RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 IGFL3Q6UXB1 125 aa10.78□□□□□ -0.68
BDNF-208ENST00000418212 PRELID3AQ96N28 172 aa10.78□□□□□ -0.68
BDNF-208ENST00000418212 ALPK3Q96L96 1907 aa10.78□□□□□ -0.68
BDNF-208ENST00000418212 PSMB11A5LHX3 300 aa10.77□□□□□ -0.68
BDNF-208ENST00000418212 BUB1B-PAK6H3BSN5 160 aa10.77□□□□□ -0.68
BDNF-208ENST00000418212 APOHP02749 345 aaPredicted RBP10.77□□□□□ -0.68
BDNF-208ENST00000418212 C5orf64Q2M2E5 130 aa10.77□□□□□ -0.68
BDNF-208ENST00000418212 ST6GALNAC6Q969X2 333 aa10.77□□□□□ -0.68
BDNF-208ENST00000418212 RAB37Q96AX2 223 aa10.77□□□□□ -0.68
BDNF-208ENST00000418212 PSG8Q9UQ74 426 aa10.77□□□□□ -0.68
BDNF-208ENST00000418212 SERF1AO75920 110 aa10.77□□□□□ -0.69
BDNF-208ENST00000418212 EMP1P54849 157 aa10.77□□□□□ -0.69
BDNF-208ENST00000418212 Q6ZS49 121 aa10.77□□□□□ -0.69
BDNF-208ENST00000418212 OR4X2Q8NGF9 303 aa10.77□□□□□ -0.69
BDNF-208ENST00000418212 NPIPB6E9PJ23 425 aa10.77□□□□□ -0.69
BDNF-208ENST00000418212 ITGB1BP1O14713 200 aa10.77□□□□□ -0.69
BDNF-208ENST00000418212 NDUFS7O75251 213 aa10.77□□□□□ -0.69
BDNF-208ENST00000418212 GCSHP23434 173 aa10.77□□□□□ -0.69
BDNF-208ENST00000418212 GRNP28799 593 aaKnown RBP10.77□□□□□ -0.69
BDNF-208ENST00000418212 CEACAM8P31997 349 aaPredicted RBP10.77□□□□□ -0.69
BDNF-208ENST00000418212 NDPQ00604 133 aa10.77□□□□□ -0.69
BDNF-208ENST00000418212 PVRIGQ6DKI7 326 aa10.77□□□□□ -0.69
BDNF-208ENST00000418212 TMEM256Q8N2U0 113 aa10.77□□□□□ -0.69
BDNF-208ENST00000418212 TMEM170AQ8WVE7 144 aa10.77□□□□□ -0.69
BDNF-208ENST00000418212 FER1L6-AS1Q8NA97 138 aa10.77□□□□□ -0.69
BDNF-208ENST00000418212 LAMTOR2Q9Y2Q5 125 aa10.77□□□□□ -0.69
BDNF-208ENST00000418212 RNASE4P34096 147 aaKnown RBP10.76□□□□□ -0.69
BDNF-208ENST00000418212 PMCHL1Q16048 86 aa10.76□□□□□ -0.69
BDNF-208ENST00000418212 CIARTQ8N365 385 aaPredicted RBP10.76□□□□□ -0.69
BDNF-208ENST00000418212 LINC00479Q96M42 142 aa10.76□□□□□ -0.69
BDNF-208ENST00000418212 POLR3KQ9Y2Y1 108 aaPredicted RBP10.76□□□□□ -0.69
BDNF-208ENST00000418212 PLXNB3Q9ULL4 1909 aa10.76□□□□□ -0.69
BDNF-208ENST00000418212 EML6Q6ZMW3 1958 aa10.76□□□□□ -0.69
BDNF-208ENST00000418212 ADAMTS9Q9P2N4 1935 aa10.76□□□□□ -0.69
BDNF-208ENST00000418212 FAM181BA6NEQ2 426 aa10.76□□□□□ -0.69
BDNF-208ENST00000418212 TEX29Q8N6K0 151 aa10.76□□□□□ -0.69
BDNF-208ENST00000418212 ASCL2Q99929 193 aa10.76□□□□□ -0.69
BDNF-208ENST00000418212 TRAV8-6A0A0B4J262 113 aa10.76□□□□□ -0.69
BDNF-208ENST00000418212 SAA4P35542 130 aa10.76□□□□□ -0.69
BDNF-208ENST00000418212 RPL13AP40429 203 aaKnown RBP10.76□□□□□ -0.69
BDNF-208ENST00000418212 TCF15Q12870 199 aa10.76□□□□□ -0.69
BDNF-208ENST00000418212 KIR2DL4Q99706 377 aa10.76□□□□□ -0.69
BDNF-208ENST00000418212 TRBV9A0A0B4J1U6 114 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 FABP5P3A8MUU1 101 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 LMO1P25800 156 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 CFPP27918 469 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 PAX8Q06710 450 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 PRSS22Q9GZN4 317 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 OTORQ9NRC9 128 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 TMEM160Q9NX00 188 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 PLA2G2EQ9NZK7 142 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 TRAV41A0A0B4J266 112 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 FAM90A9PA6NNJ1 464 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 IGKV1-39P01597 117 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 IGKV1D-39P04432 117 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 CNTFRP26992 372 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 FAM169BQ8N8A8 192 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 ZNF418Q8TF45 676 aaPredicted RBP10.75□□□□□ -0.69
BDNF-208ENST00000418212 ERVK11-1P61568 191 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 LINC01551Q86U37 167 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 C8orf46Q8TAG6 207 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 DEFB104AQ8WTQ1 72 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 FMC1Q96HJ9 113 aa10.75□□□□□ -0.69
BDNF-208ENST00000418212 NUP210Q8TEM1 1887 aaPredicted RBP10.74□□□□□ -0.69
BDNF-208ENST00000418212 A0A1B0GUS0 222 aa10.74□□□□□ -0.69
BDNF-208ENST00000418212 A0A1W2PPI3 338 aa10.74□□□□□ -0.69
BDNF-208ENST00000418212 DKK1O94907 266 aa10.74□□□□□ -0.69
BDNF-208ENST00000418212 IGKV2-40A0A087WW87 121 aaPredicted RBP10.74□□□□□ -0.69
BDNF-208ENST00000418212 IGKV2D-40P01614 121 aaPredicted RBP10.74□□□□□ -0.69
BDNF-208ENST00000418212 RNASE2P10153 161 aaKnown RBP10.74□□□□□ -0.69
BDNF-208ENST00000418212 ASIPP42127 132 aa10.74□□□□□ -0.69
BDNF-208ENST00000418212 ZNF134P52741 427 aa10.74□□□□□ -0.69
BDNF-208ENST00000418212 SLC25A34Q6PIV7 304 aa10.74□□□□□ -0.69
BDNF-208ENST00000418212 Q8TAT8 98 aa10.74□□□□□ -0.69
BDNF-208ENST00000418212 CITED1Q99966 193 aa10.74□□□□□ -0.69
BDNF-208ENST00000418212 SLC25A39Q9BZJ4 359 aaPredicted RBP10.74□□□□□ -0.69
BDNF-208ENST00000418212 ZNF256Q9Y2P7 627 aaPredicted RBP10.74□□□□□ -0.69
BDNF-208ENST00000418212 TRIOO75962 3097 aa10.74□□□□□ -0.69
BDNF-208ENST00000418212 LYL1P12980 280 aa10.74□□□□□ -0.69
BDNF-208ENST00000418212 TMEM70Q9BUB7 260 aa10.74□□□□□ -0.69
BDNF-208ENST00000418212 WDFY3Q8IZQ1 3526 aa10.74□□□□□ -0.69
BDNF-208ENST00000418212 B4DSR2 109 aa10.73□□□□□ -0.69
BDNF-208ENST00000418212 RNF166Q96A37 237 aaPredicted RBP10.73□□□□□ -0.69
BDNF-208ENST00000418212 IGLV3-9A0A075B6K5 115 aa10.73□□□□□ -0.69
BDNF-208ENST00000418212 A6NDN8 102 aa10.73□□□□□ -0.69
BDNF-208ENST00000418212 CD7P09564 240 aa10.73□□□□□ -0.69
BDNF-208ENST00000418212 PRTN3P24158 256 aa10.73□□□□□ -0.69
BDNF-208ENST00000418212 ADMP35318 185 aa10.73□□□□□ -0.69
BDNF-208ENST00000418212 SAMD13Q5VXD3 122 aa10.73□□□□□ -0.69
BDNF-208ENST00000418212 LOC107984156A0A0G2JMH3 177 aa10.73□□□□□ -0.69
BDNF-208ENST00000418212 NBL1P41271 181 aa10.73□□□□□ -0.69
BDNF-208ENST00000418212 DIAPH2-AS1Q14236 149 aa10.73□□□□□ -0.69
BDNF-208ENST00000418212 ARL17AQ8IVW1 177 aa10.73□□□□□ -0.69
BDNF-208ENST00000418212 CFAP54Q96N23 3096 aa10.73□□□□□ -0.69
BDNF-208ENST00000418212 NPFFO15130 113 aa10.73□□□□□ -0.69
BDNF-208ENST00000418212 ZNF688P0C7X2 276 aa10.73□□□□□ -0.69
BDNF-208ENST00000418212 GAGE1Q13065 139 aa10.73□□□□□ -0.69
BDNF-208ENST00000418212 RNASE8Q8TDE3 154 aaKnown RBP10.73□□□□□ -0.69
BDNF-208ENST00000418212 ZNF414Q96IQ9 312 aa10.73□□□□□ -0.69
BDNF-208ENST00000418212 DUX3Q96PT4 197 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms