HC1AQ96GY0 325 aa-0.1□□□□□ -2.43
LINC01239-201ENST00000433645 RNF11Q9Y3C5 154 aa-0.1□□□□□ -2.43
LINC01239-201ENST00000433645 ZFYVE26Q68DK2 2539 aa-0.1□□□□□ -2.43
LINC01239-201ENST00000433645 NUP98P52948 1817 aa-0.1□□□□□ -2.43
LINC01239-201ENST00000433645 TRBV19A0A075B6N1 114 aa-0.11□□□□□ -2.43
LINC01239-201ENST00000433645 SMIM9A6NGZ8 99 aa-0.11□□□□□ -2.43
LINC01239-201ENST00000433645 JMJD7-PLA2G4BH0Y9G9 81 aa-0.11□□□□□ -2.43
LINC01239-201ENST00000433645 OR7C1O76099 320 aaPredicted RBP-0.11□□□□□ -2.43
LINC01239-201ENST00000433645 CD2P06729 351 aa-0.11□□□□□ -2.43
LINC01239-201ENST00000433645 CCL4P13236 92 aa-0.11□□□□□ -2.43
LINC01239-201ENST00000433645 PIGPP57054 158 aa-0.11□□□□□ -2.43
LINC01239-201ENST00000433645 BCL2L15Q5TBC7 163 aa-0.11□□□□□ -2.43
LINC01239-201ENST00000433645 MUCL1Q96DR8 90 aa-0.11□□□□□ -2.43
LINC01239-201ENST00000433645 TEX37Q96LM6 180 aa-0.11□□□□□ -2.43
LINC01239-201ENST00000433645 PRELID3BQ9Y3B1 194 aa-0.11□□□□□ -2.43
LINC01239-201ENST00000433645 DMBT1Q9UGM3 2413 aaPredicted RBP-0.12□□□□□ -2.43
LINC01239-201ENST00000433645 TPRP12270 2363 aaKnown RBP-0.12□□□□□ -2.43
LINC01239-201ENST00000433645 TRBV30A0A0K0K1B3 111 aa-0.12□□□□□ -2.43
LINC01239-201ENST00000433645 GGCTO75223 188 aaKnown RBP-0.12□□□□□ -2.43
LINC01239-201ENST00000433645 KDELR1P24390 212 aa-0.12□□□□□ -2.43
LINC01239-201ENST00000433645 SPINT3P49223 89 aa-0.12□□□□□ -2.43
LINC01239-201ENST00000433645 CDK6Q00534 326 aa-0.12□□□□□ -2.43
LINC01239-201ENST00000433645 C6orf52Q5T4I8 152 aa-0.12□□□□□ -2.43
LINC01239-201ENST00000433645 SPINK6Q6UWN8 80 aa-0.12□□□□□ -2.43
LINC01239-201ENST00000433645 Q8TAT8 98 aa-0.12□□□□□ -2.43
LINC01239-201ENST00000433645 STAG3L4Q8TBR4 150 aa-0.12□□□□□ -2.43
LINC01239-201ENST00000433645 IMUPQ9GZP8 106 aa-0.12□□□□□ -2.43
LINC01239-201ENST00000433645 COL7A1Q02388 2944 aa-0.12□□□□□ -2.43
LINC01239-201ENST00000433645 PLB1Q6P1J6 1458 aa-0.13□□□□□ -2.43
LINC01239-201ENST00000433645 OR10J4P0C629 311 aa-0.13□□□□□ -2.43
LINC01239-201ENST00000433645 MYL6P60660 151 aa-0.13□□□□□ -2.43
LINC01239-201ENST00000433645 GNPDA2Q8TDQ7 276 aa-0.13□□□□□ -2.43
LINC01239-201ENST00000433645 PARD6GQ9BYG4 376 aaPredicted RBP-0.13□□□□□ -2.43
LINC01239-201ENST00000433645 WFDC10AQ9H1F0 79 aa-0.13□□□□□ -2.43
LINC01239-201ENST00000433645 OR52A1Q9UKL2 312 aa-0.13□□□□□ -2.43
LINC01239-201ENST00000433645 NCOR2Q9Y618 2525 aa-0.13□□□□□ -2.43
LINC01239-201ENST00000433645 HRNRQ86YZ3 2850 aaPredicted RBP-0.13□□□□□ -2.43
LINC01239-201ENST00000433645 BCL9O00512 1426 aa-0.13□□□□□ -2.43
LINC01239-201ENST00000433645 TRAV27A0A087WT01 109 aa-0.14□□□□□ -2.43
LINC01239-201ENST00000433645 B4DSR2 109 aa-0.14□□□□□ -2.43
LINC01239-201ENST00000433645 C5orf67F2Z3F1 127 aa-0.14□□□□□ -2.43
LINC01239-201ENST00000433645 PPYP01298 95 aa-0.14□□□□□ -2.43
LINC01239-201ENST00000433645 ERP29P30040 261 aaKnown RBP-0.14□□□□□ -2.43
LINC01239-201ENST00000433645 LSM6P62312 80 aaKnown RBP-0.14□□□□□ -2.43
LINC01239-201ENST00000433645 UBE2BP63146 152 aa-0.14□□□□□ -2.43
LINC01239-201ENST00000433645 AESQ08117 197 aa-0.14□□□□□ -2.43
LINC01239-201ENST00000433645 RGS21Q2M5E4 152 aa-0.14□□□□□ -2.43
LINC01239-201ENST00000433645 SPRR2GQ9BYE4 73 aa-0.14□□□□□ -2.43
LINC01239-201ENST00000433645 UCK1Q9HA47 277 aa-0.14□□□□□ -2.43
LINC01239-201ENST00000433645 COL24A1Q17RW2 1714 aa-0.14□□□□□ -2.43
LINC01239-201ENST00000433645 ERBINQ96RT1 1412 aa-0.14□□□□□ -2.43
LINC01239-201ENST00000433645 ADCY9O60503 1353 aa-0.15□□□□□ -2.43
LINC01239-201ENST00000433645 TCRBP04435 133 aa-0.15□□□□□ -2.43
LINC01239-201ENST00000433645 HLA-EP13747 358 aa-0.15□□□□□ -2.43
LINC01239-201ENST00000433645 VBP1P61758 197 aa-0.15□□□□□ -2.43
LINC01239-201ENST00000433645 OTUD6BQ8N6M0 293 aa-0.15□□□□□ -2.43
LINC01239-201ENST00000433645 TCEAL2Q9H3H9 227 aaPredicted RBP-0.15□□□□□ -2.43
LINC01239-201ENST00000433645 CCDC144AA2RUR9 1427 aa-0.15□□□□□ -2.43
LINC01239-201ENST00000433645 M0R233 179 aa-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 TAX1BP3O14907 124 aa-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 NIPSNAP2O75323 286 aa-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 IGLV1-51P01701 117 aa-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 RPS17P08708 135 aaKnown RBP-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 RAB5CP51148 216 aa-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 C1orf134Q5TEV5 83 aa-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 EIF5AL1Q6IS14 154 aaKnown RBP-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 ARPINQ7Z6K5 226 aa-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 OR8J2Q8NGG1 315 aa-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 OR5D16Q8NGK9 328 aa-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 RAB37Q96AX2 223 aa-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 BTF3L4Q96K17 158 aa-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 ARL5BQ96KC2 179 aa-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 LRP1Q07954 4544 aaKnown RBP-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 TRPM1Q7Z4N2 1603 aa-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 IGF2RP11717 2491 aa-0.16□□□□□ -2.44
LINC01239-201ENST00000433645 PTPRDP23468 1912 aa-0.17□□□□□ -2.44
LINC01239-201ENST00000433645 FAM159BA6NKW6 160 aa-0.17□□□□□ -2.44
LINC01239-201ENST00000433645 ZNF727A8MUV8 499 aa-0.17□□□□□ -2.44
LINC01239-201ENST00000433645 MGAMO43451 1857 aa-0.17□□□□□ -2.44
LINC01239-201ENST00000433645 IFNA7P01567 189 aa-0.17□□□□□ -2.44
LINC01239-201ENST00000433645 ATP5G3P48201 142 aa-0.17□□□□□ -2.44
LINC01239-201ENST00000433645 CCL7P80098 99 aa-0.17□□□□□ -2.44
LINC01239-201ENST00000433645 QRFPP83859 136 aa-0.17□□□□□ -2.44
LINC01239-201ENST00000433645 Q6ZQY7 126 aa-0.17□□□□□ -2.44
LINC01239-201ENST00000433645 POP5Q969H6 163 aaKnown RBP-0.17□□□□□ -2.44
LINC01239-201ENST00000433645 NMNAT1Q9HAN9 279 aaPredicted RBP-0.17□□□□□ -2.44
LINC01239-201ENST00000433645 DOCK4Q8N1I0 1966 aa-0.17□□□□□ -2.44
LINC01239-201ENST00000433645 NUPR2A6NF83 97 aa-0.18□□□□□ -2.44
LINC01239-201ENST00000433645 LYPLA2O95372 231 aa-0.18□□□□□ -2.44
LINC01239-201ENST00000433645 DEFA3P59666 94 aa-0.18□□□□□ -2.44
LINC01239-201ENST00000433645 PATE2Q6UY27 113 aa-0.18□□□□□ -2.44
LINC01239-201ENST00000433645 PLAC4Q8WY50 150 aa-0.18□□□□□ -2.44
LINC01239-201ENST00000433645 GGACTQ9BVM4 153 aa-0.18□□□□□ -2.44
LINC01239-201ENST00000433645 KIFC1Q9BW19 673 aa-0.18□□□□□ -2.44
LINC01239-201ENST00000433645 NPCDR1Q9BY65 106 aa-0.18□□□□□ -2.44
LINC01239-201ENST00000433645 SLC22A13Q9Y226 551 aa-0.18□□□□□ -2.44
LINC01239-201ENST00000433645 PIEZO1Q92508 2521 aa-0.18□□□□□ -2.44
LINC01239-201ENST00000433645 OTOGQ6ZRI0 2925 aa-0.18□□□□□ -2.44
LINC01239-201ENST00000433645 MYO5AQ9Y4I1 1855 aaKnown RBP-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms