RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 CITED2Q99967 270 aaPredicted RBP12.12□□□□□ -0.47
SHOX2-202ENST00000425436 HIGD1AQ9Y241 93 aa12.12□□□□□ -0.47
SHOX2-202ENST00000425436 ANK2Q01484 3957 aa12.12□□□□□ -0.47
SHOX2-202ENST00000425436 LOC105371267A0A1B0GV96 52 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 C1orf196B1AJZ1 125 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 TGOLN2O43493 480 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 TOMM40O96008 361 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 RAB5AP20339 215 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 FCGR2BP31994 310 aaPredicted RBP12.11□□□□□ -0.47
SHOX2-202ENST00000425436 CRIP2P52943 208 aaPredicted RBP12.11□□□□□ -0.47
SHOX2-202ENST00000425436 C19orf54Q5BKX5 351 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 TEX38Q6PEX7 206 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 C19orf35Q6ZS72 473 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 FAM110DQ8TAY7 271 aaPredicted RBP12.11□□□□□ -0.47
SHOX2-202ENST00000425436 VN1R17PQ8TDU5 208 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 ISOC2Q96AB3 205 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 GAR1Q9NY12 217 aaKnown RBP12.11□□□□□ -0.47
SHOX2-202ENST00000425436 IGHV3-21A0A0B4J1V1 117 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 C9JCJ5 164 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 GNG7O60262 68 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 PSG1P11464 419 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 RAB5BP61020 215 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 SHISA2Q6UWI4 295 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 OR4X2Q8NGF9 303 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 YPEL4Q96NS1 127 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 KLK15Q9H2R5 256 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 C21orf62Q9NYP8 219 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 ZNF580Q9UK33 172 aa12.11□□□□□ -0.47
SHOX2-202ENST00000425436 A0A1W2PRX2 142 aa12.1□□□□□ -0.47
SHOX2-202ENST00000425436 IGKV1-17P01599 117 aa12.1□□□□□ -0.47
SHOX2-202ENST00000425436 IGHG4P01861 327 aa12.1□□□□□ -0.47
SHOX2-202ENST00000425436 RPLP1P05386 114 aaKnown RBP12.1□□□□□ -0.47
SHOX2-202ENST00000425436 S100PP25815 95 aa12.1□□□□□ -0.47
SHOX2-202ENST00000425436 KIAA0141Q14154 515 aaPredicted RBP12.1□□□□□ -0.47
SHOX2-202ENST00000425436 TIGITQ495A1 244 aa12.1□□□□□ -0.47
SHOX2-202ENST00000425436 Q8WTZ3 238 aa12.1□□□□□ -0.47
SHOX2-202ENST00000425436 BTF3L4Q96K17 158 aa12.1□□□□□ -0.47
SHOX2-202ENST00000425436 MS4A10Q96PG2 267 aa12.1□□□□□ -0.47
SHOX2-202ENST00000425436 OR5B12Q96R08 314 aa12.1□□□□□ -0.47
SHOX2-202ENST00000425436 MRPL27Q9P0M9 148 aaKnown RBP12.1□□□□□ -0.47
SHOX2-202ENST00000425436 TMEM14CQ9P0S9 112 aa12.1□□□□□ -0.47
SHOX2-202ENST00000425436 DNHD1Q96M86 4753 aa12.1□□□□□ -0.47
SHOX2-202ENST00000425436 TRAV5A0A0B4J249 113 aa12.09□□□□□ -0.47
SHOX2-202ENST00000425436 SCO2A0A1W2PP80 73 aa12.09□□□□□ -0.47
SHOX2-202ENST00000425436 HELTA6NFD8 242 aa12.09□□□□□ -0.47
SHOX2-202ENST00000425436 H7BYZ3 331 aa12.09□□□□□ -0.47
SHOX2-202ENST00000425436 IGLV1-40P01703 118 aa12.09□□□□□ -0.47
SHOX2-202ENST00000425436 OR10J4P0C629 311 aa12.09□□□□□ -0.47
SHOX2-202ENST00000425436 PF4V1P10720 104 aa12.09□□□□□ -0.47
SHOX2-202ENST00000425436 SUMO1P63165 101 aaKnown RBP12.09□□□□□ -0.47
SHOX2-202ENST00000425436 ELOBQ15370 118 aa12.09□□□□□ -0.47
SHOX2-202ENST00000425436 NSUN5P1Q3KNT7 163 aa12.09□□□□□ -0.47
SHOX2-202ENST00000425436 KHDC1LQ5JSQ8 128 aa12.09□□□□□ -0.47
SHOX2-202ENST00000425436 LINC01551Q86U37 167 aa12.09□□□□□ -0.47
SHOX2-202ENST00000425436 C1QL4Q86Z23 238 aa12.09□□□□□ -0.47
SHOX2-202ENST00000425436 PSMB8P28062 276 aa12.08□□□□□ -0.48
SHOX2-202ENST00000425436 LYZP61626 148 aa12.08□□□□□ -0.48
SHOX2-202ENST00000425436 FOXE3Q13461 319 aa12.08□□□□□ -0.48
SHOX2-202ENST00000425436 FXYD5Q96DB9 178 aa12.08□□□□□ -0.48
SHOX2-202ENST00000425436 IMMP2LQ96T52 175 aa12.08□□□□□ -0.48
SHOX2-202ENST00000425436 ATP6V0BQ99437 205 aa12.08□□□□□ -0.48
SHOX2-202ENST00000425436 RAB9AP51151 201 aa12.07□□□□□ -0.48
SHOX2-202ENST00000425436 TAS2R60P59551 318 aa12.07□□□□□ -0.48
SHOX2-202ENST00000425436 Q56UQ5 140 aa12.07□□□□□ -0.48
SHOX2-202ENST00000425436 MORN5Q5VZ52 161 aa12.07□□□□□ -0.48
SHOX2-202ENST00000425436 C18orf65Q6ZTR6 163 aa12.07□□□□□ -0.48
SHOX2-202ENST00000425436 FBXL7Q9UJT9 491 aa12.07□□□□□ -0.48
SHOX2-202ENST00000425436 TRBV24-1A0A075B6N3 115 aa12.06□□□□□ -0.48
SHOX2-202ENST00000425436 WI2-2373I1.2A0A1W2PRP0 233 aa12.06□□□□□ -0.48
SHOX2-202ENST00000425436 S100A9P06702 114 aaKnown RBP12.06□□□□□ -0.48
SHOX2-202ENST00000425436 ELANEP08246 267 aa12.06□□□□□ -0.48
SHOX2-202ENST00000425436 NBEAP1P0C6P0 100 aa12.06□□□□□ -0.48
SHOX2-202ENST00000425436 CRYBB3P26998 211 aa12.06□□□□□ -0.48
SHOX2-202ENST00000425436 NECAP1Q8NC96 275 aa12.06□□□□□ -0.48
SHOX2-202ENST00000425436 SLC25A39Q9BZJ4 359 aaPredicted RBP12.06□□□□□ -0.48
SHOX2-202ENST00000425436 TRBV9A0A0B4J1U6 114 aa12.06□□□□□ -0.48
SHOX2-202ENST00000425436 ADARB2-AS1A8MUL3 147 aa12.06□□□□□ -0.48
SHOX2-202ENST00000425436 GGTLC3B5MD39 225 aa12.06□□□□□ -0.48
SHOX2-202ENST00000425436 NDUFB8O95169 186 aa12.06□□□□□ -0.48
SHOX2-202ENST00000425436 HIST1H1EP10412 219 aaKnown RBP12.06□□□□□ -0.48
SHOX2-202ENST00000425436 RPL35P42766 123 aaKnown RBP12.06□□□□□ -0.48
SHOX2-202ENST00000425436 ZNF343Q6P1L6 599 aa12.06□□□□□ -0.48
SHOX2-202ENST00000425436 KCNIP4Q6PIL6 250 aa12.06□□□□□ -0.48
SHOX2-202ENST00000425436 ZNF491Q8N8L2 437 aa12.06□□□□□ -0.48
SHOX2-202ENST00000425436 RNF125Q96EQ8 232 aa12.06□□□□□ -0.48
SHOX2-202ENST00000425436 SHANK2-AS3Q9BTD1 123 aa12.06□□□□□ -0.48
SHOX2-202ENST00000425436 TSSC4Q9Y5U2 329 aaPredicted RBP12.06□□□□□ -0.48
SHOX2-202ENST00000425436 TRRAPQ9Y4A5 3859 aa12.05□□□□□ -0.48
SHOX2-202ENST00000425436 VWFP04275 2813 aa12.05□□□□□ -0.48
SHOX2-202ENST00000425436 OR2J3O76001 311 aa12.05□□□□□ -0.48
SHOX2-202ENST00000425436 BRI3O95415 125 aa12.05□□□□□ -0.48
SHOX2-202ENST00000425436 TRGV3P03979 118 aa12.05□□□□□ -0.48
SHOX2-202ENST00000425436 PYYP10082 97 aa12.05□□□□□ -0.48
SHOX2-202ENST00000425436 GNG4P50150 75 aa12.05□□□□□ -0.48
SHOX2-202ENST00000425436 TPPP2P59282 170 aa12.05□□□□□ -0.48
SHOX2-202ENST00000425436 BPIFA4PQ86YQ2 179 aa12.05□□□□□ -0.48
SHOX2-202ENST00000425436 RNF152Q8N8N0 203 aa12.05□□□□□ -0.48
SHOX2-202ENST00000425436 C2CD4CQ8TF44 421 aa12.05□□□□□ -0.48
SHOX2-202ENST00000425436 SFRP2Q96HF1 295 aa12.05□□□□□ -0.48
SHOX2-202ENST00000425436 FAM210BQ96KR6 192 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms