RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 UNQ6494/PRO21346Q6UXR6 183 aa11.93□□□□□ -0.5
AP000550.1-201ENST00000420508 SEC11AP67812 179 aa11.93□□□□□ -0.5
AP000550.1-201ENST00000420508 CR1LQ2VPA4 569 aa11.93□□□□□ -0.5
AP000550.1-201ENST00000420508 ZNF134P52741 427 aa11.93□□□□□ -0.5
AP000550.1-201ENST00000420508 ZNF114Q8NC26 417 aa11.93□□□□□ -0.5
AP000550.1-201ENST00000420508 EXOC3-AS1Q8N2X6 119 aa11.93□□□□□ -0.5
AP000550.1-201ENST00000420508 IGHV3-66A0A0C4DH42 116 aa11.92□□□□□ -0.5
AP000550.1-201ENST00000420508 RNASE4P34096 147 aaKnown RBP11.92□□□□□ -0.5
AP000550.1-201ENST00000420508 KLRD1Q13241 179 aa11.92□□□□□ -0.5
AP000550.1-201ENST00000420508 IFI27L1Q96BM0 104 aa11.92□□□□□ -0.5
AP000550.1-201ENST00000420508 LSM4Q9Y4Z0 139 aaKnown RBP11.92□□□□□ -0.5
AP000550.1-201ENST00000420508 C2orf88Q9BSF0 95 aa11.92□□□□□ -0.5
AP000550.1-201ENST00000420508 TMEM160Q9NX00 188 aa11.92□□□□□ -0.5
AP000550.1-201ENST00000420508 C14orf144Q96I85 54 aa11.92□□□□□ -0.5
AP000550.1-201ENST00000420508 IGHV3-49A0A0A0MS15 119 aa11.92□□□□□ -0.5
AP000550.1-201ENST00000420508 UQCRFS1P47985 274 aa11.92□□□□□ -0.5
AP000550.1-201ENST00000420508 CYSLTR1Q9Y271 337 aa11.92□□□□□ -0.5
AP000550.1-201ENST00000420508 CNOT1A5YKK6 2376 aaKnown RBP11.91□□□□□ -0.5
AP000550.1-201ENST00000420508 IGHV2-70DA0A0C4DH43 119 aa11.91□□□□□ -0.5
AP000550.1-201ENST00000420508 CD24P25063 80 aa11.91□□□□□ -0.5
AP000550.1-201ENST00000420508 ALKBH7Q9BT30 221 aaPredicted RBP11.91□□□□□ -0.5
AP000550.1-201ENST00000420508 SH2D1AO60880 128 aa11.91□□□□□ -0.5
AP000550.1-201ENST00000420508 CA1P00915 261 aaPredicted RBP11.91□□□□□ -0.5
AP000550.1-201ENST00000420508 GEMIN7Q9H840 131 aaKnown RBP11.91□□□□□ -0.5
AP000550.1-201ENST00000420508 TRBV19A0A075B6N1 114 aa11.91□□□□□ -0.5
AP000550.1-201ENST00000420508 LCN12Q6JVE5 192 aa11.91□□□□□ -0.5
AP000550.1-201ENST00000420508 DKK4Q9UBT3 224 aa11.91□□□□□ -0.5
AP000550.1-201ENST00000420508 SMIM27A0A1W2PRY6 76 aa11.9□□□□□ -0.5
AP000550.1-201ENST00000420508 H3BRM9 83 aa11.9□□□□□ -0.5
AP000550.1-201ENST00000420508 FAM74A4Q5TZK3 123 aa11.9□□□□□ -0.5
AP000550.1-201ENST00000420508 H3BRN7 92 aa11.9□□□□□ -0.5
AP000550.1-201ENST00000420508 PTPRSQ13332 1948 aa11.9□□□□□ -0.5
AP000550.1-201ENST00000420508 C5orf30Q96GV9 206 aa11.9□□□□□ -0.5
AP000550.1-201ENST00000420508 C20orf144Q9BQM9 153 aa11.9□□□□□ -0.5
AP000550.1-201ENST00000420508 DCAF16Q9NXF7 216 aa11.9□□□□□ -0.5
AP000550.1-201ENST00000420508 MRPS16Q9Y3D3 137 aaKnown RBP11.9□□□□□ -0.5
AP000550.1-201ENST00000420508 WT1-ASQ06250 92 aa11.9□□□□□ -0.51
AP000550.1-201ENST00000420508 ARL6IP6Q8N6S5 226 aa11.9□□□□□ -0.51
AP000550.1-201ENST00000420508 V9GYV3 84 aa11.9□□□□□ -0.51
AP000550.1-201ENST00000420508 NCOR1O75376 2440 aa11.9□□□□□ -0.51
AP000550.1-201ENST00000420508 MMP23AO75900 390 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 PLP1P60201 277 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 LY6DQ14210 128 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 LYZL1Q6UWQ5 148 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 ZNF418Q8TF45 676 aaPredicted RBP11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 K7EM74 188 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 HSD52Q0P140 79 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 PYGO2Q9BRQ0 406 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 IGHV3-11P01762 117 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 LAGE3Q14657 143 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 LDLRAD2Q5SZI1 272 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 C18orf15Q96N68 181 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 C11orf1Q9H5F2 150 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 LOC102724200A0A096LPH7 203 aaPredicted RBP11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 H3BUA1 57 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 GZMBP10144 247 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 SAA4P35542 130 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 TMEM256Q8N2U0 113 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 DUX3Q96PT4 197 aa11.89□□□□□ -0.51
AP000550.1-201ENST00000420508 IGKV2-40A0A087WW87 121 aaPredicted RBP11.88□□□□□ -0.51
AP000550.1-201ENST00000420508 IGKV2D-40P01614 121 aaPredicted RBP11.88□□□□□ -0.51
AP000550.1-201ENST00000420508 IGHV2-70P01814 119 aa11.88□□□□□ -0.51
AP000550.1-201ENST00000420508 VCX2Q9H322 139 aa11.88□□□□□ -0.51
AP000550.1-201ENST00000420508 KIAA2026Q5HYC2 2103 aa11.88□□□□□ -0.51
AP000550.1-201ENST00000420508 SHISA9B4DS77 424 aa11.88□□□□□ -0.51
AP000550.1-201ENST00000420508 GGTLC3B5MD39 225 aa11.88□□□□□ -0.51
AP000550.1-201ENST00000420508 IGKCP01834 107 aa11.88□□□□□ -0.51
AP000550.1-201ENST00000420508 KLF2Q9Y5W3 355 aaPredicted RBP11.88□□□□□ -0.51
AP000550.1-201ENST00000420508 EP300Q09472 2414 aaPredicted RBP11.88□□□□□ -0.51
AP000550.1-201ENST00000420508 PRSS46E5RG02 174 aa11.88□□□□□ -0.51
AP000550.1-201ENST00000420508 PRSS33Q8NF86 280 aa11.88□□□□□ -0.51
AP000550.1-201ENST00000420508 WIPF2Q8TF74 440 aaPredicted RBP11.88□□□□□ -0.51
AP000550.1-201ENST00000420508 KLK15Q9H2R5 256 aa11.88□□□□□ -0.51
AP000550.1-201ENST00000420508 DPH3P1Q9H4G8 78 aa11.88□□□□□ -0.51
AP000550.1-201ENST00000420508 LINC01356Q8N9X3 169 aa11.87□□□□□ -0.51
AP000550.1-201ENST00000420508 TMEM101Q96IK0 257 aa11.87□□□□□ -0.51
AP000550.1-201ENST00000420508 CD7P09564 240 aa11.87□□□□□ -0.51
AP000550.1-201ENST00000420508 C3orf79P0CE67 100 aa11.87□□□□□ -0.51
AP000550.1-201ENST00000420508 GNLYP22749 145 aa11.87□□□□□ -0.51
AP000550.1-201ENST00000420508 MLANAQ16655 118 aa11.87□□□□□ -0.51
AP000550.1-201ENST00000420508 COA6Q5JTJ3 125 aaKnown RBP11.87□□□□□ -0.51
AP000550.1-201ENST00000420508 HAX1O00165 279 aa11.87□□□□□ -0.51
AP000550.1-201ENST00000420508 OR11H6Q8NGC7 330 aa11.87□□□□□ -0.51
AP000550.1-201ENST00000420508 A6NNC1 897 aa11.86□□□□□ -0.51
AP000550.1-201ENST00000420508 J3QLI3 93 aa11.86□□□□□ -0.51
AP000550.1-201ENST00000420508 IFI27P40305 119 aaPredicted RBP11.86□□□□□ -0.51
AP000550.1-201ENST00000420508 RPL15P61313 204 aaKnown RBP11.86□□□□□ -0.51
AP000550.1-201ENST00000420508 GUSBP1Q15486 140 aa11.86□□□□□ -0.51
AP000550.1-201ENST00000420508 D6R8Y8 96 aa11.86□□□□□ -0.51
AP000550.1-201ENST00000420508 PRB3Q04118 309 aaPredicted RBP11.86□□□□□ -0.51
AP000550.1-201ENST00000420508 ESPL1Q14674 2120 aa11.86□□□□□ -0.51
AP000550.1-201ENST00000420508 PSMB11A5LHX3 300 aa11.86□□□□□ -0.51
AP000550.1-201ENST00000420508 IGLC1P0CG04 106 aa11.86□□□□□ -0.51
AP000550.1-201ENST00000420508 BPESC1Q9GZL8 116 aa11.86□□□□□ -0.51
AP000550.1-201ENST00000420508 SYS1-DBNDD2H3BUS1 97 aa11.86□□□□□ -0.51
AP000550.1-201ENST00000420508 TMEM170BQ5T4T1 132 aa11.86□□□□□ -0.51
AP000550.1-201ENST00000420508 LINC00469Q8N7U9 141 aa11.86□□□□□ -0.51
AP000550.1-201ENST00000420508 TRAV8-6A0A0B4J262 113 aa11.85□□□□□ -0.51
AP000550.1-201ENST00000420508 IGHV1-69DA0A0B4J2H0 117 aa11.85□□□□□ -0.51
AP000550.1-201ENST00000420508 H3BUX3 64 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms