RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 ADGRL3Q9HAR2 1447 aa0.72□□□□□ -2.29
LINC00397-201ENST00000422074 DOCK3Q8IZD9 2030 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 UBR2Q8IWV8 1755 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 DUXBA0A1W2PPF3 345 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 A0A1W2PPM0 123 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 OR2T8A6NH00 312 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 M0R378 163 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 NUPR1O60356 82 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 CXCL8P10145 99 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 CAPZBP47756 277 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 DSCR4P56555 118 aaPredicted RBP0.71□□□□□ -2.3
LINC00397-201ENST00000422074 BASP1P80723 227 aaKnown RBP0.71□□□□□ -2.3
LINC00397-201ENST00000422074 SCGB2B2Q4G0G5 96 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 OR4K15Q8NH41 348 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 PPTC7Q8NI37 304 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 POP5Q969H6 163 aaKnown RBP0.71□□□□□ -2.3
LINC00397-201ENST00000422074 TEX37Q96LM6 180 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 PBDC1Q9BVG4 233 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 OR2J1Q9GZK6 312 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 STOML2Q9UJZ1 356 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 SSR3Q9UNL2 185 aa0.71□□□□□ -2.3
LINC00397-201ENST00000422074 CEP164Q9UPV0 1460 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 E7EUB6 86 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 H7C1C5 153 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 IFNA14P01570 189 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 IFNA4P05014 189 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 COX7CP15954 63 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 PHBP35232 272 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 RAB5CP51148 216 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 EFNA4P52798 201 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 LCN6P62502 163 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 GNG5P63218 68 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 AKR1C8PQ5T2L2 129 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 Q8N6K4 173 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 RAB37Q96AX2 223 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 ZHX1-C8orf76Q96EF9 292 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 TMEM70Q9BUB7 260 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 GGACTQ9BVM4 153 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 MAP1LC3BQ9GZQ8 125 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 PSTPIP2Q9H939 334 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 POPDC3Q9HBV1 291 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 NUP98P52948 1817 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 MYH10P35580 1976 aa0.7□□□□□ -2.3
LINC00397-201ENST00000422074 TNRC6AQ8NDV7 1962 aaKnown RBP0.7□□□□□ -2.3
LINC00397-201ENST00000422074 SCN3AQ9NY46 2000 aa0.69□□□□□ -2.3
LINC00397-201ENST00000422074 CAMSAP2Q08AD1 1489 aa0.69□□□□□ -2.3
LINC00397-201ENST00000422074 CECR2Q9BXF3 1484 aa0.69□□□□□ -2.3
LINC00397-201ENST00000422074 RIIAD1A6NNX1 92 aa0.69□□□□□ -2.3
LINC00397-201ENST00000422074 C1QBP02746 253 aa0.69□□□□□ -2.3
LINC00397-201ENST00000422074 CRHP06850 196 aa0.69□□□□□ -2.3
LINC00397-201ENST00000422074 PPP1R2P41236 205 aa0.69□□□□□ -2.3
LINC00397-201ENST00000422074 VBP1P61758 197 aa0.69□□□□□ -2.3
LINC00397-201ENST00000422074 ARF6P62330 175 aa0.69□□□□□ -2.3
LINC00397-201ENST00000422074 SNCBQ16143 134 aa0.69□□□□□ -2.3
LINC00397-201ENST00000422074 DHRS4L2Q6PKH6 230 aa0.69□□□□□ -2.3
LINC00397-201ENST00000422074 CROCCP2Q86T23 111 aa0.69□□□□□ -2.3
LINC00397-201ENST00000422074 OR5AS1Q8N127 324 aa0.69□□□□□ -2.3
LINC00397-201ENST00000422074 OR13C6PQ8NH95 151 aa0.69□□□□□ -2.3
LINC00397-201ENST00000422074 CHCHD1Q96BP2 118 aaKnown RBP0.69□□□□□ -2.3
LINC00397-201ENST00000422074 LYRM2Q9NU23 88 aaPredicted RBP0.69□□□□□ -2.3
LINC00397-201ENST00000422074 PRNDQ9UKY0 176 aa0.69□□□□□ -2.3
LINC00397-201ENST00000422074 NUP210LQ5VU65 1888 aa0.69□□□□□ -2.3
LINC00397-201ENST00000422074 COL1A1P02452 1464 aaPredicted RBP0.68□□□□□ -2.3
LINC00397-201ENST00000422074 MYLKQ15746 1914 aa0.68□□□□□ -2.3
LINC00397-201ENST00000422074 TMBIM6P55061 237 aa0.68□□□□□ -2.3
LINC00397-201ENST00000422074 RPL19P84098 196 aaKnown RBP0.68□□□□□ -2.3
LINC00397-201ENST00000422074 KLRD1Q13241 179 aa0.68□□□□□ -2.3
LINC00397-201ENST00000422074 C1orf134Q5TEV5 83 aa0.68□□□□□ -2.3
LINC00397-201ENST00000422074 PSMF1Q92530 271 aa0.68□□□□□ -2.3
LINC00397-201ENST00000422074 PAIP2Q9BPZ3 127 aaKnown RBP0.68□□□□□ -2.3
LINC00397-201ENST00000422074 IFNA1P01562 189 aa0.67□□□□□ -2.3
LINC00397-201ENST00000422074 IGLV3-1P01715 115 aa0.67□□□□□ -2.3
LINC00397-201ENST00000422074 TRGC2P03986 189 aa0.67□□□□□ -2.3
LINC00397-201ENST00000422074 CXCL1P09341 107 aa0.67□□□□□ -2.3
LINC00397-201ENST00000422074 OGNP20774 298 aaKnown RBP0.67□□□□□ -2.3
LINC00397-201ENST00000422074 ARPP19P56211 112 aa0.67□□□□□ -2.3
LINC00397-201ENST00000422074 LINC00575Q6W349 94 aa0.67□□□□□ -2.3
LINC00397-201ENST00000422074 SBSPONQ8IVN8 264 aa0.67□□□□□ -2.3
LINC00397-201ENST00000422074 EXOC3-AS1Q8N2X6 119 aa0.67□□□□□ -2.3
LINC00397-201ENST00000422074 LRRC18Q8N456 261 aa0.67□□□□□ -2.3
LINC00397-201ENST00000422074 Q8TAT8 98 aa0.67□□□□□ -2.3
LINC00397-201ENST00000422074 MALSU1Q96EH3 234 aa0.67□□□□□ -2.3
LINC00397-201ENST00000422074 HYLS1Q96M11 299 aa0.67□□□□□ -2.3
LINC00397-201ENST00000422074 NCOA6Q14686 2063 aaPredicted RBP0.67□□□□□ -2.3
LINC00397-201ENST00000422074 ALPK3Q96L96 1907 aa0.67□□□□□ -2.3
LINC00397-201ENST00000422074 PHRF1Q9P1Y6 1649 aaKnown RBP0.67□□□□□ -2.3
LINC00397-201ENST00000422074 SCN8AQ9UQD0 1980 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 SIP14410 1827 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 PIK3C2AO00443 1686 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 TRAV27A0A087WT01 109 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 B4DSR2 109 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 K7ERJ3 54 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 HIST1H2BKO60814 126 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 PPYP01298 95 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 HIST1H2BJP06899 126 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 PATE2Q6UY27 113 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 ARPINQ7Z6K5 226 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 TMED4Q7Z7H5 227 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 LYSMD1Q96S90 227 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 GINS3Q9BRX5 216 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms