RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 FOXL1Q12952 345 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 TOMM20LQ6UXN7 152 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 PIP4P2Q8N4L2 257 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 NEU1Q99519 415 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 PAM16Q9Y3D7 125 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 PRRC2AP48634 2157 aaKnown RBP9.4□□□□□ -0.91
PTPRN-204ENST00000423636 TGOLN2O43493 480 aa9.39□□□□□ -0.91
PTPRN-204ENST00000423636 HOXB4P17483 251 aaPredicted RBP9.39□□□□□ -0.91
PTPRN-204ENST00000423636 GPR183P32249 361 aa9.39□□□□□ -0.91
PTPRN-204ENST00000423636 BTF3L4Q96K17 158 aa9.39□□□□□ -0.91
PTPRN-204ENST00000423636 ELOA3CA0A087WX78 387 aaPredicted RBP9.39□□□□□ -0.91
PTPRN-204ENST00000423636 A0A1W2PRE2 83 aa9.39□□□□□ -0.91
PTPRN-204ENST00000423636 DEFB1P60022 68 aa9.39□□□□□ -0.91
PTPRN-204ENST00000423636 C5orf64Q2M2E5 130 aa9.39□□□□□ -0.91
PTPRN-204ENST00000423636 BEND2Q8NDZ0 799 aa9.39□□□□□ -0.91
PTPRN-204ENST00000423636 NUP35Q8NFH5 326 aa9.39□□□□□ -0.91
PTPRN-204ENST00000423636 C11orf52Q96A22 123 aa9.39□□□□□ -0.91
PTPRN-204ENST00000423636 FXYD7P58549 80 aa9.39□□□□□ -0.91
PTPRN-204ENST00000423636 CYB5R2Q6BCY4 276 aa9.39□□□□□ -0.91
PTPRN-204ENST00000423636 GBGT1Q8N5D6 347 aa9.39□□□□□ -0.91
PTPRN-204ENST00000423636 TP73-AS1Q9UF72 201 aa9.39□□□□□ -0.91
PTPRN-204ENST00000423636 SPRY2O43597 315 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 LCN12Q6JVE5 192 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 Q6ZWC4 215 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 TMEM116Q8NCL8 245 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 OR4A5Q8NH83 315 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 TMEM18Q96B42 140 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 CDC42EP3Q9UKI2 254 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 IGKV2-40A0A087WW87 121 aaPredicted RBP9.38□□□□□ -0.91
PTPRN-204ENST00000423636 IGKV2D-40P01614 121 aaPredicted RBP9.38□□□□□ -0.91
PTPRN-204ENST00000423636 PRTN3P24158 256 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 TMEM75Q8N9X5 138 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 ARPC1AQ92747 370 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 C8orf49Q96NF6 230 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 TBX15Q96SF7 602 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 GP9P14770 177 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 BATFQ16520 125 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 TMEM30BQ3MIR4 351 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 FBXL19-AS1Q494R0 122 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 UNQ5815/PRO19632Q6UWF5 114 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 RNF182Q8N6D2 247 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 THAP8Q8NA92 274 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 FANCD2OSQ96PS1 177 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 ATG101Q9BSB4 218 aa9.38□□□□□ -0.91
PTPRN-204ENST00000423636 GCGP01275 180 aa9.37□□□□□ -0.91
PTPRN-204ENST00000423636 AMTP48728 403 aa9.37□□□□□ -0.91
PTPRN-204ENST00000423636 MAJINQ3KP22 176 aa9.37□□□□□ -0.91
PTPRN-204ENST00000423636 C8orf46Q8TAG6 207 aa9.37□□□□□ -0.91
PTPRN-204ENST00000423636 ZNF331Q9NQX6 463 aaPredicted RBP9.37□□□□□ -0.91
PTPRN-204ENST00000423636 TRAV40A0A0B4J280 105 aa9.37□□□□□ -0.91
PTPRN-204ENST00000423636 C9JCJ5 164 aa9.37□□□□□ -0.91
PTPRN-204ENST00000423636 IGHV3-11P01762 117 aa9.37□□□□□ -0.91
PTPRN-204ENST00000423636 PAX1P15863 534 aa9.37□□□□□ -0.91
PTPRN-204ENST00000423636 PPIFP30405 207 aaKnown RBP9.37□□□□□ -0.91
PTPRN-204ENST00000423636 LY6G5BQ8NDX9 201 aa9.37□□□□□ -0.91
PTPRN-204ENST00000423636 RNF125Q96EQ8 232 aa9.37□□□□□ -0.91
PTPRN-204ENST00000423636 MRPL32Q9BYC8 188 aaKnown RBP9.37□□□□□ -0.91
PTPRN-204ENST00000423636 BMPR1BO00238 502 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 ATP6V0E1O15342 81 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 IGHV4-39P01824 125 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 CRYGCP07315 174 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 SELENOTP62341 195 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 ETFRF1Q6IPR1 90 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 CLEC19AQ6UXS0 136 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 TMEM136Q6ZRR5 245 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 ZNF491Q8N8L2 437 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 FBXL7Q9UJT9 491 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 ITPR2Q14571 2701 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 IGHV4-61A0A0C4DH41 118 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 TCRAP04437 139 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 TYMSP04818 313 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 TMEM249Q2WGJ8 235 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 A0A1B0GV90 55 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 CLEC3BP05452 202 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 JOSD1Q15040 202 aaPredicted RBP9.36□□□□□ -0.91
PTPRN-204ENST00000423636 RNASEKQ6P5S7 137 aaKnown RBP9.36□□□□□ -0.91
PTPRN-204ENST00000423636 Q6ZQT7 251 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 Q6ZS46 218 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 GTSF1Q8WW33 167 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 DAZAP1Q96EP5 407 aaKnown RBP9.36□□□□□ -0.91
PTPRN-204ENST00000423636 TRGV9Q99603 122 aa9.36□□□□□ -0.91
PTPRN-204ENST00000423636 APOHP02749 345 aaPredicted RBP9.35□□□□□ -0.91
PTPRN-204ENST00000423636 CEACAM3P40198 252 aa9.35□□□□□ -0.91
PTPRN-204ENST00000423636 S100A12P80511 92 aa9.35□□□□□ -0.91
PTPRN-204ENST00000423636 C21orf62-AS1Q17RA5 79 aa9.35□□□□□ -0.91
PTPRN-204ENST00000423636 C15orf32Q32M92 178 aa9.35□□□□□ -0.91
PTPRN-204ENST00000423636 C14orf144Q96I85 54 aa9.35□□□□□ -0.91
PTPRN-204ENST00000423636 APCP25054 2843 aa9.35□□□□□ -0.91
PTPRN-204ENST00000423636 IGHV7-81A0A0B4J1V7 117 aa9.35□□□□□ -0.91
PTPRN-204ENST00000423636 APCSP02743 223 aa9.35□□□□□ -0.91
PTPRN-204ENST00000423636 IGHV4-38-2P0DP08 117 aa9.35□□□□□ -0.91
PTPRN-204ENST00000423636 CD99P14209 185 aa9.35□□□□□ -0.91
PTPRN-204ENST00000423636 DMRTA1Q5VZB9 504 aa9.35□□□□□ -0.91
PTPRN-204ENST00000423636 PMCHL2Q9BQD1 86 aa9.35□□□□□ -0.91
PTPRN-204ENST00000423636 JMJD1CQ15652 2540 aa9.35□□□□□ -0.91
PTPRN-204ENST00000423636 DDTP30046 118 aa9.34□□□□□ -0.91
PTPRN-204ENST00000423636 ERCC8Q13216 396 aa9.34□□□□□ -0.91
PTPRN-204ENST00000423636 OR11H6Q8NGC7 330 aa9.34□□□□□ -0.91
PTPRN-204ENST00000423636 DUX5Q96PT3 197 aa9.34□□□□□ -0.91
PTPRN-204ENST00000423636 CLEC5AQ9NY25 188 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms