RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 TMEM116Q8NCL8 245 aa12□□□□□ -0.49
CACTIN-203ENST00000429344 RPUSD1Q9UJJ7 312 aaKnown RBP12□□□□□ -0.49
CACTIN-203ENST00000429344 EPDR1Q9UM22 224 aa12□□□□□ -0.49
CACTIN-203ENST00000429344 EXOC3-AS1Q8N2X6 119 aa12□□□□□ -0.49
CACTIN-203ENST00000429344 ZNF257Q9Y2Q1 563 aa12□□□□□ -0.49
CACTIN-203ENST00000429344 TMEM178BH3BS89 294 aa12□□□□□ -0.49
CACTIN-203ENST00000429344 LHBP01229 141 aa12□□□□□ -0.49
CACTIN-203ENST00000429344 RUSC1-AS1Q66K80 236 aa11.99□□□□□ -0.49
CACTIN-203ENST00000429344 Q71RC1 249 aaPredicted RBP11.99□□□□□ -0.49
CACTIN-203ENST00000429344 OR8A1Q8NGG7 326 aa11.99□□□□□ -0.49
CACTIN-203ENST00000429344 MRPL32Q9BYC8 188 aaKnown RBP11.99□□□□□ -0.49
CACTIN-203ENST00000429344 LINC00312Q9Y6C7 94 aa11.99□□□□□ -0.49
CACTIN-203ENST00000429344 SPENQ96T58 3664 aaKnown RBP11.99□□□□□ -0.49
CACTIN-203ENST00000429344 A8MWL6 223 aa11.99□□□□□ -0.49
CACTIN-203ENST00000429344 HIVEP3Q5T1R4 2406 aa11.99□□□□□ -0.49
CACTIN-203ENST00000429344 B9A039 149 aa11.99□□□□□ -0.49
CACTIN-203ENST00000429344 SLC25A34Q6PIV7 304 aa11.99□□□□□ -0.49
CACTIN-203ENST00000429344 RITA1Q96K30 269 aa11.99□□□□□ -0.49
CACTIN-203ENST00000429344 RPP21Q9H633 154 aaKnown RBP11.99□□□□□ -0.49
CACTIN-203ENST00000429344 TMEM238C9JI98 176 aa11.98□□□□□ -0.49
CACTIN-203ENST00000429344 C3orf36Q3SXR2 165 aa11.98□□□□□ -0.49
CACTIN-203ENST00000429344 AMMECR1LQ6DCA0 310 aa11.98□□□□□ -0.49
CACTIN-203ENST00000429344 MRPL52Q86TS9 123 aaKnown RBP11.98□□□□□ -0.49
CACTIN-203ENST00000429344 TCRBV4S1A1TA0A5B7 111 aa11.98□□□□□ -0.49
CACTIN-203ENST00000429344 TMEM200BQ69YZ2 307 aa11.98□□□□□ -0.49
CACTIN-203ENST00000429344 WFDC3Q8IUB2 231 aa11.98□□□□□ -0.49
CACTIN-203ENST00000429344 ORAOV1Q8WV07 137 aa11.98□□□□□ -0.49
CACTIN-203ENST00000429344 SRSF12Q8WXF0 261 aaKnown RBP11.98□□□□□ -0.49
CACTIN-203ENST00000429344 PERPQ96FX8 193 aa11.98□□□□□ -0.49
CACTIN-203ENST00000429344 TIMD4Q96H15 378 aa11.98□□□□□ -0.49
CACTIN-203ENST00000429344 GPR82Q96P67 336 aa11.98□□□□□ -0.49
CACTIN-203ENST00000429344 TMEM191AQ9H0A3 160 aa11.98□□□□□ -0.49
CACTIN-203ENST00000429344 SLC25A48Q6ZT89 311 aaKnown RBP11.98□□□□□ -0.49
CACTIN-203ENST00000429344 PRSS3P2Q8NHM4 247 aa11.98□□□□□ -0.49
CACTIN-203ENST00000429344 FXYD5Q96DB9 178 aa11.98□□□□□ -0.49
CACTIN-203ENST00000429344 MAP1LC3CQ9BXW4 147 aa11.98□□□□□ -0.49
CACTIN-203ENST00000429344 MRPL27Q9P0M9 148 aaKnown RBP11.98□□□□□ -0.49
CACTIN-203ENST00000429344 IGHV2-26A0A0B4J1V2 119 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.97□□□□□ -0.49
CACTIN-203ENST00000429344 IGFBPL1Q8WX77 278 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 C19orf24Q9BVV8 132 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 IGHV1-24A0A0C4DH33 117 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 H0YJW9 148 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 CHRDL1Q9BU40 450 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 Q9H3A6 140 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 COL12A1Q99715 3063 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 USP9YO00507 2555 aaPredicted RBP11.97□□□□□ -0.49
CACTIN-203ENST00000429344 C2orf70A6NJV1 201 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 SYS1-DBNDD2H3BUS1 97 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 CNTFRP26992 372 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 CDKN1BP46527 198 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 TEX45Q8NA69 505 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 OR4C13Q8NGP0 309 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 FAM222BQ8WU58 562 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 TMUB1Q9BVT8 246 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 NDUFA4L2Q9NRX3 87 aa11.97□□□□□ -0.49
CACTIN-203ENST00000429344 HES1Q14469 280 aa11.96□□□□□ -0.49
CACTIN-203ENST00000429344 VMA21Q3ZAQ7 101 aa11.96□□□□□ -0.49
CACTIN-203ENST00000429344 GTF2H5Q6ZYL4 71 aa11.96□□□□□ -0.5
CACTIN-203ENST00000429344 OSR1Q8TAX0 266 aaPredicted RBP11.96□□□□□ -0.5
CACTIN-203ENST00000429344 RAB1BQ9H0U4 201 aa11.96□□□□□ -0.5
CACTIN-203ENST00000429344 MRPS16Q9Y3D3 137 aaKnown RBP11.96□□□□□ -0.5
CACTIN-203ENST00000429344 A0A1W2PPI3 338 aa11.96□□□□□ -0.5
CACTIN-203ENST00000429344 CGB3P0DN86 165 aa11.96□□□□□ -0.5
CACTIN-203ENST00000429344 CGB7P0DN87 165 aa11.96□□□□□ -0.5
CACTIN-203ENST00000429344 GTSF1Q8WW33 167 aa11.96□□□□□ -0.5
CACTIN-203ENST00000429344 CACNG8Q8WXS5 425 aa11.96□□□□□ -0.5
CACTIN-203ENST00000429344 RAB37Q96AX2 223 aa11.96□□□□□ -0.5
CACTIN-203ENST00000429344 MYO9AB2RTY4 2548 aa11.95□□□□□ -0.5
CACTIN-203ENST00000429344 IGLC7A0M8Q6 106 aa11.95□□□□□ -0.5
CACTIN-203ENST00000429344 SHISA9B4DS77 424 aa11.95□□□□□ -0.5
CACTIN-203ENST00000429344 CST9LQ9H4G1 147 aa11.95□□□□□ -0.5
CACTIN-203ENST00000429344 ABCA2Q9BZC7 2435 aa11.95□□□□□ -0.5
CACTIN-203ENST00000429344 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.95□□□□□ -0.5
CACTIN-203ENST00000429344 CNIH1O95406 144 aa11.95□□□□□ -0.5
CACTIN-203ENST00000429344 TM4SF20Q53R12 229 aa11.95□□□□□ -0.5
CACTIN-203ENST00000429344 OCIAD2Q56VL3 154 aa11.95□□□□□ -0.5
CACTIN-203ENST00000429344 FA2HQ7L5A8 372 aa11.95□□□□□ -0.5
CACTIN-203ENST00000429344 RPEQ96AT9 228 aa11.95□□□□□ -0.5
CACTIN-203ENST00000429344 APOHP02749 345 aaPredicted RBP11.94□□□□□ -0.5
CACTIN-203ENST00000429344 UBTD1Q9HAC8 227 aa11.94□□□□□ -0.5
CACTIN-203ENST00000429344 HILPDAQ9Y5L2 63 aa11.94□□□□□ -0.5
CACTIN-203ENST00000429344 OR5AL1P0C617 328 aa11.94□□□□□ -0.5
CACTIN-203ENST00000429344 MBD6Q96DN6 1003 aa11.94□□□□□ -0.5
CACTIN-203ENST00000429344 C22orf46C9J442 243 aa11.94□□□□□ -0.5
CACTIN-203ENST00000429344 ARF6P62330 175 aa11.94□□□□□ -0.5
CACTIN-203ENST00000429344 MEF2CQ06413 473 aaPredicted RBP11.94□□□□□ -0.5
CACTIN-203ENST00000429344 INSIG2Q9Y5U4 225 aa11.94□□□□□ -0.5
CACTIN-203ENST00000429344 LOC105371242A0A075B767 164 aa11.93□□□□□ -0.5
CACTIN-203ENST00000429344 IGHV3OR16-8A0A075B7F1 116 aa11.93□□□□□ -0.5
CACTIN-203ENST00000429344 VSTM2AQ8TAG5 236 aa11.93□□□□□ -0.5
CACTIN-203ENST00000429344 GAGE10A6NGK3 116 aa11.93□□□□□ -0.5
CACTIN-203ENST00000429344 URB1-AS1Q96HZ7 61 aa11.93□□□□□ -0.5
CACTIN-203ENST00000429344 PKD1L2Q7Z442 2459 aa11.93□□□□□ -0.5
CACTIN-203ENST00000429344 PPIAL4CA0A0B4J2A2 164 aa11.93□□□□□ -0.5
CACTIN-203ENST00000429344 PPIAL4GP0DN37 164 aa11.93□□□□□ -0.5
CACTIN-203ENST00000429344 RPL27AP46776 148 aaKnown RBP11.93□□□□□ -0.5
CACTIN-203ENST00000429344 SMAGPQ0VAQ4 97 aa11.93□□□□□ -0.5
CACTIN-203ENST00000429344 OR4F17Q8NGA8 305 aa11.93□□□□□ -0.5
CACTIN-203ENST00000429344 CTSZQ9UBR2 303 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms