RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 RHOGP84095 191 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 ATP5G2Q06055 141 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 ATP6V1FQ16864 119 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 LAMTOR1Q6IAA8 161 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 ETFRF1Q6IPR1 90 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 C10orf99Q6UWK7 81 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 SLC16A13Q7RTY0 426 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 FAM223AQ8IWN6 122 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 C9orf62Q8N4C0 152 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 COMMD1Q8N668 190 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 OR5AU1Q8NGC0 362 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 OR10G8Q8NGN5 311 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 VN1R17PQ8TDU5 208 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 CACNG8Q8WXS5 425 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 ALKBH7Q9BT30 221 aaPredicted RBP4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 SMIM3Q9BZL3 60 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 ARL6Q9H0F7 186 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 FNDC4Q9H6D8 234 aaPredicted RBP4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 WFDC1Q9HC57 220 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 THYN1Q9P016 225 aa4.48□□□□□ -1.69
NIFKP3-201ENST00000417799 KANTRA0A1W2PQU2 76 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 FNDC10F2Z333 226 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 IFNA5P01569 189 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 CFC1BP0CG36 223 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 CFC1P0CG37 223 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 RPL35AP18077 110 aaKnown RBP4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 MDKP21741 143 aaPredicted RBP4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 TPPP2P59282 170 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 KIAA0141Q14154 515 aaPredicted RBP4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 GAMTQ14353 236 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 CLINT1Q14677 625 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 C15orf32Q32M92 178 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 OR4X2Q8NGF9 303 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 USMG5Q96IX5 58 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 SLC35E1Q96K37 410 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 CXorf58Q96LI9 332 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 ATP5SQ99766 215 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 TMEM147Q9BVK8 224 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 KRTAP1-5Q9BYS1 174 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 UQCC1Q9NVA1 299 aa4.47□□□□□ -1.69
NIFKP3-201ENST00000417799 TRBV7-1A0A0A6YYK4 115 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 BORCS7-ASMTA0A0B4J1R7 106 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 A0A0G2JLM5 398 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 SMCO3A2RU48 225 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 MFSD2BA6NFX1 497 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 BCL2L11O43521 198 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 IGHV3-48P01763 117 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 C4BPBP20851 252 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 FCGR2BP31994 310 aaPredicted RBP4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 RND2P52198 227 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 DEFA5Q01523 94 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 AKR1C1Q04828 323 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 ZNF266Q14584 549 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 TCTEX1D4Q5JR98 221 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 RPL7L1Q6DKI1 246 aaKnown RBP4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 TMEM144Q7Z5S9 345 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 ZNF491Q8N8L2 437 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 OR4X1Q8NH49 305 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 ZNF502Q8TBZ5 544 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 SCGB1C1Q8TD33 95 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 MYOZ3Q8TDC0 251 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 GATAD1Q8WUU5 269 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 EEF1AKMT3Q96AZ1 226 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 ACY3Q96HD9 319 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 ATP6V0BQ99437 205 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 LITAFQ99732 161 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 TXN2Q99757 166 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 ZNF471Q9BX82 626 aaPredicted RBP4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 PARD6GQ9BYG4 376 aaPredicted RBP4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 NPVFQ9HCQ7 196 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 CYTL1Q9NRR1 136 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 C21orf62Q9NYP8 219 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 MRPL36Q9P0J6 103 aaKnown RBP4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 S4R3C0 116 aa4.46□□□□□ -1.7
NIFKP3-201ENST00000417799 NIPBLQ6KC79 2804 aaeCLIP4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 SETD2Q9BYW2 2564 aaPredicted RBP4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 NF1P21359 2839 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 IGKV1D-37A0A075B6S9 117 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 IGKV1OR2-108A0A075B7D4 117 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 TRAV30A0A087WSZ9 112 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 UBE2L5PA0A1B0GUS4 154 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 TCRBV4S1A1TA0A5B7 111 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 OR2T8A6NH00 312 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 MPDU1O75352 247 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 CLN5O75503 358 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 IGHV3-11P01762 117 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 IGHV3-23P01764 117 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 CD28P10747 220 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 OR10J1P30954 320 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 EIF5AP63241 154 aaKnown RBP4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 RAB31Q13636 194 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 Q56UQ5 140 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 ZNF343Q6P1L6 599 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 SLC51BQ86UW2 128 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 UBAC2Q8NBM4 344 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 UBE2E2Q96LR5 201 aa4.45□□□□□ -1.7
NIFKP3-201ENST00000417799 TRGV9Q99603 122 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms