RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 LINC00032P0C843 101 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 CD24P25063 80 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 KRTAP5-9P26371 169 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 UBA52P62987 128 aaKnown RBP2.47□□□□□ -2.01
SF3B1-205ENST00000424674 KISS1Q15726 138 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 DPPA3Q6W0C5 159 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 RPRMLQ8N4K4 120 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 FAM216BQ8N7L0 139 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 PFN4Q8NHR9 129 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 LINC00526Q96FQ7 95 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 IMMP1LQ96LU5 166 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 AQP10Q96PS8 301 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 TTTY13Q9BZ97 58 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 NHP2Q9NX24 153 aaKnown RBP2.47□□□□□ -2.01
SF3B1-205ENST00000424674 FKBP11Q9NYL4 201 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 OR5V1Q9UGF6 321 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 ICOSQ9Y6W8 199 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 CRB1P82279 1406 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 TOPBP1Q92547 1522 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 PIK3C2AO00443 1686 aa2.47□□□□□ -2.01
SF3B1-205ENST00000424674 DENND4CQ5VZ89 1909 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 SBF1O95248 1867 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 NLRC5Q86WI3 1866 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 RRBP1Q9P2E9 1410 aaKnown RBP2.46□□□□□ -2.02
SF3B1-205ENST00000424674 IGKV3D-20A0A0C4DH25 116 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 C3orf85A0A1B0GTC6 90 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 TMEM262E9PQX1 116 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 H3BQF6 201 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 SDCBPO00560 298 aaPredicted RBP2.46□□□□□ -2.02
SF3B1-205ENST00000424674 ZNF705BP0CI00 300 aaPredicted RBP2.46□□□□□ -2.02
SF3B1-205ENST00000424674 FUSP35637 526 aaKnown RBP eCLIP2.46□□□□□ -2.02
SF3B1-205ENST00000424674 NOVP48745 357 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 EBI3Q14213 229 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 ZNF846Q147U1 533 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 PYY3Q5JQD4 70 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 CLLU1Q5K131 121 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 C9orf153Q5TBE3 101 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 ZC2HC1BQ5TFG8 222 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 SDIM1Q6ZPB5 146 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 ADM2Q7Z4H4 148 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 C3orf56Q8N813 242 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 SPANXA2-OT1Q8N9U9 137 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 OR4X2Q8NGF9 303 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 PKMYT1Q99640 499 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 LINC00467Q9BRT7 94 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 ZNF443Q9Y2A4 671 aaPredicted RBP2.46□□□□□ -2.02
SF3B1-205ENST00000424674 SERP1Q9Y6X1 66 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 U3KQK5 164 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 ATAD5Q96QE3 1844 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 DLC1Q96QB1 1528 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 DSCAML1Q8TD84 2053 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 ZNFX1Q9P2E3 1918 aaKnown RBP2.46□□□□□ -2.02
SF3B1-205ENST00000424674 PLXNB3Q9ULL4 1909 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 AKAP12Q02952 1782 aa2.46□□□□□ -2.02
SF3B1-205ENST00000424674 TET2Q6N021 2002 aaPredicted RBP2.46□□□□□ -2.02
SF3B1-205ENST00000424674 MAGI1Q96QZ7 1491 aaPredicted RBP2.45□□□□□ -2.02
SF3B1-205ENST00000424674 DOCK4Q8N1I0 1966 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 SMIM31A0A1B0GVY4 71 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 FAM168BA1KXE4 195 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 PINLYPA6NC86 204 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 C11orf94C9JXX5 98 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 LYRM1O43325 122 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 HYPMO75409 117 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 LHBP01229 141 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 IGLV1-47P01700 117 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 TRACP01848 142 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 CTSDP07339 412 aaPredicted RBP2.45□□□□□ -2.02
SF3B1-205ENST00000424674 SAA1P0DJI8 122 aaPredicted RBP2.45□□□□□ -2.02
SF3B1-205ENST00000424674 CRYGAP11844 174 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 COX6A1P12074 109 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 DYNLT1P63172 113 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 KLRD1Q13241 179 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 CDK5R1Q15078 307 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 C15orf32Q32M92 178 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 ASB16-AS1Q495Z4 193 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 KHDC3LQ587J8 217 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 LCE3CQ5T5A8 94 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 ZNF660Q6AZW8 331 aaPredicted RBP2.45□□□□□ -2.02
SF3B1-205ENST00000424674 PATE2Q6UY27 113 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 SOSTDC1Q6X4U4 206 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 Q6ZQT7 251 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 Q6ZUT4 128 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 DYNAPQ8N1N2 210 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 TYMSOSQ8TAI1 123 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 MUC7Q8TAX7 377 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 FGF13Q92913 245 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 TAS2R4Q9NYW5 299 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 LSM2Q9Y333 95 aaKnown RBP2.45□□□□□ -2.02
SF3B1-205ENST00000424674 ANKRD31Q8N7Z5 1873 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 CFTRP13569 1480 aa2.45□□□□□ -2.02
SF3B1-205ENST00000424674 BAZ1BQ9UIG0 1483 aaKnown RBP2.45□□□□□ -2.02
SF3B1-205ENST00000424674 TRGV5A0A0B4J1U4 118 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 IGHV3-15A0A0B4J1V0 119 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 IGKV6D-41A0A0C4DH26 115 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 A0A1B0GVY2 172 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 LOC107986453A0A1B0GWG9 222 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 A0A1W2PQD3 144 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 C19orf71A6NCJ1 209 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 ZNF736B4DX44 427 aaPredicted RBP2.44□□□□□ -2.02
SF3B1-205ENST00000424674 MCRIP1C9JLW8 97 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms