RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 CRISP2P16562 243 aa10.91□□□□□ -0.66
HOXC4-202ENST00000430889 BRS3P32247 399 aa10.91□□□□□ -0.66
HOXC4-202ENST00000430889 C16orf54Q6UWD8 224 aa10.91□□□□□ -0.66
HOXC4-202ENST00000430889 EXOC3-AS1Q8N2X6 119 aa10.91□□□□□ -0.66
HOXC4-202ENST00000430889 NUP35Q8NFH5 326 aa10.91□□□□□ -0.66
HOXC4-202ENST00000430889 SGK494Q96LW2 274 aa10.91□□□□□ -0.66
HOXC4-202ENST00000430889 TXN2Q99757 166 aa10.91□□□□□ -0.66
HOXC4-202ENST00000430889 EPG5Q9HCE0 2579 aa10.91□□□□□ -0.66
HOXC4-202ENST00000430889 CFAP46Q8IYW2 2715 aa10.9□□□□□ -0.66
HOXC4-202ENST00000430889 A0A1B0GXF2 115 aa10.9□□□□□ -0.66
HOXC4-202ENST00000430889 OR2J3O76001 311 aa10.9□□□□□ -0.66
HOXC4-202ENST00000430889 CTSGP08311 255 aa10.9□□□□□ -0.66
HOXC4-202ENST00000430889 SLC35B1P78383 322 aa10.9□□□□□ -0.66
HOXC4-202ENST00000430889 GDF5OSQ5U4N7 250 aa10.9□□□□□ -0.66
HOXC4-202ENST00000430889 MRPL54Q6P161 138 aaKnown RBP10.9□□□□□ -0.66
HOXC4-202ENST00000430889 VN1R17PQ8TDU5 208 aa10.9□□□□□ -0.66
HOXC4-202ENST00000430889 C10orf105Q8TEF2 133 aa10.9□□□□□ -0.66
HOXC4-202ENST00000430889 THYN1Q9P016 225 aa10.9□□□□□ -0.66
HOXC4-202ENST00000430889 NAT8BQ9UHF3 227 aa10.9□□□□□ -0.66
HOXC4-202ENST00000430889 RPH3ALQ9UNE2 315 aa10.9□□□□□ -0.66
HOXC4-202ENST00000430889 F2Z2F3 143 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 BMPR1BO00238 502 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 SPINK4O60575 86 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 PDE6HQ13956 83 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 PRR27Q6MZM9 219 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 Q71RC1 249 aaPredicted RBP10.89□□□□□ -0.67
HOXC4-202ENST00000430889 TMEM75Q8N9X5 138 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 OR4F17Q8NGA8 305 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 NEU1Q99519 415 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 RPP21Q9H633 154 aaKnown RBP10.89□□□□□ -0.67
HOXC4-202ENST00000430889 IGHV4-61A0A0C4DH41 118 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 ATP6V0E1O15342 81 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 SERF1AO75920 110 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 RAB4BP61018 213 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 Q56UQ5 140 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 CMTM2Q8TAZ6 248 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 ZNF502Q8TBZ5 544 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 GNB4Q9HAV0 340 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 FBXL7Q9UJT9 491 aa10.89□□□□□ -0.67
HOXC4-202ENST00000430889 AKAP6Q13023 2319 aa10.88□□□□□ -0.67
HOXC4-202ENST00000430889 CSMD1Q96PZ7 3565 aa10.88□□□□□ -0.67
HOXC4-202ENST00000430889 TRAV8-1A0A0A6YYK1 113 aa10.88□□□□□ -0.67
HOXC4-202ENST00000430889 RNF224P0DH78 156 aa10.88□□□□□ -0.67
HOXC4-202ENST00000430889 C19orf54Q5BKX5 351 aa10.88□□□□□ -0.67
HOXC4-202ENST00000430889 GOLT1AQ6ZVE7 132 aa10.88□□□□□ -0.67
HOXC4-202ENST00000430889 ATP5L2Q7Z4Y8 100 aa10.88□□□□□ -0.67
HOXC4-202ENST00000430889 S100A7AQ86SG5 101 aa10.88□□□□□ -0.67
HOXC4-202ENST00000430889 C5orf56Q8N8D9 126 aa10.88□□□□□ -0.67
HOXC4-202ENST00000430889 PIFOQ8TCI5 191 aa10.88□□□□□ -0.67
HOXC4-202ENST00000430889 HIGD1CA8MV81 97 aa10.87□□□□□ -0.67
HOXC4-202ENST00000430889 NDUFS8O00217 210 aa10.87□□□□□ -0.67
HOXC4-202ENST00000430889 SLAQ13239 276 aa10.87□□□□□ -0.67
HOXC4-202ENST00000430889 OR10J3Q5JRS4 329 aa10.87□□□□□ -0.67
HOXC4-202ENST00000430889 CCL19Q99731 98 aa10.87□□□□□ -0.67
HOXC4-202ENST00000430889 PIMREGQ9BSJ6 248 aa10.87□□□□□ -0.67
HOXC4-202ENST00000430889 GFRA4Q9GZZ7 299 aa10.87□□□□□ -0.67
HOXC4-202ENST00000430889 USP24Q9UPU5 2620 aa10.86□□□□□ -0.67
HOXC4-202ENST00000430889 IGHV1-69DA0A0B4J2H0 117 aa10.86□□□□□ -0.67
HOXC4-202ENST00000430889 OR2T8A6NH00 312 aa10.86□□□□□ -0.67
HOXC4-202ENST00000430889 IGHV1-69P01742 117 aa10.86□□□□□ -0.67
HOXC4-202ENST00000430889 IGHV3-23P01764 117 aa10.86□□□□□ -0.67
HOXC4-202ENST00000430889 CRIP2P52943 208 aaPredicted RBP10.86□□□□□ -0.67
HOXC4-202ENST00000430889 PKIAP61925 76 aa10.86□□□□□ -0.67
HOXC4-202ENST00000430889 PAFAH1B2P68402 229 aa10.86□□□□□ -0.67
HOXC4-202ENST00000430889 KIAA1644Q3SXP7 199 aa10.86□□□□□ -0.67
HOXC4-202ENST00000430889 GTSF1Q8WW33 167 aa10.86□□□□□ -0.67
HOXC4-202ENST00000430889 ZNF331Q9NQX6 463 aaPredicted RBP10.86□□□□□ -0.67
HOXC4-202ENST00000430889 IGSF10Q6WRI0 2623 aa10.86□□□□□ -0.67
HOXC4-202ENST00000430889 FAM231BA6NCW3 169 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 LINC01548A6NM66 108 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 A8MWL6 223 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 DIRC3C9JPN6 131 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 APCSP02743 223 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 UNQ5815/PRO19632Q6UWF5 114 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 CIARTQ8N365 385 aaPredicted RBP10.85□□□□□ -0.67
HOXC4-202ENST00000430889 ARL6IP6Q8N6S5 226 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 OR4B1Q8NGF8 309 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 ZFAND3Q9H8U3 227 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 P01737 135 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 TPPP2P59282 170 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 PSG3Q16557 428 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 Q6ZWC4 215 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 CCDC140Q96MF4 163 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 SPOCK3Q9BQ16 436 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 MEGF9Q9H1U4 602 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 ZFP30Q9Y2G7 519 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 SOX21Q9Y651 276 aaPredicted RBP10.85□□□□□ -0.67
HOXC4-202ENST00000430889 SMAD5-AS1Q9Y6J3 95 aa10.85□□□□□ -0.67
HOXC4-202ENST00000430889 CACNA1BQ00975 2339 aa10.84□□□□□ -0.67
HOXC4-202ENST00000430889 DOPEY1Q5JWR5 2465 aa10.84□□□□□ -0.67
HOXC4-202ENST00000430889 ZNF253O75346 499 aa10.84□□□□□ -0.67
HOXC4-202ENST00000430889 SCGB2A1O75556 95 aa10.84□□□□□ -0.67
HOXC4-202ENST00000430889 SRIP30626 198 aa10.84□□□□□ -0.67
HOXC4-202ENST00000430889 RHOGP84095 191 aa10.84□□□□□ -0.67
HOXC4-202ENST00000430889 ECSCRQ19T08 205 aa10.84□□□□□ -0.67
HOXC4-202ENST00000430889 C15orf32Q32M92 178 aa10.84□□□□□ -0.67
HOXC4-202ENST00000430889 C9orf152Q5JTZ5 239 aa10.84□□□□□ -0.67
HOXC4-202ENST00000430889 TCF24Q7RTU0 167 aa10.84□□□□□ -0.67
HOXC4-202ENST00000430889 PRNTQ86SH4 94 aa10.84□□□□□ -0.67
HOXC4-202ENST00000430889 ZC2HC1AQ96GY0 325 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms