RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 SFTA3P0C7M3 94 aa11.8□□□□□ -0.52
CLK3P2-201ENST00000427566 Q8N1Y9 231 aa11.8□□□□□ -0.52
CLK3P2-201ENST00000427566 ZNF709Q8N972 641 aa11.8□□□□□ -0.52
CLK3P2-201ENST00000427566 EIF5A2Q9GZV4 153 aaKnown RBP11.8□□□□□ -0.52
CLK3P2-201ENST00000427566 IGHV7-4-1A0A0J9YVY3 117 aa11.79□□□□□ -0.52
CLK3P2-201ENST00000427566 ZNF785A8K8V0 405 aa11.79□□□□□ -0.52
CLK3P2-201ENST00000427566 SNAPINO95295 136 aa11.79□□□□□ -0.52
CLK3P2-201ENST00000427566 IGHV4-30-4P0DP06 118 aa11.79□□□□□ -0.52
CLK3P2-201ENST00000427566 CD81P60033 236 aa11.79□□□□□ -0.52
CLK3P2-201ENST00000427566 YPEL3P61236 119 aaPredicted RBP11.79□□□□□ -0.52
CLK3P2-201ENST00000427566 TMEM61Q8N0U2 210 aa11.79□□□□□ -0.52
CLK3P2-201ENST00000427566 SUN5Q8TC36 379 aa11.79□□□□□ -0.52
CLK3P2-201ENST00000427566 SFT2D1Q8WV19 159 aa11.79□□□□□ -0.52
CLK3P2-201ENST00000427566 NPCDR1Q9BY65 106 aa11.79□□□□□ -0.52
CLK3P2-201ENST00000427566 NKX6-2Q9C056 277 aaPredicted RBP11.79□□□□□ -0.52
CLK3P2-201ENST00000427566 SMPXQ9UHP9 88 aa11.79□□□□□ -0.52
CLK3P2-201ENST00000427566 IGHV3-66A0A0C4DH42 116 aa11.78□□□□□ -0.52
CLK3P2-201ENST00000427566 RBFOX3A6NFN3 312 aa11.78□□□□□ -0.52
CLK3P2-201ENST00000427566 ZFP92A6NM28 416 aa11.78□□□□□ -0.52
CLK3P2-201ENST00000427566 NHLRC4P0CG21 123 aaPredicted RBP11.78□□□□□ -0.52
CLK3P2-201ENST00000427566 PSG1P11464 419 aa11.78□□□□□ -0.52
CLK3P2-201ENST00000427566 SBSPONQ8IVN8 264 aa11.78□□□□□ -0.52
CLK3P2-201ENST00000427566 RHPN1-AS1Q9BWJ2 59 aa11.78□□□□□ -0.52
CLK3P2-201ENST00000427566 TUBA4BQ9H853 241 aa11.78□□□□□ -0.52
CLK3P2-201ENST00000427566 SMCO3A2RU48 225 aa11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 C9JQL5 133 aa11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 CHEK1O14757 476 aa11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 TOMM40O96008 361 aa11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 IL4P05112 153 aa11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 RD3LP0DJH9 198 aa11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 CCL20P78556 96 aa11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 PMS2P11Q13670 270 aa11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 USF2Q15853 346 aaPredicted RBP11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 ATRAIDQ6UW56 229 aa11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 RBPMS2Q6ZRY4 209 aaKnown RBP11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 THAP8Q8NA92 274 aa11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 Q8WTZ3 238 aa11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 RNF2Q99496 336 aa11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 SLC35B3Q9H1N7 401 aa11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 VSIRQ9H7M9 311 aa11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 KCNIP2Q9NS61 270 aa11.77□□□□□ -0.52
CLK3P2-201ENST00000427566 SCGB2A1O75556 95 aa11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 CD7P09564 240 aa11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 GATA2P23769 480 aaPredicted RBP11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 PPT1P50897 306 aa11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 BTN1A1Q13410 526 aa11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 ZNF726P1Q15940 193 aa11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 KHDC3LQ587J8 217 aa11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 ZNF506Q5JVG8 444 aa11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 TRGV9Q99603 122 aa11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 NPVFQ9HCQ7 196 aa11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 U3KQK5 164 aa11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 CTXND1A0A1B0GTU2 59 aa11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 A0A1B0GV50 99 aa11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 ACOT6Q3I5F7 207 aaPredicted RBP11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 FFAR4Q5NUL3 377 aa11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 TMEM144Q7Z5S9 345 aa11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 OR51G1Q8NGK1 321 aa11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 SLC39A9Q9NUM3 307 aa11.76□□□□□ -0.53
CLK3P2-201ENST00000427566 COL7A1Q02388 2944 aa11.75□□□□□ -0.53
CLK3P2-201ENST00000427566 MAP1LC3B2A6NCE7 125 aa11.75□□□□□ -0.53
CLK3P2-201ENST00000427566 NPPCP23582 126 aa11.75□□□□□ -0.53
CLK3P2-201ENST00000427566 CRYBB3P26998 211 aa11.75□□□□□ -0.53
CLK3P2-201ENST00000427566 RPP25LQ8N5L8 163 aaKnown RBP11.75□□□□□ -0.53
CLK3P2-201ENST00000427566 OR10G4Q8NGN3 311 aa11.75□□□□□ -0.53
CLK3P2-201ENST00000427566 OR10G9Q8NGN4 311 aa11.75□□□□□ -0.53
CLK3P2-201ENST00000427566 OR10G7Q8NGN6 311 aa11.75□□□□□ -0.53
CLK3P2-201ENST00000427566 ACTR3CQ9C0K3 210 aaPredicted RBP11.75□□□□□ -0.53
CLK3P2-201ENST00000427566 MAP1LC3BQ9GZQ8 125 aa11.75□□□□□ -0.53
CLK3P2-201ENST00000427566 WFDC10AQ9H1F0 79 aa11.75□□□□□ -0.53
CLK3P2-201ENST00000427566 IGKV3-7A0A075B6H7 116 aa11.74□□□□□ -0.53
CLK3P2-201ENST00000427566 IFNA1P01562 189 aa11.74□□□□□ -0.53
CLK3P2-201ENST00000427566 LCN15Q6UWW0 184 aa11.74□□□□□ -0.53
CLK3P2-201ENST00000427566 DEFB125Q8N687 156 aa11.74□□□□□ -0.53
CLK3P2-201ENST00000427566 STPG3Q8N7X2 389 aa11.74□□□□□ -0.53
CLK3P2-201ENST00000427566 RNF125Q96EQ8 232 aa11.74□□□□□ -0.53
CLK3P2-201ENST00000427566 METTL26Q96S19 204 aa11.74□□□□□ -0.53
CLK3P2-201ENST00000427566 ZMAT4Q9H898 229 aa11.74□□□□□ -0.53
CLK3P2-201ENST00000427566 C19orf73Q9NVV2 129 aa11.74□□□□□ -0.53
CLK3P2-201ENST00000427566 LOC102723971A0A1B0GUV8 181 aa11.73□□□□□ -0.53
CLK3P2-201ENST00000427566 OR11H12B2RN74 326 aa11.73□□□□□ -0.53
CLK3P2-201ENST00000427566 DNASE2O00115 360 aaPredicted RBP11.73□□□□□ -0.53
CLK3P2-201ENST00000427566 NDUFS6O75380 124 aaKnown RBP11.73□□□□□ -0.53
CLK3P2-201ENST00000427566 TAGLN2P37802 199 aaKnown RBP11.73□□□□□ -0.53
CLK3P2-201ENST00000427566 LYZP61626 148 aa11.73□□□□□ -0.53
CLK3P2-201ENST00000427566 RAB31Q13636 194 aa11.73□□□□□ -0.53
CLK3P2-201ENST00000427566 ICAM4Q14773 271 aa11.73□□□□□ -0.53
CLK3P2-201ENST00000427566 HAGHQ16775 308 aa11.73□□□□□ -0.53
CLK3P2-201ENST00000427566 FAM90A2PQ658T7 463 aa11.73□□□□□ -0.53
CLK3P2-201ENST00000427566 TEPPQ6URK8 271 aa11.73□□□□□ -0.53
CLK3P2-201ENST00000427566 CLRN3Q8NCR9 226 aa11.73□□□□□ -0.53
CLK3P2-201ENST00000427566 RARRES2Q99969 163 aa11.73□□□□□ -0.53
CLK3P2-201ENST00000427566 GGTLC1Q9BX51 225 aa11.73□□□□□ -0.53
CLK3P2-201ENST00000427566 U3KQE9 123 aa11.73□□□□□ -0.53
CLK3P2-201ENST00000427566 TRAV25A0A0B4J276 109 aa11.72□□□□□ -0.53
CLK3P2-201ENST00000427566 SRP19P09132 144 aaKnown RBP11.72□□□□□ -0.53
CLK3P2-201ENST00000427566 BCL2P10415 239 aa11.72□□□□□ -0.53
CLK3P2-201ENST00000427566 SSX7Q7RTT5 188 aa11.72□□□□□ -0.53
CLK3P2-201ENST00000427566 TCF24Q7RTU0 167 aa11.72□□□□□ -0.53
CLK3P2-201ENST00000427566 MGST2Q99735 147 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms