RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 FNDC4Q9H6D8 234 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-205ENST00000425443 NRN1Q9NPD7 142 aa10.43□□□□□ -0.74
COL12A1-205ENST00000425443 UFC1Q9Y3C8 167 aa10.43□□□□□ -0.74
COL12A1-205ENST00000425443 C8orf88P0DMB2 117 aa10.43□□□□□ -0.74
COL12A1-205ENST00000425443 IGLC2P0DOY2 106 aa10.43□□□□□ -0.74
COL12A1-205ENST00000425443 IGLC3P0DOY3 106 aa10.43□□□□□ -0.74
COL12A1-205ENST00000425443 PSG9Q00887 426 aa10.43□□□□□ -0.74
COL12A1-205ENST00000425443 GDF5OSQ5U4N7 250 aa10.43□□□□□ -0.74
COL12A1-205ENST00000425443 TMEM167AQ8TBQ9 72 aa10.43□□□□□ -0.74
COL12A1-205ENST00000425443 IGFBPL1Q8WX77 278 aa10.43□□□□□ -0.74
COL12A1-205ENST00000425443 VKORC1Q9BQB6 163 aa10.43□□□□□ -0.74
COL12A1-205ENST00000425443 SLC25A33Q9BSK2 321 aa10.43□□□□□ -0.74
COL12A1-205ENST00000425443 CDC42EP3Q9UKI2 254 aa10.43□□□□□ -0.74
COL12A1-205ENST00000425443 MAP1AP78559 2803 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-205ENST00000425443 TSPOP30536 169 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 AMTP48728 403 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 CAMPP49913 170 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 CGB1A6NKQ9 187 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 ZNF253O75346 499 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 SCGB2A1O75556 95 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 SIGLECL1Q8N7X8 197 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 OR4A5Q8NH83 315 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 TMEM133Q9H2Q1 129 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 SMIM27A0A1W2PRY6 76 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 B5MCH6 92 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 COX7A1P24310 79 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 RPS20P60866 119 aaKnown RBP10.42□□□□□ -0.74
COL12A1-205ENST00000425443 TNXAQ16473 311 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 TMEM155Q4W5P6 130 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 ZNF841Q6ZN19 808 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 MUC15Q8N387 334 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 VCX2Q9H322 139 aa10.42□□□□□ -0.74
COL12A1-205ENST00000425443 RALYQ9UKM9 306 aaKnown RBP10.42□□□□□ -0.74
COL12A1-205ENST00000425443 DIRC3C9JPN6 131 aa10.41□□□□□ -0.74
COL12A1-205ENST00000425443 CTRLP40313 264 aa10.41□□□□□ -0.74
COL12A1-205ENST00000425443 GPR6P46095 362 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-205ENST00000425443 RPL32P62910 135 aaKnown RBP10.41□□□□□ -0.74
COL12A1-205ENST00000425443 FAM71F2Q6NXP2 309 aa10.41□□□□□ -0.74
COL12A1-205ENST00000425443 PATE2Q6UY27 113 aa10.41□□□□□ -0.74
COL12A1-205ENST00000425443 SSBP4Q9BWG4 385 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-205ENST00000425443 OSTCQ9NRP0 149 aa10.41□□□□□ -0.74
COL12A1-205ENST00000425443 INSIG2Q9Y5U4 225 aa10.41□□□□□ -0.74
COL12A1-205ENST00000425443 H0Y8G0 127 aa10.41□□□□□ -0.74
COL12A1-205ENST00000425443 ISLRO14498 428 aa10.41□□□□□ -0.74
COL12A1-205ENST00000425443 CNTFRP26992 372 aa10.41□□□□□ -0.74
COL12A1-205ENST00000425443 C10orf113Q5VZT2 155 aa10.41□□□□□ -0.74
COL12A1-205ENST00000425443 PAXXQ9BUH6 204 aa10.41□□□□□ -0.74
COL12A1-205ENST00000425443 KAAG1Q9UBP8 84 aa10.41□□□□□ -0.74
COL12A1-205ENST00000425443 AMMECR1Q9Y4X0 333 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-205ENST00000425443 CCL21O00585 134 aa10.4□□□□□ -0.74
COL12A1-205ENST00000425443 TAX1BP3O14907 124 aa10.4□□□□□ -0.74
COL12A1-205ENST00000425443 PSG3Q16557 428 aa10.4□□□□□ -0.74
COL12A1-205ENST00000425443 LINC00311Q8N616 119 aa10.4□□□□□ -0.74
COL12A1-205ENST00000425443 OR4B1Q8NGF8 309 aa10.4□□□□□ -0.74
COL12A1-205ENST00000425443 KCNS1Q96KK3 526 aa10.4□□□□□ -0.74
COL12A1-205ENST00000425443 TRAV8-6A0A0B4J262 113 aa10.4□□□□□ -0.74
COL12A1-205ENST00000425443 GAGE10A6NGK3 116 aa10.4□□□□□ -0.74
COL12A1-205ENST00000425443 VWC2LB2RUY7 222 aa10.4□□□□□ -0.74
COL12A1-205ENST00000425443 PLGLAQ15195 96 aa10.4□□□□□ -0.74
COL12A1-205ENST00000425443 LINC00305Q7Z4B0 112 aa10.4□□□□□ -0.74
COL12A1-205ENST00000425443 TSKUQ8WUA8 353 aa10.4□□□□□ -0.74
COL12A1-205ENST00000425443 DAZAP1Q96EP5 407 aaKnown RBP10.4□□□□□ -0.74
COL12A1-205ENST00000425443 CHRDL1Q9BU40 450 aa10.4□□□□□ -0.74
COL12A1-205ENST00000425443 C3orf79P0CE67 100 aa10.4□□□□□ -0.75
COL12A1-205ENST00000425443 CD24P25063 80 aa10.4□□□□□ -0.75
COL12A1-205ENST00000425443 OR1L4Q8NGR5 311 aa10.4□□□□□ -0.75
COL12A1-205ENST00000425443 NCOR2Q9Y618 2525 aa10.39□□□□□ -0.75
COL12A1-205ENST00000425443 IGKV1D-37A0A075B6S9 117 aa10.39□□□□□ -0.75
COL12A1-205ENST00000425443 TRBV9A0A0B4J1U6 114 aa10.39□□□□□ -0.75
COL12A1-205ENST00000425443 FSTL3O95633 263 aa10.39□□□□□ -0.75
COL12A1-205ENST00000425443 TSPAN13O95857 204 aa10.39□□□□□ -0.75
COL12A1-205ENST00000425443 AMY1AP04745 511 aa10.39□□□□□ -0.75
COL12A1-205ENST00000425443 MFAP2P55001 183 aa10.39□□□□□ -0.75
COL12A1-205ENST00000425443 TCTAP57738 103 aa10.39□□□□□ -0.75
COL12A1-205ENST00000425443 ASCL2Q99929 193 aa10.39□□□□□ -0.75
COL12A1-205ENST00000425443 MRPL32Q9BYC8 188 aaKnown RBP10.39□□□□□ -0.75
COL12A1-205ENST00000425443 TSSC4Q9Y5U2 329 aaPredicted RBP10.39□□□□□ -0.75
COL12A1-205ENST00000425443 CHD8Q9HCK8 2581 aa10.39□□□□□ -0.75
COL12A1-205ENST00000425443 IGHV2-26A0A0B4J1V2 119 aa10.39□□□□□ -0.75
COL12A1-205ENST00000425443 TNFRSF13BO14836 293 aaPredicted RBP10.39□□□□□ -0.75
COL12A1-205ENST00000425443 GRNP28799 593 aaKnown RBP10.39□□□□□ -0.75
COL12A1-205ENST00000425443 OR10J3Q5JRS4 329 aa10.39□□□□□ -0.75
COL12A1-205ENST00000425443 RPEQ96AT9 228 aa10.39□□□□□ -0.75
COL12A1-205ENST00000425443 MRAP2Q96G30 205 aa10.39□□□□□ -0.75
COL12A1-205ENST00000425443 MCRIP2Q9BUT9 160 aaKnown RBP10.39□□□□□ -0.75
COL12A1-205ENST00000425443 RAB1BQ9H0U4 201 aa10.39□□□□□ -0.75
COL12A1-205ENST00000425443 ARL2-SNX15V9GYD0 113 aa10.39□□□□□ -0.75
COL12A1-205ENST00000425443 A0A1W2PPI3 338 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 ZNF324O75467 553 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-205ENST00000425443 IGLV2-23P01705 113 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 RPL27AP46776 148 aaKnown RBP10.38□□□□□ -0.75
COL12A1-205ENST00000425443 MPV17L2Q567V2 206 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 KIR3DL3Q8N743 410 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 C8orf31Q8N9H6 132 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 ONECUT1Q9UBC0 465 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 A0A1W2PRE2 83 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 IGLC7A0M8Q6 106 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 TGFAP01135 160 aa10.38□□□□□ -0.75
COL12A1-205ENST00000425443 SLC25A5P05141 298 aaKnown RBP10.38□□□□□ -0.75
COL12A1-205ENST00000425443 Q71RC1 249 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms