RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 RAB11AP62491 216 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 USF2Q15853 346 aaPredicted RBP5.1□□□□□ -1.59
HMGN1-205ENST00000419378 APRG1Q8IVJ8 170 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 OR4D5Q8NGN0 318 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 MITD1Q8WV92 249 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 S100ZQ8WXG8 99 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 GRAMD2BQ96HH9 432 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 NARS2Q96I59 477 aaKnown RBP5.1□□□□□ -1.59
HMGN1-205ENST00000419378 MS4A6AQ9H2W1 248 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 PAIP2BQ9ULR5 123 aaKnown RBP5.1□□□□□ -1.59
HMGN1-205ENST00000419378 TRAV6A0A075B6T7 132 aa5.09□□□□□ -1.59
HMGN1-205ENST00000419378 ZFP92A6NM28 416 aa5.09□□□□□ -1.59
HMGN1-205ENST00000419378 PRSS46E5RG02 174 aa5.09□□□□□ -1.59
HMGN1-205ENST00000419378 DNASE2O00115 360 aaPredicted RBP5.09□□□□□ -1.59
HMGN1-205ENST00000419378 SSSCA1O60232 199 aa5.09□□□□□ -1.59
HMGN1-205ENST00000419378 RPL35AP18077 110 aaKnown RBP5.09□□□□□ -1.59
HMGN1-205ENST00000419378 NKX2-1P43699 371 aaPredicted RBP5.09□□□□□ -1.59
HMGN1-205ENST00000419378 CMC4P56277 68 aaPredicted RBP5.09□□□□□ -1.59
HMGN1-205ENST00000419378 POLR2GP62487 172 aaKnown RBP eCLIP5.09□□□□□ -1.59
HMGN1-205ENST00000419378 PAFAH1B2P68402 229 aa5.09□□□□□ -1.59
HMGN1-205ENST00000419378 ZNF90Q03938 601 aa5.09□□□□□ -1.59
HMGN1-205ENST00000419378 SPANXN5Q5MJ07 72 aa5.09□□□□□ -1.59
HMGN1-205ENST00000419378 FAM24BQ8N5W8 94 aa5.09□□□□□ -1.59
HMGN1-205ENST00000419378 STXBP6Q8NFX7 210 aa5.09□□□□□ -1.59
HMGN1-205ENST00000419378 OR51G1Q8NGK1 321 aa5.09□□□□□ -1.59
HMGN1-205ENST00000419378 OVOL2Q9BRP0 275 aa5.09□□□□□ -1.59
HMGN1-205ENST00000419378 NUDT15Q9NV35 164 aa5.09□□□□□ -1.59
HMGN1-205ENST00000419378 PTTG2Q9NZH5 202 aa5.09□□□□□ -1.59
HMGN1-205ENST00000419378 RABAC1Q9UI14 185 aa5.09□□□□□ -1.59
HMGN1-205ENST00000419378 TBC1D24Q9ULP9 559 aa5.09□□□□□ -1.59
HMGN1-205ENST00000419378 DNAH1Q9P2D7 4330 aa5.09□□□□□ -1.6
HMGN1-205ENST00000419378 IGKV1OR2-108A0A075B7D4 117 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 KIR2DL5BA0A0G2JN68 375 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 KIR2DL5BA0A0G2JPC4 375 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 FAM240BA0A1B0GVZ2 78 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 HELTA6NFD8 242 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 K7EQG2 157 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 CCSO14618 274 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 BUB3O43684 328 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 FABP1P07148 127 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 EIF2B2P49770 351 aaKnown RBP5.08□□□□□ -1.6
HMGN1-205ENST00000419378 DEFB131AP59861 70 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 ASAH1Q13510 395 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 IAH1Q2TAA2 248 aaPredicted RBP5.08□□□□□ -1.6
HMGN1-205ENST00000419378 DEFB135Q30KP9 77 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 CASC10Q5T4H9 136 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 LEMD1Q68G75 181 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 PQLC2Q6ZP29 291 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 ACOT7LQ6ZUV0 252 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 KIR2DL5AQ8N109 375 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 THAP8Q8NA92 274 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 ZBTB8BQ8NAP8 495 aaPredicted RBP5.08□□□□□ -1.6
HMGN1-205ENST00000419378 KIR2DL5BQ8NHK3 375 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 DCANP1Q8TF63 244 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 TRGV9Q99603 122 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 SEC22CQ9BRL7 303 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 PBDC1Q9BVG4 233 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 STRAPQ9Y3F4 350 aaKnown RBP5.08□□□□□ -1.6
HMGN1-205ENST00000419378 TENM2Q9NT68 2774 aa5.08□□□□□ -1.6
HMGN1-205ENST00000419378 SNRPGP15A8MWD9 76 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 UBE2CO00762 179 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 VCYO14598 125 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 UPK1BO75841 260 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 ZNF688P0C7X2 276 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 NUP62P37198 522 aaPredicted RBP5.07□□□□□ -1.6
HMGN1-205ENST00000419378 AP2S1P53680 142 aaPredicted RBP5.07□□□□□ -1.6
HMGN1-205ENST00000419378 PAX9P55771 341 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 LYZP61626 148 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 AKR1C1Q04828 323 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 OR2F1Q13607 317 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 ZNF846Q147U1 533 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 TWIST1Q15672 202 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 ZFAND6Q6FIF0 208 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 OR8G2PQ6IF36 304 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 SIGLEC15Q6ZMC9 328 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 ZNF431Q8TF32 576 aaPredicted RBP5.07□□□□□ -1.6
HMGN1-205ENST00000419378 SMIM8Q96KF7 97 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 LYSTQ99698 3801 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 PSENENQ9NZ42 101 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 GSKIPQ9P0R6 139 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 FBXL17Q9UF56 701 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 TP53TG1Q9Y2A0 90 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 RCL1Q9Y2P8 373 aaKnown RBP5.07□□□□□ -1.6
HMGN1-205ENST00000419378 PAM16Q9Y3D7 125 aa5.07□□□□□ -1.6
HMGN1-205ENST00000419378 ALMS1Q8TCU4 4167 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 IGHV4-28A0A0C4DH34 117 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 SMCO3A2RU48 225 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 PMS2P5A8MQ11 134 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 FAM25EA8MYX2 175 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 TSC22D2O75157 780 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 CCNKO75909 580 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 CFDP00746 253 aaPredicted RBP5.06□□□□□ -1.6
HMGN1-205ENST00000419378 METTL15P1P0C7V9 234 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 CAMPP49913 170 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 TAS2R30P59541 319 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 IFITM3Q01628 133 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 TMEM14EPQ6UXP3 125 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 TMEM144Q7Z5S9 345 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 C12orf45Q8N5I9 185 aaPredicted RBP5.06□□□□□ -1.6
HMGN1-205ENST00000419378 NEXN-AS1Q8NBZ9 246 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms